Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24020 68 / 3e-13 MLP423 MLP-like protein 423 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001037 [exp] 541 / 0 AT1G24020 68 / 7e-14 MLP-like protein 423 (.1.2) Lus10014241 [exp] 301 / 7e-102 AT1G24020 61 / 5e-12 MLP-like protein 423 (.1.2) Lus10008023 [exp] 199 / 1e-60 AT1G63460 265 / 9e-91 glutathione peroxidase 8 (.1) Lus10001042 [exp] 191 / 6e-59 AT1G24020 69 / 5e-15 MLP-like protein 423 (.1.2) Lus10001041 [exp] 188 / 6e-58 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10003451 [exp] 187 / 2e-57 AT1G24020 73 / 7e-17 MLP-like protein 423 (.1.2) Lus10000474 [exp] 179 / 3e-54 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10032958 [exp] 132 / 4e-37 ND / Lus10015774 [exp] 128 / 2e-34 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G096000 [exp] 58 / 7e-10 AT1G24020 188 / 3e-62 MLP-like protein 423 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family
Representative CDS sequence Show only first row Show all	>Lus10001036 pacid=23171552 polypeptide=Lus10001036 locus=Lus10001036.g ID=Lus10001036.BGIv1.0 annot-version=v1.0 ATGTTCGATTCCATAGAAGTTCATATGTTTTCCTCTGCCAACGATGTTTGGAGTGCCATCACTGCGGCCACTGCGGTTTATCCCAGGGCCATTCGTAACC TCTACCAGCAAATCGCAGTTGTTGCTGGCGACGGTTACACCGCAGGTTCTACTCGCACCATAACTTTCGGCCCTGGTAGTTTCAGTCGTGTTGTGCAGAA GGGGACGGAGAAGATCATTGACGTTGACAATGGCGAGCTGAGTATTGAGTCGATCTTTAGCTACGATGGAGGGTTCGTGCCAACGTTGTTCGACAGCTTT CGCATGAAAATAACTGTGGTGAAATCAGCTGCCCAAATCAGAGCTGCTGGGTGCATACTTAAATTGGAGTTCGATTACGGTAGATCGGAAGGCAACGCAG ACATAACCTACTTCAAGAATGTGATGACAGATGCTTACAAAGAGCTGGACAACTACCTTAGGAATAACAGCCCCAGTGAAAGACGATGGGGCTACAGGAA AGATGATGTTGGATTTGAATGTGTAAACTTCCCTCATGTAATACGCTCCAGTAGTCAAGTTGGAGATGAGCCATATGTGGCAGCAAGTATCGCCAACATG GTGTACCATGTTACTGATGTGAAGGAGCCAAATTGGTGTATTCCGATTCATATTAAACCGAGGGACTTGTATAAAATGGGTGATGAAACCAATTCAGAAT ATGTATCTAAGGCATTCGGCGCCAAGAGTTGCCTAATGTTGATAATGGATCAAACCAATCTCTCTCACGACGTTATGGGAGATAGCAGCGTTGGAGGAAT GGCGGTGATGATGATGATCAGCGGCGTGCAGCGGAGAAGGAGGCGTCGGAGTGGTATGTGTGTTGCATGTACGATGAAAGTGGACGGTCAGAGAGTGGAG CAACGTTGGGCAGGATGGGAGGAGGATTTTTATCGAGTTGGGCGCGTGTCAAGTGCCTTACAAACGATTGGACCAGTACCTAAGATAGGTTCTTGGGAAG ATCATCAAACTGGAACGCTTCCCCATTGGCCACGAAGATTGGCGATATATGAGCGACTTGGACAAGGTCGATTGTTGGAATCAACTCATAGAGGAGGAAG AAAAGGAGGGCCAATTAGTAGGAAAGACTTCTTTCTAGAAACTCACAAGTTAGGTAGGAAGAAGAATAAGTTTTCCAATGATGCAACGAAAGAGATTTAT ATTGGTCTGGATGATGCTATGGGAAGATGCTATGAAAGAAAAGAGAAGCCGAAAAGAGTGTGTCATATGGAATTTGTCAAGAAGTCTTCAGTGGTGTGTG GTTCGAGTTCAAGAAGCACACAAATTCCTTTTCCACCTCGAGGAGTTCAAGCTGAGGATCCGGTCATGCGACAGTTTGCGAAACTTATGCTTGCGGAGTT TTAA
AA sequence Show only first row Show all	>Lus10001036 pacid=23171552 polypeptide=Lus10001036 locus=Lus10001036.g ID=Lus10001036.BGIv1.0 annot-version=v1.0 MFDSIEVHMFSSANDVWSAITAATAVYPRAIRNLYQQIAVVAGDGYTAGSTRTITFGPGSFSRVVQKGTEKIIDVDNGELSIESIFSYDGGFVPTLFDSF RMKITVVKSAAQIRAAGCILKLEFDYGRSEGNADITYFKNVMTDAYKELDNYLRNNSPSERRWGYRKDDVGFECVNFPHVIRSSSQVGDEPYVAASIANM VYHVTDVKEPNWCIPIHIKPRDLYKMGDETNSEYVSKAFGAKSCLMLIMDQTNLSHDVMGDSSVGGMAVMMMISGVQRRRRRRSGMCVACTMKVDGQRVE QRWAGWEEDFYRVGRVSSALQTIGPVPKIGSWEDHQTGTLPHWPRRLAIYERLGQGRLLESTHRGGRKGGPISRKDFFLETHKLGRKKNKFSNDATKEIY IGLDDAMGRCYERKEKPKRVCHMEFVKKSSVVCGSSSRSTQIPFPPRGVQAEDPVMRQFAKLMLAEF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10001036 [exp]	0	1
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10019435 [exp]	3.7	0.7058
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10001037 [exp]	4.7	0.7520
AT5G14750	MYB	WER1, WER, AtMY...	WEREWOLF 1, WEREWOLF, myb doma...		Lus10007008 [exp]	4.9	0.6625
AT1G70690		HWI1, PDLP5	PLASMODESMATA-LOCATED PROTEIN ...		Lus10028046 [exp]	6.6	0.5477
AT5G12060			Plant self-incompatibility pro...		Lus10023085 [exp]	6.8	0.7173
AT2G03630			unknown protein		Lus10026665 [exp]	7.7	0.7077
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10006693 [exp]	8.3	0.7173
AT5G18460			Protein of Unknown Function (D...		Lus10006861 [exp]	9.6	0.7173
AT4G12490			Bifunctional inhibitor/lipid-t...		Lus10024623 [exp]	11.0	0.6643
AT2G17030			F-box family protein with a do...		Lus10022619 [exp]	11.7	0.7072

Compare expression of checked genes

Lus10001036 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.