Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G67360 166 / 9e-46 ARA12 Subtilase family protein (.1) AT3G14240 164 / 9e-45 Subtilase family protein (.1) AT4G34980 161 / 6e-44 SLP2 subtilisin-like serine protease 2 (.1) AT1G04110 157 / 2e-42 SDD1 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) AT2G05920 156 / 3e-42 Subtilase family protein (.1) AT3G14067 156 / 5e-42 Subtilase family protein (.1) AT5G51750 150 / 6e-40 ATSBT1.3 subtilase 1.3 (.1) AT4G26330 140 / 2e-36 ATSBT3.18, UNE17 UNFERTILIZED EMBRYO SAC 17, Subtilisin-like serine endopeptidase family protein (.1) AT2G04160 139 / 3e-36 AIR3 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) AT1G01900 138 / 9e-36 SBTI1.1, ATSBT1.1 subtilase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027891 [exp] 598 / 0 AT5G67360 531 / 3e-178 Subtilase family protein (.1) Lus10002392 [exp] 582 / 0 AT5G67360 530 / 3e-178 Subtilase family protein (.1) Lus10002393 [exp] 416 / 2e-140 AT5G67360 450 / 9e-148 Subtilase family protein (.1) Lus10027895 [exp] 344 / 9e-116 AT2G04160 207 / 5e-59 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Lus10024814 [exp] 194 / 5e-56 AT3G14240 504 / 3e-169 Subtilase family protein (.1) Lus10042644 [exp] 192 / 5e-56 AT5G67090 413 / 5e-136 Subtilisin-like serine endopeptidase family protein (.1) Lus10018721 [exp] 195 / 6e-56 AT5G67360 531 / 7e-179 Subtilase family protein (.1) Lus10001130 [exp] 187 / 5e-53 AT5G67090 581 / 0.0 Subtilisin-like serine endopeptidase family protein (.1) Lus10009748 [exp] 182 / 3e-51 AT5G67090 601 / 0.0 Subtilisin-like serine endopeptidase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G100500 [exp] 355 / 2e-116 AT4G34980 541 / 0.0 subtilisin-like serine protease 2 (.1) Potri.014G026600 [exp] 223 / 3e-66 AT5G67360 546 / 0.0 Subtilase family protein (.1) Potri.002G124500 [exp] 186 / 7e-53 AT5G67090 577 / 0.0 Subtilisin-like serine endopeptidase family protein (.1) Potri.014G018900 [exp] 181 / 5e-51 AT5G67360 994 / 0.0 Subtilase family protein (.1) Potri.014G026700 [exp] 178 / 6e-50 AT5G67090 582 / 0.0 Subtilisin-like serine endopeptidase family protein (.1) Potri.002G120400 [exp] 173 / 4e-48 AT5G67360 966 / 0.0 Subtilase family protein (.1) Potri.014G026500 [exp] 169 / 7e-47 AT5G67090 604 / 0.0 Subtilisin-like serine endopeptidase family protein (.1) Potri.006G141200 [exp] 168 / 2e-46 AT2G05920 1103 / 0.0 Subtilase family protein (.1) Potri.005G145300 [exp] 165 / 1e-45 AT5G67360 932 / 0.0 Subtilase family protein (.1) Potri.001G167300 [exp] 166 / 2e-45 AT3G14067 978 / 0.0 Subtilase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00082 [flax] [poplar] Peptidase_S8 Subtilase family
Representative CDS sequence Show only first row Show all	>Lus10000379 pacid=23154557 polypeptide=Lus10000379 locus=Lus10000379.g ID=Lus10000379.BGIv1.0 annot-version=v1.0 ATGTTTAACGGAGCTCCATGGATCACAGCCGTGAGTGCTGGCATCCTCGATCGTGACCTTGGAGCTCGGATCGTCTACGATCTGATTGTCACGGGACATT CGATGTACCCGGAGAATCTGTTCATAGACAGAGTTCCTGTGTATTTCGGCAGAGGGAATCGGAGTACGGAGACTTGCGACGTTATCGACCTAAGTCAAGC CGCGGGGAAGTTCATGTTTTGCGATGATGATGATGACGAGAATAACGATGATCGCAATGCTACATTAGCGTTTAAGCCGAGATACGAGACCTTTTATAAT GAAGATACTTCCGGCCAGGACAATGGGGCCGTCGCAGAAATAATCAAAAGCATGGATGAGGCTGATGTAGAGTTCTACGGCCACGCTATGGATTTCGACA CGCAGTATGTCATGGTGAGAACAAAAATAGGAGAATCGATTAAGCGTTACATACTCAACTCGATCGTCAGTGTGAACTTTGGTGAGACAATTTACAGACA CAAATCGGTTCCTAAAGTCACATACTTCGGTTCAAGAGGATCTGATGAGAGGCCCCCTTGGATATTGAAGCCCGACTACGACATCATACCCGCGTGGCCT CCGAATCGGGCGTTTGCCCCTATTCAAGGAGGGGATGATTATTTGCAAACGGACTATGCTATCATCTTAGGTACATCAATTTCGTGTCCACACATAGCCG GGTTGGCTGCATTGATGATATCAGCACACAAAGACTGGACGGTGGCCGCGATCCGGTCAGCCATGATGAAAATATCATACATTACAGACAATGTCAGAGG TACGATCATCGATATGAGGACACGAGAGGCAGGAACGCCCCTTGATTTCGGGTCGGGACATGTGAATCCCAACAAGGCATTGGATCCTGGCTTGGTCTAC GACATCGGGACCAATGACTATGTGAACTACCTATGTGCAATGAACTATACTAAGTCCGAGATAGGGATCCTTACTGGGGAATCTCCGAATTCAATCAGTT GCGAATTGGGGACCCTCGATCTGAACTACCCTTCGTTCATGGTAGTGATGAACAACACAAGTTCGTAA
AA sequence Show only first row Show all	>Lus10000379 pacid=23154557 polypeptide=Lus10000379 locus=Lus10000379.g ID=Lus10000379.BGIv1.0 annot-version=v1.0 MFNGAPWITAVSAGILDRDLGARIVYDLIVTGHSMYPENLFIDRVPVYFGRGNRSTETCDVIDLSQAAGKFMFCDDDDDENNDDRNATLAFKPRYETFYN EDTSGQDNGAVAEIIKSMDEADVEFYGHAMDFDTQYVMVRTKIGESIKRYILNSIVSVNFGETIYRHKSVPKVTYFGSRGSDERPPWILKPDYDIIPAWP PNRAFAPIQGGDDYLQTDYAIILGTSISCPHIAGLAALMISAHKDWTVAAIRSAMMKISYITDNVRGTIIDMRTREAGTPLDFGSGHVNPNKALDPGLVY DIGTNDYVNYLCAMNYTKSEIGILTGESPNSISCELGTLDLNYPSFMVVMNNTSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10000379 [exp]	0	1

Compare expression of checked genes

Lus10000379 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.