Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22360 470 / 3e-163 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22380 464 / 8e-161 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22340 461 / 2e-159 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22400 458 / 2e-158 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22370 429 / 2e-147 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G78270 414 / 5e-141 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT5G59590 237 / 6e-73 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT5G59580 231 / 2e-70 UGT76E1 UDP-glucosyl transferase 76E1 (.1) AT3G46670 220 / 2e-66 UGT76E11 UDP-glucosyl transferase 76E11 (.1) AT3G46690 217 / 3e-65 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025741 [exp] 446 / 2e-153 AT1G22380 525 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10031388 [exp] 440 / 4e-151 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10024583 [exp] 437 / 5e-150 AT1G22380 598 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032220 [exp] 434 / 5e-149 AT1G22380 601 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10041055 [exp] 430 / 4e-147 AT1G22360 610 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10013925 [exp] 428 / 1e-146 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10035903 [exp] 424 / 4e-145 AT1G22360 522 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10032218 [exp] 423 / 1e-144 AT1G22380 564 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013924 [exp] 416 / 1e-141 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G095000 [exp] 519 / 0 AT1G22340 543 / 0.0 UDP-glucosyl transferase 85A7 (.1) Potri.005G073766 [exp] 494 / 1e-172 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.005G073800 [exp] 494 / 1e-172 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.002G098400 [exp] 473 / 2e-164 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098300 [exp] 454 / 2e-156 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 451 / 1e-155 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 446 / 6e-154 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 443 / 2e-152 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 442 / 3e-152 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 442 / 4e-152 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10000632 pacid=23175098 polypeptide=Lus10000632 locus=Lus10000632.g ID=Lus10000632.BGIv1.0 annot-version=v1.0 ATGGGTCCAACCGGAAAACCGCACGCGGTTCTAATCCCGTACCCGGCCCAGGGCCACATCAACCCGTTCATGCAGCTAGGCAAGCTCCTCCACTCCAAGG GCTTCCACATCACCTTCGTCAACAACCACTTCAACCACGACCGCCTCCTCCGGTCCAAAGGAATCAAATTCCTGAAAACCTGCCCCGATTTCGTGTTCGA GTCAATCCCCGATGGGCTCGGGGACTCTGACCCGGACGCCACACAGAGCATCGATGCTCTGAGTGACTCGGCCAGGAAGTACATGATTGGGCCGTTGATG GAGCTCGTTGAGAGGATCAACGGCCCGGATGGTCGGGCCCCAAGGATCACGTGTGTGATCCCCGACGGGTTCATGGGCTTCGGGTTGGTGGCTGCTGAGA