Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G53460 3627 / 0 GLT1 NADH-dependent glutamate synthase 1 (.1.2.3) AT5G04140 1145 / 0 GLS1, GLUS, GLU1, FD-GOGAT FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE, glutamate synthase 1 (.1.2) AT2G41220 1139 / 0 GLU2 glutamate synthase 2 (.1) AT4G32360 58 / 8e-08 Pyridine nucleotide-disulphide oxidoreductase family protein (.1) AT1G62560 54 / 9e-07 FMOGS-OX3 ,FMO GS-OX3 flavin-monooxygenase glucosinolate S-oxygenase 3 (.1) AT1G62620 50 / 1e-05 Flavin-binding monooxygenase family protein (.1) AT1G63370 50 / 2e-05 Flavin-binding monooxygenase family protein (.1) AT1G65860 48 / 8e-05 FMOGS-OX1 ,FMO GS-OX1 flavin-monooxygenase glucosinolate S-oxygenase 1 (.1) AT5G61290 46 / 0.0003 Flavin-binding monooxygenase family protein (.1) AT5G07800 45 / 0.0004 Flavin-binding monooxygenase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019020 [exp] 1457 / 0 AT5G53460 1280 / 0.0 NADH-dependent glutamate synthase 1 (.1.2.3) Lus10019021 [exp] 1316 / 0 AT5G53460 1273 / 0.0 NADH-dependent glutamate synthase 1 (.1.2.3) Lus10010457 [exp] 1144 / 0 AT5G04140 2772 / 0.0 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE, glutamate synthase 1 (.1.2) Lus10003820 [exp] 585 / 1e-176 AT2G41220 1401 / 0.0 glutamate synthase 2 (.1) Lus10015217 [exp] 64 / 8e-10 AT4G32360 661 / 0.0 Pyridine nucleotide-disulphide oxidoreductase family protein (.1) Lus10031463 [exp] 61 / 9e-09 AT4G32360 659 / 0.0 Pyridine nucleotide-disulphide oxidoreductase family protein (.1) Lus10003474 [exp] 48 / 9e-05 AT5G07800 623 / 0.0 Flavin-binding monooxygenase family protein (.1) Lus10033928 [exp] 46 / 0.0006 AT4G16310 1391 / 0.0 LSD1-like 3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G017500 [exp] 3799 / 0 AT5G53460 3665 / 0.0 NADH-dependent glutamate synthase 1 (.1.2.3) Potri.012G011700 [exp] 3738 / 0 AT5G53460 3649 / 0.0 NADH-dependent glutamate synthase 1 (.1.2.3) Potri.006G038400 [exp] 1137 / 0 AT5G04140 2831 / 0.0 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE, glutamate synthase 1 (.1.2) Potri.016G036900 [exp] 1133 / 0 AT5G04140 2813 / 0.0 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE, glutamate synthase 1 (.1.2) Potri.015G017601 [exp] 130 / 1e-35 AT5G53460 119 / 3e-33 