Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G50470 52 / 2e-08 MLA10, HR3 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) AT3G50460 47 / 1e-06 HR2 homolog of RPW8 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009328 [exp] 194 / 2e-63 AT3G50470 79 / 4e-18 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) Lus10000835 [exp] 130 / 1e-38 AT3G50470 51 / 5e-08 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) Lus10009329 [exp] 115 / 1e-32 AT5G66630 42 / 2e-04 DA1-related protein 5 (.1) Lus10000834 [exp] 91 / 4e-23 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G038600 [exp] 52 / 2e-08 AT3G50470 76 / 4e-17 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF05659 [flax] [poplar] RPW8 Arabidopsis broad-spectrum mildew resistance protein RPW8
Representative CDS sequence Show only first row Show all	>Lus10000836 pacid=23148147 polypeptide=Lus10000836 locus=Lus10000836.g ID=Lus10000836.BGIv1.0 annot-version=v1.0 ATGGATCCGTCGACAGGTCTGGTCGCCGGTGCTTTGTTGGGGGTAGCGTTCCAAGCGTTGTACGATACGATCAAAGGCATCGTGGTTCGGAATGCCACCA TAAGAAGCAAGCTAGATTCATTGGCTGGTAAAGTGGAGAGGCTGAGCACCGAGTTCAAGGGCTTTGAAACAAGCTACCCAGCATTTGGTCTGAAAACAGA GACCCTTAAACTCCGAGATCTGCTCGAGAAAGCCAGCACCCTCGTCGTCGACTGTTCGGGGGTGGGCGCGCAAGTGCTCGAACCGGCTGGACACTTAAGT GCTTCGTTTGAGGAGTTCTTGAATGTGGATATACGGATTGATCAGGTCAGCCACATCCTAGAAATTGAGGTTAGGATTGTTGAGATGAACAAGAAGTTGG ACCTCATGTATGCGACAAACGTGCGCGGCGGCGGCGGCATGACGTCAAATGGCAGAGGGGACGGCAGGGCCAACCACGACAATGTTCGTCGTCGAAATTA TAAACCGCCCAGGCCTGCGAACCGAGTTTCAGTATGA
AA sequence Show only first row Show all	>Lus10000836 pacid=23148147 polypeptide=Lus10000836 locus=Lus10000836.g ID=Lus10000836.BGIv1.0 annot-version=v1.0 MDPSTGLVAGALLGVAFQALYDTIKGIVVRNATIRSKLDSLAGKVERLSTEFKGFETSYPAFGLKTETLKLRDLLEKASTLVVDCSGVGAQVLEPAGHLS ASFEEFLNVDIRIDQVSHILEIEVRIVEMNKKLDLMYATNVRGGGGMTSNGRGDGRANHDNVRRRNYKPPRPANRVSV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G50470		MLA10, HR3	INTRACELLULAR MILDEW A 10, hom...		Lus10000836 [exp]	0	1
AT1G08140		ATCHX6a	cation/H+ exchanger 6A, cation...		Lus10009077 [exp]	6.9	0.7151
AT3G50470		MLA10, HR3	INTRACELLULAR MILDEW A 10, hom...		Lus10000835 [exp]	10.6	0.6976
AT5G65470			O-fucosyltransferase family pr...		Lus10012732 [exp]	26.4	0.6638
					Lus10041663 [exp]	38.0	0.7040
AT3G55150		ATEXO70H1	exocyst subunit exo70 family p...		Lus10023455 [exp]	41.2	0.6848
AT4G30380		EXLB2	Barwin-related endoglucanase (...		Lus10031760 [exp]	45.4	0.6959
AT3G03430			Calcium-binding EF-hand family...		Lus10033587 [exp]	52.2	0.6778
AT5G65470			O-fucosyltransferase family pr...		Lus10002653 [exp]	59.7	0.6490
AT5G45890		SAG12	senescence-associated gene 12 ...		Lus10020730 [exp]	63.2	0.6752
AT3G62600		ATERDJ3B	DNAJ heat shock family protein...		Lus10022297 [exp]	74.6	0.5841

Compare expression of checked genes

Lus10000836 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.