Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 278 / 2e-92 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 271 / 6e-89 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 254 / 2e-82 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 48 / 2e-06 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034846 [exp] 436 / 3e-153 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034847 [exp] 310 / 6e-104 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 307 / 6e-103 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 305 / 6e-102 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 303 / 2e-101 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 303 / 9e-101 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 310 / 5e-100 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 295 / 5e-98 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 265 / 2e-86 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 295 / 4e-98 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 282 / 3e-93 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 279 / 2e-92 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10000256 pacid=23173390 polypeptide=Lus10000256 locus=Lus10000256.g ID=Lus10000256.BGIv1.0 annot-version=v1.0 ATGGCAGACGATTCTACTGTTCCTCTGTTGAAGAAGCAATACTACGAGAATTGTCCAGGTTGCAAGGTTGACCAACGTAAAGAGTTGAACACCGGATGGC CTGTTCGGGAGCTCTTCTCTATATCGATTCTTGTCCTCTCTACAACGCTGCCAATATCTTCTCTGTTTCCTTATCTCTATTTTATGGTTAGGGACTTCGG CATTGCAACACGTGGGGAAGATATTGGTTATTATGCTGGATGCCTTGGTTCCTCATTTATGTTAGCCAGAGCTTTGACATCTGTTGTCTGGGGGCTTGTA GCTGATCGCTATGGTCGAAAGCCAGTTATAATGCTAGGAGTTTCTTTAATGGTTATCTTCAATATTCTCTTTGGCCTCAGCGTGAACTTTTGGATGGCAA TTAGCATGAGGTTTCTTCTTGGGAGTTTGAATGGTTTAATCGGAACAATAAAGGCATATGCTAGTGAACTATTTAGAGAAGATCAGCAAGCCCTGGGTTT GTCAACGGTTAGCACAGCATGGGGTATAGGATTGATCATTGGCCCTGCTCTTGGAGGTTTCCTAGCTCAGCCAGCAGAGAAGTACCCAAATGTATTTTCC GAGGACTCGTTGTTTGGGAGGTTTCCCTACTTATTGCCATGCGTCGCAATATCGATTATTACTCTAGGAGTAACAATTGCATCTTTCTGGCTTCCGGTAA TTGTTTATGTAACTCGGCATTGA
AA sequence Show only first row Show all	>Lus10000256 pacid=23173390 polypeptide=Lus10000256 locus=Lus10000256.g ID=Lus10000256.BGIv1.0 annot-version=v1.0 MADDSTVPLLKKQYYENCPGCKVDQRKELNTGWPVRELFSISILVLSTTLPISSLFPYLYFMVRDFGIATRGEDIGYYAGCLGSSFMLARALTSVVWGLV ADRYGRKPVIMLGVSLMVIFNILFGLSVNFWMAISMRFLLGSLNGLIGTIKAYASELFREDQQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNVFS EDSLFGRFPYLLPCVAISIITLGVTIASFWLPVIVYVTRH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10000256 [exp]	0	1
AT3G07610		IBM1	increase in bonsai methylation...		Lus10015260 [exp]	2.4	0.8734
AT5G26230		MAKR1	membrane-associated kinase reg...		Lus10041214 [exp]	13.2	0.8121
AT4G23440			Disease resistance protein (TI...		Lus10024640 [exp]	18.3	0.7810
AT4G31770		ATDBR1	ARABIDOPSIS THALIANA DEBRANCHI...		Lus10020096 [exp]	31.1	0.7547
AT1G06560			NOL1/NOP2/sun family protein (...		Lus10007337 [exp]	32.6	0.8066
AT4G24790			AAA-type ATPase family protein...		Lus10013665 [exp]	44.4	0.7887
AT1G12700		RPF1	RNA processing factor 1, ATP b...		Lus10014245 [exp]	55.1	0.7455
AT1G10385			Vps51/Vps67 family (components...		Lus10024929 [exp]	62.6	0.7832
AT2G06000			Pentatricopeptide repeat (PPR)...		Lus10004615 [exp]	66.5	0.7626
AT4G18820			AAA-type ATPase family protein...		Lus10007316 [exp]	74.4	0.7473

Compare expression of checked genes

Lus10000256 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.