Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G64650 309 / 2e-105 Major facilitator superfamily protein (.1.2) AT4G27720 303 / 3e-103 Major facilitator superfamily protein (.1) AT3G49310 291 / 1e-98 Major facilitator superfamily protein (.1) AT2G23093 40 / 0.0005 Major facilitator superfamily protein (.1) AT5G17010 39 / 0.0008 Major facilitator superfamily protein (.1.2.3.4)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033228 [exp] 329 / 4e-113 AT1G64650 835 / 0.0 Major facilitator superfamily protein (.1.2) Lus10003219 [exp] 295 / 5e-100 AT1G64650 821 / 0.0 Major facilitator superfamily protein (.1.2) Lus10017322 [exp] 297 / 9e-100 AT1G64650 799 / 0.0 Major facilitator superfamily protein (.1.2) Lus10011083 [exp] 52 / 3e-08 AT2G23093 502 / 1e-176 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G145600 [exp] 314 / 2e-107 AT1G64650 831 / 0.0 Major facilitator superfamily protein (.1.2) Potri.015G008100 [exp] 303 / 3e-103 AT4G27720 827 / 0.0 Major facilitator superfamily protein (.1) Potri.012G020500 [exp] 301 / 3e-102 AT4G27720 761 / 0.0 Major facilitator superfamily protein (.1) Potri.007G052700 [exp] 45 / 1e-05 AT2G23093 425 / 3e-146 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF05631 [flax] [poplar] MFS_5 Sugar-tranasporters, 12 TM
Representative CDS sequence Show only first row Show all	>Lus10000337 pacid=23163525 polypeptide=Lus10000337 locus=Lus10000337.g ID=Lus10000337.BGIv1.0 annot-version=v1.0 ATGCTCTTCGGGACGATTGTTGGTTCTCTTGCTGACAAACAGGGCCGTAAGCGGGCGTCTATAACTTACTGCATAACTTACATCTTGAGTTGCATCACCA AGCATTCTCCTCAGTACAAGGTTTTGATGCTTGGACGGGTGCTGGGAGGCATCGCTACTTCTCTGCTGTTTTCGGCATTCGAGTCTTGGCTAGTCGCGGA ACACTTTAAGAGAGGTTTTGATCAACAGTGGCTCTCGGTAACATTCTCAAAGGCCATATTTCTCGGCAATGGCTTAGTAGCTATTGTTGCTGGATTGTTT GGAAATGTACTAGTCGATACCCTGGCACTTGGGCCTGTTGCTCCTTTTGATGCTGCTGCATGCTTTCTTGCAATTGGTATGGCAATCATTATCTCTACCT GGCCAGAAAATTATGGAGATCCTTCAGAAAACAAGGATTTGCTTACTCAATTCAAGGGAGCGGCTGTTGCCATTGCTTCTGGTGAGACCCTAATCTAG
AA sequence Show only first row Show all	>Lus10000337 pacid=23163525 polypeptide=Lus10000337 locus=Lus10000337.g ID=Lus10000337.BGIv1.0 annot-version=v1.0 MLFGTIVGSLADKQGRKRASITYCITYILSCITKHSPQYKVLMLGRVLGGIATSLLFSAFESWLVAEHFKRGFDQQWLSVTFSKAIFLGNGLVAIVAGLF GNVLVDTLALGPVAPFDAAACFLAIGMAIIISTWPENYGDPSENKDLLTQFKGAAVAIASGETLI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G64650			Major facilitator superfamily ...		Lus10000337 [exp]	0	1
AT5G54390		ATAHL, AHL	HAL2-like (.1)		Lus10037888 [exp]	1.4	0.9527
AT1G19835			Plant protein of unknown funct...		Lus10024325 [exp]	1.4	0.9571
AT1G19835			Plant protein of unknown funct...		Lus10024324 [exp]	3.5	0.9492
AT1G22610			C2 calcium/lipid-binding plant...		Lus10009460 [exp]	3.6	0.9230
AT5G16300			Vps51/Vps67 family (components...		Lus10037382 [exp]	4.6	0.9307
AT2G01970			Endomembrane protein 70 protei...		Lus10031876 [exp]	6.0	0.9409
AT1G13860		QUL1	QUASIMODO2 LIKE 1 (.1.2.3.4)		Lus10036883 [exp]	6.3	0.9364
AT2G01970			Endomembrane protein 70 protei...		Lus10031308 [exp]	6.9	0.9356
AT4G34450			coatomer gamma-2 subunit, puta...		Lus10042326 [exp]	7.3	0.9281
AT5G16720			Protein of unknown function, D...		Lus10004050 [exp]	7.5	0.9058

Compare expression of checked genes

Lus10000337 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.