Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47120 196 / 5e-63 ATBI-1, ATBI1 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) AT4G17580 130 / 1e-37 Bax inhibitor-1 family protein (.1) AT5G47130 115 / 2e-32 Bax inhibitor-1 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000589 [exp] 322 / 3e-112 AT5G47120 339 / 2e-118 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Lus10011006 [exp] 280 / 1e-95 AT5G47120 333 / 5e-116 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G151800 [exp] 197 / 9e-64 AT5G47120 310 / 2e-107 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Potri.003G082700 [exp] 191 / 4e-61 AT5G47120 300 / 3e-103 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0453 [flax] [poplar] Apoptosis-Inhib PF01027 [flax] [poplar] Bax1-I Inhibitor of apoptosis-promoting Bax1
Representative CDS sequence Show only first row Show all	>Lus10000097 pacid=23180894 polypeptide=Lus10000097 locus=Lus10000097.g ID=Lus10000097.BGIv1.0 annot-version=v1.0 ATGGGCTGTATGGTCTGGCTTCTGGCGACCCCTCCACATCAAGAGCAAAAGAGAGTCTCCCTTCTGATGGCAGCTGGGTTGTTCGAGGGCGCTACCATCG GTCCTCTCATCGAGCTGGCAATCGATGTTGATCCAAGTCTCCTGATCACCGCCTTTGTGGGAACAGCAATCGCTTTCGGTTGCTTCTCAGCAGCAGCAAT GGTGGCCAGGCGCAGGGAGTATCTCTACTTGGCTGGCTTGCTCTCCTCCGGCTTGTCCATCCTCTTCTGGCTTCAATTCGCATCCATGATCTTTGGTGGA TCCACAGCCCTCTTCACATTCGAGCTCTACTTTGGACTGCTGGTGTTCGTTGGCTACGTGGTGGTTGACACGCAGAACATCATCGAGCGAGCTCACCTCG GAGACCTCGACTATGTGAAGCACGCTCTTGACCTGTTCACTGACTTCATCAACGTCTTCGTCAGGATCCTCATCGTCATGGTGGGTGTTCTTCTCCCCGG TGATTGTTTCTCTCCGATTCTGTTCTCGAACTTATCGGTCGTCTTTTGTGTCTTGTTTTCGCAGTTGAAGAATTCAGAGGAGAAGAAGAAGAAGAAGAGA AGAGATTGA
AA sequence Show only first row Show all	>Lus10000097 pacid=23180894 polypeptide=Lus10000097 locus=Lus10000097.g ID=Lus10000097.BGIv1.0 annot-version=v1.0 MGCMVWLLATPPHQEQKRVSLLMAAGLFEGATIGPLIELAIDVDPSLLITAFVGTAIAFGCFSAAAMVARRREYLYLAGLLSSGLSILFWLQFASMIFGG STALFTFELYFGLLVFVGYVVVDTQNIIERAHLGDLDYVKHALDLFTDFINVFVRILIVMVGVLLPGDCFSPILFSNLSVVFCVLFSQLKNSEEKKKKKR RD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47120		ATBI-1, ATBI1	ARABIDOPSIS BAX INHIBITOR 1, B...		Lus10000097 [exp]	0	1
AT1G17730		CHMP1B, VPS46.1	CHARGED MULTIVESICULAR BODY PR...		Lus10006868 [exp]	1.4	0.8457
AT3G05500			Rubber elongation factor prote...		Lus10015171 [exp]	5.5	0.8201
AT3G07090			PPPDE putative thiol peptidase...		Lus10038168 [exp]	10.5	0.8360
AT2G46490			unknown protein		Lus10019579 [exp]	12.7	0.7598
AT4G33565			RING/U-box superfamily protein...		Lus10012745 [exp]	14.8	0.8355
AT3G62580			Late embryogenesis abundant pr...		Lus10025037 [exp]	16.3	0.7935
AT2G36320			A20/AN1-like zinc finger famil...		Lus10020594 [exp]	20.8	0.7874
AT5G60570			Galactose oxidase/kelch repeat...		Lus10037413 [exp]	22.1	0.8292
AT3G02910			AIG2-like (avirulence induced ...		Lus10040635 [exp]	23.5	0.7888
AT5G42050			DCD (Development and Cell Deat...		Lus10023059 [exp]	23.9	0.8037

Compare expression of checked genes

Lus10000097 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.