NADH-dependent glutamate synthase 1 (.1.2.3) Potri.017G118801 [exp] 57 / 1e-07 AT4G32360 666 / 0.0 Pyridine nucleotide-disulphide oxidoreductase family protein (.1) Potri.001G121100 [exp] 48 / 9e-05 AT1G62600 607 / 0.0 Flavin-binding monooxygenase family protein (.1) Potri.012G067500 [exp] 45 / 0.0007 AT5G07800 696 / 0.0 Flavin-binding monooxygenase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0063 [flax] [poplar] NADP_Rossmann PF07992 [flax] [poplar] Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase CL0036 [flax] [poplar] TIM_barrel PF01645 [flax] [poplar] Glu_synthase Conserved region in glutamate synthase CL0036 [flax] [poplar] TIM_barrel PF04898 [flax] [poplar] Glu_syn_central Glutamate synthase central domain CL0036 [flax] [poplar] PF01493 [flax] [poplar] GXGXG GXGXG motif CL0052 [flax] [poplar] NTN PF00310 [flax] [poplar] GATase_2 Glutamine amidotransferases class-II
Representative CDS sequence Show only first row Show all	>Lus10000390 pacid=23146074 polypeptide=Lus10000390 locus=Lus10000390.g ID=Lus10000390.BGIv1.0 annot-version=v1.0 ATGGCGGGTACGGGCACTATGAGCAATCTCCTTCAACAAGGAGCAAGCTCCTCTTCGTCGTCTACGCTCCCGAAGAAGCCAAGCAGGTCGTTATGTTCGC CTGTATTCGCCGTCGCGCCGGTGATCCCTCGCCGTGGTGGGACTCGATGCTCCGTCGCGAAGAATTCGGCAGCCGGTTTAGGGAAAAACTTGTTGCGGAC TCACGGATCCGATAAGAAACTCGTGTGGAAATCTGACGGACCGGGGAGGTCGCCGAAGCTGCGGATGATGGTCAGGTCCGCATTGTCCGGGGTTCCGGAG AAGCCGCTTGGACTTTACGATCCGTCTTTCGATAAGGACTCTTGTGGGGTGGGATTCGTCGCTGAGCTGTCGGGTGAAAGCAATCGCAAGACGGTAAGCG ATGCATTGGAGATGTTAGTGCGGATGACGCATAGAGGTGCTTGTGGATGTGAAGCGAATACTGGCGATGGAGCTGGGATTCTCGTTGGTCTTCCTCACGC CTTCTACAAAGAGGTTGCAAAGGATGCTGGGTTTGTGCTACCTCCACCGGGGGAATATGCAGTTGGCATGTTCTTTTTGCCCACCTTGGATAACCGCAGA GAGGAAAGCAAGAATGTGTTTACCAAGGTTGCCGAGTCTCTTGGGCATACAGTTCTTGGATGGCGGTCGGTGCCGACAGATAATTCTGGTTTGGGTCAGT CTGCTGTGCAGACTGAGCCTGTGGTTGAGCAGGTTTTCCTCACACCCACTCCTAGATCGAAAGCTGATTTCGAGCAACAGATGTACATCTTACGGAGGGT GTCCATGGTAGCTATCCGAGCTGCTCTAAACCTTCAACATGGTGGTGTCCGAGACTTCTATATATGTTCTTTGTCATCTAGGACTGTTGTTTATAAGGGT CAGCTGAAGCCTGTACAGTTGAGCGAGTACTACTATGCGGATCTTGGGAATGAAAGGTTTACGAGCTACATGGCCCTGGTACATTCTCGCTTTTCGACCA ATACCTTCCCTAGCTGGGATCGTGCCCAACCTATGCGTGTCTTGGGCCACAATGGTGAAATTAACACTCTTAGGGGCAATGTGAACTGGATGAGGGCACG CGAAGGTCTTTTGAAATGCAAGGAGCTTGGACTCTCTAAGAATGAGATGAAGAAGCTTTTGCCAATTGTTGATGCTAGTTCATCAGACTCTGGGGCTTTC