Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22340 178 / 2e-52 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22370 168 / 4e-50 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22400 171 / 1e-49 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22360 171 / 1e-49 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22380 171 / 2e-49 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G78270 141 / 2e-38 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT1G05680 88 / 3e-19 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT5G59590 86 / 1e-18 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT3G46650 86 / 1e-18 UDP-Glycosyltransferase superfamily protein (.1) AT1G05675 83 / 1e-17 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013924 [exp] 257 / 2e-82 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013920 [exp] 250 / 3e-80 AT1G22400 488 / 3e-170 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013925 [exp] 248 / 4e-79 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013922 [exp] 242 / 9e-77 AT1G22400 533 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10000993 [exp] 238 / 4e-75 AT1G22380 563 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10039277 [exp] 231 / 2e-72 AT1G22400 499 / 3e-174 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013919 [exp] 221 / 1e-70 AT1G22380 318 / 2e-106 UDP-glucosyl transferase 85A3 (.1) Lus10013921 [exp] 216 / 5e-69 AT1G22380 320 / 3e-107 UDP-glucosyl transferase 85A3 (.1) Lus10013923 [exp] 221 / 9e-69 AT1G22400 537 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G098400 [exp] 215 / 2e-66 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 209 / 4e-64 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 207 / 2e-63 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052100 [exp] 203 / 9e-62 AT1G22360 612 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 203 / 9e-62 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 199 / 2e-60 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 199 / 3e-60 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G312600 [exp] 198 / 8e-60 AT1G22360 586 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 192 / 8e-58 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.016G021000 [exp] 192 / 1e-57 AT1G22360 561 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10000992 pacid=23162257 polypeptide=Lus10000992 locus=Lus10000992.g ID=Lus10000992.BGIv1.0 annot-version=v1.0 ATGCATTTTGTACAACAACGAGAACTTACCGAATGGCTCATGACCGCGCTTCAGTCTTCCCATCCAAGCTATCTCAACAATGGATTCCTGGACACACCTG TAGACTTCATTTCAGGATTGAGCAAGAACATCCGTTTGAAAGATTTCCCAACTTTCATCCGAACAACGAATGAAGGCGACACCATCATGTTCAATTTCTT ACAGAAAGAAGTACCAAAAGTCCGCCAAGCATCCGCCTTCGTTATTAACACATTCGACCCTCTAGAGCATGAAGTCTTGGAAGCTCTGTCTACATTCTCC CCGAATCTCCTTACGATTGGCCCACTGAACATGCTAGTCCATCAAGCCGACGATCTCAAGAACATCAACACAAATTTATGGGTAAAAGAGTCGGAATGTG TGCAATGGCTCGACAGGAAAGAGCCCAACTCGGTTCTCTACGTGAACTTCGAAAGCATTACCGTGATGACTCCTGATCAGATGACCGAGTTTGCGTGGGG CCTCGCGAAAAGCGAGAAGCCCTTCTTGTGGGTGATTAGGGTGGATCTTATTTATGGAACAAATTCGGCAGGAACAAATTCCGAAGCACCCTTCGGTCGG AGGGTTTCTGAGTCACATGGGGTGGAACGCGACGCGGGAGAGCTTGTCGTATGGGGTGCTTATGATATGCTGGCCGTTCTTTCGCAGAGCAACAGAAGAA CTGCTTCTACGCTTGTGAGGAATGGGGGGGGTTGGAATGGAGATCAACCCCGAAGTGAAGAGGGAAGAAGTGGAGAAGCTTGTGATAGAAGTTATGGATG GGAGAAAGGTAAGGAGATCAAAAGGAAAGCCATGGAGTGGAAATCGAAGGCGGAAGAAGCTACTCAACCGGGTGGATCGTCGTTACGAAATGGTTGA
AA sequence Show only first row Show all	>Lus10000992 pacid=23162257 polypeptide=Lus10000992 locus=Lus10000992.g ID=Lus10000992.BGIv1.0 annot-version=v1.0 MHFVQQRELTEWLMTALQSSHPSYLNNGFLDTPVDFISGLSKNIRLKDFPTFIRTTNEGDTIMFNFLQKEVPKVRQASAFVINTFDPLEHEVLEALSTFS PNLLTIGPLNMLVHQADDLKNINTNLWVKESECVQWLDRKEPNSVLYVNFESITVMTPDQMTEFAWGLAKSEKPFLWVIRVDLIYGTNSAGTNSEAPFGR RVSESHGVERDAGELVVWGAYDMLAVLSQSNRRTASTLVRNGGGWNGDQPRSEEGRSGEACDRSYGWEKGKEIKRKAMEWKSKAEEATQPGGSSLRNG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22340		ATUGT85A7	UDP-glucosyl transferase 85A7 ...		Lus10000992 [exp]	0	1
AT1G80320			2-oxoglutarate (2OG) and Fe(II...		Lus10041279 [exp]	12.7	0.7984
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10024360 [exp]	36.5	0.7264
AT1G18530			EF hand calcium-binding protei...		Lus10039961 [exp]	45.0	0.7488
AT4G20140		GSO1	GASSHO1, Leucine-rich repeat t...		Lus10033519 [exp]	187.0	0.6944
AT3G47570			Leucine-rich repeat protein ki...		Lus10035726 [exp]	195.8	0.6912
AT1G05260		RCI3A, RCI3	RARE COLD INDUCIBLE GENE 3, Pe...		Lus10015580 [exp]	259.3	0.6889
AT3G12690		AGC1.5	AGC kinase 1.5 (.1.2.3)		Lus10001757 [exp]	261.0	0.6867

Compare expression of checked genes

Lus10000992 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.