GGCTCGGTGTCCCCGGAGTCCCCTTTTGGACTGCCTCGGCTTGTGGGTTCATGGCTTATCTTCACATTGGTCAGCTCATTGAGAAAGGACTCATTCCCCA TAAGAGTGAGAGCTACGAATCCGACGGCAGCCTGGACACGGAAGTGGGATGGATCCCAGGGATGTCCCACGCGCGTCTACGCGACCTCCCATGCGCCACG CGCACCACCAACCCAGAGGCCATCCTCCTCAACTGCCTCCGTGACGAGGTCCAAGCCGACCTGCGGGCCCCAGCCATCATCTTCAACATCTTCGAGGAGT TCGAGGACGAGATCTTCTTCAAGATCAAGAAGTTCTACCCGCACTTGTACCCAATCGGGCCGCTCTCCTTGTTGGAGAACCACGTGGTCCCGTTAGATTC GCCGATCCGGACCCACCGTACCACCCTGTGGAAGGAGGACGTTGAGTGCCTCGATTGGCTAGACACGCGGCCACATGGGTCTGTGGTCTATGTGAACTAC GGGAGCATTGTCGTTCTGTCGGAGAACGACTTCCGTGAGTTTGCATGGGGTTTGGCGAACAGCGGCCACGCATTCCTGTGGATCGTGAGGCCGGATGTCG CCAGGGATATGGCGACGATTTTGAACGAGGAGTTTTACAGTGCGGTCGAGGGTAGGGCAATGCTGGCGAGCTGGTGTGCTCAGGATAAGGTGTTGTCCCA CCCGTCCGTGGGGACCTTTCTCACGCACTGTGGGTGGAATTCGATGGTGGAAGGAATATGCGGAGGGAAGCCGATGATTTGTTGCGGGTATTTTGCGGAG CAACCGACGAATTGCCATTTCGCGACTAAGGTATGGGGCATTGGTGTGGAGATCGACCCGGATGTGAAGAGGGAGAATATTAGTGGGTGGGTCAAGGAGA TGATGGAAGGTGAAGATGGGAAGAGGATGAAGAACAAGGCATTGGAGTGGAAGAAGAAGGCCGAGGTTGCTACGGACATCGGCGGTTCGGCTTACGAGAG CTTCAATCGGGTTTTGAACGTTTTGAATTCGTCTCTCGAGTGA
AA sequence Show only first row Show all	>Lus10000632 pacid=23175098 polypeptide=Lus10000632 locus=Lus10000632.g ID=Lus10000632.BGIv1.0 annot-version=v1.0 MGPTGKPHAVLIPYPAQGHINPFMQLGKLLHSKGFHITFVNNHFNHDRLLRSKGIKFLKTCPDFVFESIPDGLGDSDPDATQSIDALSDSARKYMIGPLM ELVERINGPDGRAPRITCVIPDGFMGFGLVAAERLGVPGVPFWTASACGFMAYLHIGQLIEKGLIPHKSESYESDGSLDTEVGWIPGMSHARLRDLPCAT RTTNPEAILLNCLRDEVQADLRAPAIIFNIFEEFEDEIFFKIKKFYPHLYPIGPLSLLENHVVPLDSPIRTHRTTLWKEDVECLDWLDTRPHGSVVYVNY GSIVVLSENDFREFAWGLANSGHAFLWIVRPDVARDMATILNEEFYSAVEGRAMLASWCAQDKVLSHPSVGTFLTHCGWNSMVEGICGGKPMICCGYFAE QPTNCHFATKVWGIGVEIDPDVKRENISGWVKEMMEGEDGKRMKNKALEWKKKAEVATDIGGSAYESFNRVLNVLNSSLE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22360		ATUGT85A2, AT2	UDP-glucosyl transferase 85A2 ...		Lus10000632 [exp]	0	1
AT3G12580		ATHSP70, HSP70	ARABIDOPSIS HEAT SHOCK PROTEIN...		Lus10023423 [exp]	3.7	0.8790
AT4G29110			unknown protein		Lus10014153 [exp]	5.1	0.8755
AT1G58210		EMB1674	EMBRYO DEFECTIVE 1674, kinase ...		Lus10001866 [exp]	6.7	0.8560
AT2G38860		YLS5	Class I glutamine amidotransfe...		Lus10014721 [exp]	7.0	0.8500
AT3G48560		TZP5, IMR1, ALS...	TRIAZOLOPYRIMIDINE RESISTANT 5...		Lus10022446 [exp]	7.7	0.8400
AT5G05260		CYP79A2	cytochrome p450 79a2 (.1)		Lus10000627 [exp]	8.5	0.8522
AT4G39950		CYP79B2	"cytochrome P450, family 79, s...		Lus10023144 [exp]	8.9	0.8491
AT2G47180		ATGOLS1	galactinol synthase 1 (.1)		Lus10031434 [exp]	10.1	0.8687
AT3G26300		CYP71B34	"cytochrome P450, family 71, s...		Lus10011499 [exp]	10.4	0.8289
AT5G01600		ATFER1	ARABIDOPSIS THALIANA FERRETIN ...		Lus10002865 [exp]	10.6	0.8371

Compare expression of checked genes

Lus10000632 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.