GATGGTGTCCTTGAACTTCTGGTTCGAGCTGGTAGAAGTCTCCCTGAAGCTGTCATGATGATGATTCCTGAGGCCTGGCAAAATGACAAAAATATCGACC CACAAAGGAAAGCTTTGTACGAGTACTTCTCTTGTCTCATGGAGCCATGGGATGGGCCTGCACTTGTCTCATTCACTGATGGCCACTACCTTGGAGCTAC ACTAGATCGCAATGGCTTGCGTCCAGGCAGGTTCTATGTCACTCGTAGTGGTAGAGTTATCATGGCCAGTGAAGTTGGTGTTGTAGATGTGCCGCCTGAA GATGTCCTCAGGAAAGGAAGGCTTAACCCTGGAATGATGCTTCTGGTGGATTTTGAGAAGCATATTGTTGTTGATGATGAAGCCTTGAAACAGCAGTACT CGTTGTCACAGCCTTATGGTGATTGGTTGAAGAGGCAAAAGATTGAACTAAAGGACATAATTGAGACAGTTCCTGAATCTGACCGACTTCCTCCAGGGAT GGCGGGTGTTGCTCCCGCTTCTGATGATGACGAGAACATGGAGAAAATGGGTGTTCACGGCTTGTTGGCTCCATTGAAAGCTTTTGGCTATACTGTTGAA GCCTTGGAAATGCTGCTTCTTCCGATGGCAAAAGATGGCAGCGAGGCTCTTGGCTCAATGGGCAATGATACTCCATTGGCTGTGATGTCCGACAGAGAAA AGCTAACTTTTGAATACTTCAAGCAAATGTTTGCCCAAGTGACAAACCCTCCAATTGACCCCATTAGAGAGAAAATTGTCACTTCAATGGAATGCATGAT TGGTCCTGAAGGTGATCTGACAGAAACAACTGAAGATCAATGCCACCGCCTCTCACTGAAAGGTCCTCTCCTGACAATTGATGAAATACAGGCTCTTAAA AAGATGGACTACAGGGGTTGGAGGAGCAAAGTTCTTGATATAACTTATTCAAGGGACCGTGGCAGGAAGGGACTGGAGGAAACGTTGGATAGGATTTGTG CTGAGGCACATGCTGCTATCAAGGAAGGCTACACCTTGTTGGTTCTTTCTGACAGAGCATTCTCTCCAACAAGAGTTGCTATAAGCTCACTCTTGGCTGT TGGTGCTGTCCATCATCACCTTGTCAGAAGGCTTGAGCGGACTCAAGTGGGCCTGATAGTGGAGTCTGCTGAACCGCGTGAAGTGCATCATTTTTGTACG TTGGTTGGATTTGGCGCCGATGCTATATGCCCATACTTAGCTGTAGAAGCTATTTGGAGACTGCAGGTTGATGGAAAAATTCCACCAAAATCTAATGGCG AGTTCCGCTCCAAGAATGAGTTGGTGAAAAAGTATTTCAAAGCAAGTAATTATGGTATGATGAAGGTTCTTGCCAAAATGGGGATATCAACGTTGGCGTC ATACAAAGGGGCACAGATTTTCGAAGCCCTTGGCCTTTCATCCGAGGTGATTGATAAATGCTTTGCTGGAACTCCCAGCAGGGTTGAGGGAGCTACGTTT GAGATGCTTGCCCATGATTATCTTCATTTACACGGGTTGGCATTTCCTACACGAGGTCTTCCTCGTCTTCCGCGTGGATGTGAAGAGGCTGTTGCACTGC CAAATCCAGGGGATTATCATTGGCGAAAGGGTGGTGAAATCCACTTGAATGATCCTCTTGCTATTGCAAAGCTTCAAGAAGCTGCGAGAGCGAATAGTGT AGCTGCTTATAAAGAATACTCAAAACGTATCCAGGAATTGAACAAAGCATGTAACTTGAGGGGTATCCTGAAGTTTAAAGACTCTGCCGCTAAGGTTCCG CTGGAAGAAGTAGAGGCAGCTAGGGGAATTGTTAAACGTTTCTGCACTGGGGCTATGAGTTATGGGTCGATTTCATTGGAGGCTCACACAACACTGGCTC TTGCGATGAATAAGATTGGAGGGAGATCTAACACAGGTGAGGGAGGCGAGCAGCCATCTCGACTGGTGCCTCTTCCAGATGGTTCCAGGAATCCGAAAAG GAGTTCAATTAAGCAGGTTGCAAGTGGGCGTTTTGGCGTTTCAAGTTACTATCTTACAAATGCTGATGAGTTGCAGATAAAGATGGCTCAGGGTGCCAAG CCTGGTGAAGGCGGCGAGCTACCTGGACATAAAGTTATAGGAGACATTGCAGTAACCCGAAATTCCACTGCTGGTGTTGGTCTCATCAGTCCGCCTCCTC ATCATGATATCTACTCAATTGAAGACCTTGCCCAACTGATTCATGATCTCAAGAATGCCAATCCAGGAGCCCGGATTAGTGTCAAGTTGGTGTCTGAAGC TGGTGTTGGTGTGATTGCTAGTGGAGTGGTGAAGGGTCATGCTGATCATGTTTTGATCTCTGGTCACGATGGAGGTACTGGAGCTTCTAGATGGACTGGC ATCAAGAACGCTGGCCTGCCTTGGGAACTTGGTTTGGCCGAGACCCACCAAACTCTTGTTGCTAACAACCTTCGTGGACGGACCGTTCTTCAGACTGATG GTCAATTGAAAACTGGAAGAGATGTAGCTGTTGCTGCACTTCTTGGTGCAGAAGAGTTTGGCTTCAGCACTGCACCTCTTATAACTCTCGGTTGTATCAT GATGAGAAAGTGCCATAAAAATACATGCCCCGTTGGCATTGCTACCCAAGATCCAGTTTTGAGAGAGAAGTTTGCTGGGGAACCTGAACATGTCATCAAT TTCTTATTTATGCTAGCTGAAGAACTTAGGGAAATCATGGCTGGTCTTGGTTTCCGTACTGTTAATGAGATGGTTGGACGTGCGGATATGCTCGAAGTTG ATAAAGAGGTTGTACGAAACAATGAGAAGTTGGAGAACATTGATCTTTCGCTTTTGCTTAGACCTGCTTCTGACATCCGACCTGAGGCTGCACAGTATTG TGTTGAGAAGCAGGATCATGGCTTAGACATGGCGCTGGACAACAAACTTATCACACTCTCAACTGCTGCCATAGAAAAGAGTATTCCTGTATACATAGAG TCTCCTATATGCAATGTGAACCGTGCTGTTGGTACAATGCTTAGTCACGAAGTTACTAAGCGTTACAATTTGGCAGGGCTTCCTAAAGACACAATTCATG TCAAACTCTTTGGAAGTGCTGGGCAAAGTCTTGGTGCTTTCCTTTGTCCTGGCATAACCCTGGAGCTTGAGGGTGACAGCAATGATTACGTTGGTAAAGG ATTGTCAGGTGGAAAGATCGTAGTTTATCCACCAAAAGGAAGCCTATTTGATCCAAAAGAAAACATCGTCATTGGTAATGTGGCTCTGTATGGTGCCACC AGTGGTGAAGCCTATTTTAATGGCATGGCAGCAGAAAGGTTTTGTGTGCGTAATTCAGGGGCAACTGCAGTTGTTGAAGGAGTCGGTGATCATGGATGTG AGTACATGACAGGCGGAACAGTAGTTGTGCTTGGGAAGACGGGCAGGAATTTTGCTGCAGGCATGAGCGGTGGTATTGCTTATGTTCTTGACGGTGATGG TAAATTTCATTCTCGTTGCAATCCGGAATTGGTAGATCTTGATAAAGTTGAGGAAGAAGAGGACATCATGCATCTAAGAATGATGATACAGCAGCATCAG CGCAATACTAACAGCCAGTTAGCTAAAGAAGTGTTGGCTGATTTTGACAATCTCCTTCCGAAGTTCATCAAGGTCTTTCCAAGAGACTACAAGCGTATTC TTGCAAGCATGAAAAGCCAGTCAGCTTCTCAGGAAGTTGCTGAGAAAATGGTTAAAGAAACAGAGGACCAAGATGAGGTAGAGTTGACTCCGAAAGATGC TTTTGAGGAGCTCAAGAAATTAGCAGCTGCATCATTGAGTGACAAATCCATTCAGGGGCAAGAAGCTGATGAATCAAAAAGGCCAAGTCGGGTTAGTGAT GCTGTTAAGCATCGTGGGTTTATTGCTTATGAGCGTGAGGGTGTTCACTACAGAGATCCTAATGTCCGCATGAATGACTATAATGAAGTTATGGAGGAGA CGAAACCTGGCCCTCTTTTGAACACCCAGTCAGCTCGCTGCATGGATTGTGGTACTCCTTTCTGCCATCAGGAGCACACTGGCTGTCCTCTAGGAAACAA AATACCTGAGTTCAACGAGCTGGTTTACCAAAATAGATGGCGTGAAGCATTAGACAGGCTGCTTGAGACGAACAACTTCCCGGAATTTACTGGCCGTGTA TGCCCTGCTCCCTGCGAAGGTTCCTGCGTTCTTGGAATTATTGAAAATCCCGTTTCCATTAAAAGCATAGAATGTGCTATCATTGACAAGGCCTTCGAAG AGGGGTGGATGAAACCAAGGCCTCCTCTCAATAGAACTGGGAAACGAGTTGCTATCATTGGAAGTGGACCTGCTGGTTTGGCTGCAGCTGATCAGCTAAA TAGAATGGGTCATTTGGTGACAGTCTACGAGCGTGCTGATAGAATTGGAGGGCTGATGATGTATGGAGTCCCCAACATGAAGACTGACAAAATGGATGTA GTTCAGCGGCGTGTGAATCTCATGGCAGAGGAAGGCATTGACTTCGTGGTCAATGCTAATGTTGGGGTTGATCCCCAGTATCATCTTGACCGTCTCCGGG AAAATAATGACGCTGTTATTTTGGCTGTAGGAGCCACCAAACCGAGGGACCTTCCCGTACCTGGACGGGACTTGCAAGGAGTTCATTTTGCCATGGAGTT CCTTCACGCAAACACAAAGAGTTTGCTCGATAGCAATCTTGAGGATGGCAACTACATATCAGCTAAAGGGAAAAAAGTGGTCGTCATTGGTGGAGGTGAC ACCGGTACAGACTGCATAGGAACATCCATCCGCCATGGTTGTACCAGCATCGTAAATCTTGAGCTTCTACCTGAGCCGCCAAGGACTAGAGCACCAGGCA ACCCTTGGCCACAGTGGCCTCGCATCTTCCGGGTAGACTATGGACACCAAGAAGCTGCAACGAAATTCGGCAAAGACCCACGATCTTACCAAGTGTTGAC CAAACGTTTCGTGGGAGACGAAAGTGGGAAACTCAAGGGGCTTGAGATTGTCCATGTCGAATGGGAGAAGGATGCGAGTGGGAGATTCCAGTTTAAGGAG GTCGAAGGTTCGGAGGAAATCATTGAGGCTGACCTTGTCATGCTAGCAATGGGATTCCTTGGTCCTGAGGCGAACTTGGCTGAAAAGCTGGGCTTGGAGC AAGACGGCCGATCAAACTTCAAAGCTGATTACGGCCGATTCTCTACCAACGTGGAAGGAGTGTTTGCTGCTGGGGATTGTCGTCGAGGGCAGTCGCTTGT CGTGTGGGCAATATCAGAGGGAAGACAAACAGCAGCACAGGTGGACAAGTATTTGATGGGAGAAGAGGATGCCAGCATCGGCACATCGGACGATGATGCC GAGAGACAGCCAGACAAGACAAAGAAGCAGCAAGACAACAAGCACCGAGTCATGACATAA
AA sequence Show only first row Show all	>Lus10000390 pacid=23146074 polypeptide=Lus10000390 locus=Lus10000390.g ID=Lus10000390.BGIv1.0 annot-version=v1.0 MAGTGTMSNLLQQGASSSSSSTLPKKPSRSLCSPVFAVAPVIPRRGGTRCSVAKNSAAGLGKNLLRTHGSDKKLVWKSDGPGRSPKLRMMVRSALSGVPE KPLGLYDPSFDKDSCGVGFVAELSGESNRKTVSDALEMLVRMTHRGACGCEANTGDGAGILVGLPHAFYKEVAKDAGFVLPPPGEYAVGMFFLPTLDNRR EESKNVFTKVAESLGHTVLGWRSVPTDNSGLGQSAVQTEPVVEQVFLTPTPRSKADFEQQMYILRRVSMVAIRAALNLQHGGVRDFYICSLSSRTVVYKG QLKPVQLSEYYYADLGNERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCKELGLSKNEMKKLLPIVDASSSDSGAF DGVLELLVRAGRSLPEAVMMMIPEAWQNDKNIDPQRKALYEYFSCLMEPWDGPALVSFTDGHYLGATLDRNGLRPGRFYVTRSGRVIMASEVGVVDVPPE DVLRKGRLNPGMMLLVDFEKHIVVDDEALKQQYSLSQPYGDWLKRQKIELKDIIETVPESDRLPPGMAGVAPASDDDENMEKMGVHGLLAPLKAFGYTVE ALEMLLLPMAKDGSEALGSMGNDTPLAVMSDREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMIGPEGDLTETTEDQCHRLSLKGPLLTIDEIQALK KMDYRGWRSKVLDITYSRDRGRKGLEETLDRICAEAHAAIKEGYTLLVLSDRAFSPTRVAISSLLAVGAVHHHLVRRLERTQVGLIVESAEPREVHHFCT LVGFGADAICPYLAVEAIWRLQVDGKIPPKSNGEFRSKNELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIDKCFAGTPSRVEGATF EMLAHDYLHLHGLAFPTRGLPRLPRGCEEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARANSVAAYKEYSKRIQELNKACNLRGILKFKDSAAKVP LEEVEAARGIVKRFCTGAMSYGSISLEAHTTLALAMNKIGGRSNTGEGGEQPSRLVPLPDGSRNPKRSSIKQVASGRFGVSSYYLTNADELQIKMAQGAK PGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTG IKNAGLPWELGLAETHQTLVANNLRGRTVLQTDGQLKTGRDVAVAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVIN FLFMLAEELREIMAGLGFRTVNEMVGRADMLEVDKEVVRNNEKLENIDLSLLLRPASDIRPEAAQYCVEKQDHGLDMALDNKLITLSTAAIEKSIPVYIE SPICNVNRAVGTMLSHEVTKRYNLAGLPKDTIHVKLFGSAGQSLGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKGSLFDPKENIVIGNVALYGAT SGEAYFNGMAAERFCVRNSGATAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDGDGKFHSRCNPELVDLDKVEEEEDIMHLRMMIQQHQ RNTNSQLAKEVLADFDNLLPKFIKVFPRDYKRILASMKSQSASQEVAEKMVKETEDQDEVELTPKDAFEELKKLAAASLSDKSIQGQEADESKRPSRVSD AVKHRGFIAYEREGVHYRDPNVRMNDYNEVMEETKPGPLLNTQSARCMDCGTPFCHQEHTGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRV CPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMKPRPPLNRTGKRVAIIGSGPAGLAAADQLNRMGHLVTVYERADRIGGLMMYGVPNMKTDKMDV VQRRVNLMAEEGIDFVVNANVGVDPQYHLDRLRENNDAVILAVGATKPRDLPVPGRDLQGVHFAMEFLHANTKSLLDSNLEDGNYISAKGKKVVVIGGGD TGTDCIGTSIRHGCTSIVNLELLPEPPRTRAPGNPWPQWPRIFRVDYGHQEAATKFGKDPRSYQVLTKRFVGDESGKLKGLEIVHVEWEKDASGRFQFKE VEGSEEIIEADLVMLAMGFLGPEANLAEKLGLEQDGRSNFKADYGRFSTNVEGVFAAGDCRRGQSLVVWAISEGRQTAAQVDKYLMGEEDASIGTSDDDA ERQPDKTKKQQDNKHRVMT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G53460		GLT1	NADH-dependent glutamate synth...		Lus10000390 [exp]	0	1
AT5G53460		GLT1	NADH-dependent glutamate synth...		Lus10019021 [exp]	2.4	0.8276
AT4G35830		ACO1	aconitase 1 (.1.2)		Lus10041858 [exp]	4.0	0.7892
AT4G35830		ACO1	aconitase 1 (.1.2)		Lus10028405 [exp]	10.2	0.7589
AT1G79830		GC5	golgin candidate 5 (.1.2.3.4)		Lus10037556 [exp]	14.1	0.7806
AT3G01810			unknown protein		Lus10037001 [exp]	18.7	0.7764
AT5G56240			unknown protein		Lus10008344 [exp]	19.3	0.7497
AT1G16780		AtVHP2;2, AVPL1	Inorganic H pyrophosphatase fa...		Lus10033345 [exp]	26.5	0.7468
AT5G18410		ATSRA1, KLK, PI...	PIROGI 121, PIROGI, KLUNKER, t...		Lus10004776 [exp]	27.7	0.7657
AT5G53480			ARM repeat superfamily protein...		Lus10008864 [exp]	28.6	0.7712
AT4G04920		AtSFR6, SFR6	sensitive to freezing 6 (.1.2)		Lus10018482 [exp]	32.5	0.6813

Compare expression of checked genes

Lus10000390 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.