Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11060 592 / 0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1) AT1G61030 573 / 0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005857 [exp] 1239 / 0 AT1G11060 653 / 0.0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1) Lus10011196 [exp] 719 / 0 AT1G11060 614 / 0.0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1) Lus10018478 [exp] 716 / 0 AT1G11060 611 / 0.0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G039900 [exp] 771 / 0 AT1G11060 662 / 0.0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1) Potri.011G049300 [exp] 744 / 0 AT1G11060 674 / 0.0 WAPL (Wings apart-like protein regulation of heterochromatin) protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07814 [flax] [poplar] WAPL Wings apart-like protein regulation of heterochromatin
Representative CDS sequence Show only first row Show all	>Lus10001211 pacid=23173062 polypeptide=Lus10001211 locus=Lus10001211.g ID=Lus10001211.BGIv1.0 annot-version=v1.0 ATGATTGTCAGGACGTACGGCCGCCGGAGCAGCAGAAGCTCATTTTCCGATTCCCTCGACGACGATGGAGATGGCGACAATTCGTTCCTCGGAAGAGGAG GAGGCGGAGATTCTTTCTCCCTATCGCAAGAAACCCCGTCTCAGAGCTTCTACGAAATCCCTTTCTCCTCACAGGAATCCTCATCTTTCTGGCCTAATTC TTCCCAGGACGATTTTCCACCCCGGCCAAGGAAGTCTAAGAAACCGAGAAATGGGAAGCTGGAGGAGCAGGGACGGCGGGCTTGGGTTCCTTTGACTTCT ACGACGTTGATGGAGGCACAGGAATATGGGGAGATGATGGAGCACGTCGATGAGGTTAATTTCGCGCTCGATGGGCTGAGGAAAGGGCTGCCTGTTAGGA TCAGGAGGGCGAGCTTGCTGTCGCTATTGACAATTTGTGGCACGGCGCAGAAGCGGCGGCTTCTGAGGGCTCAAGGGACGGTGAAAACAATAGTGGATGC AGTCTTGGGACTTTCCTTTGATGATACTCCCAGCAATCTGGCAGCTGCGACTCTTTTCTACGTTTTAAACAGCAATGGTCAAGATGATCACATGTTAGAA TCACCCAGTTGCATTCGTTTTTTGCTTAAATTGTTAAAGCCGGTACCATCTGTGGCCACTGAGGACAAGACTCGAAGTTTAGGCAGCAAACTAATAGCTA TACAACGAGATTCTAACATCTTACGTGATACAAGAAAAGTGGTGGATTCAGGTTCTTCTGCCATTTTAGCCAAAGTTGATGACATACTAGTGTGTTCTAA GGTCATGCAGTCTCACTGTGGGCACAATAAGGGAATTGAGAGACCAGAATTAACGTCAAAATATATAGCTCTCTTGACTATGGAGAAAGCTTGCTTATCT AAGATCGCTCTTGAAGATACTTCAGGCATGGTAAGGAAGATGGATGGAAACTTTAAGGAGAAACTGCGAGAGCTTGGAGGACTCGATGCTGTCTTTGAAG TTGCTATGAGCTGCTACTCTGTTATCGAGAATTTGGAGAGTCAACATTCATCCTCGTCTCAGTGTGCACAAGATGTCTTGGTCCTGCCGAGCCTCGTGAT GCTTTTGAAATGTTTGAAGATCATGGAGAATGCTACATTCTTGAGCAAAGAGAACCAGGACCATTTACTTATGATGAAAAGAAACTCTGACTCTCATGGT AGCCGAATATCTTTTACCAAACTTATCATAAGTGTCATCAAGATTTTATCAGGTCTCTATCTTCGTCGAACCTCCGCATCTGCTGATGGAAAGTCGTGTA GCCTCTCCAATTGCGAGTACAAAGTAGAAAGCAATGGAGTAATATGCATCAGTTCTTCAGAATCAGACTGCTATATCGTAGAAGTGAGCGAATCTAAAAG AAACTCTGGCAAATCAGCTGCACAACTGGCTCTTTCTGTTTCCAGAGAAGCTACCACTACAACCATGGAAGACAATAATCTGCTAAAGATGAGAGTTCGC TCATCGCTGTTCAGTTCAAGCAGTCAAACATCAAGGAGTTCTAATGGCACACTTTCTGCTAGTAAAGGGTCAACGACGAATTATGATCTTGTTGACATAG ACAACAAACTTTCTGATAGTGAAGATCCCTTTGCATTTGATGGTGATGATGACTTAGAGCCGTCAAAGTGGGATGTCTTATCTGGTAAAAGAAGAAAAGT ATCTCAAACCTCGGCAGTGATCAAACCTGCAAAAGAACGTGAGAGAGATCCTTATGTAATAGAGCTTCAAGGAGAATTCAGTAATTCTGCAAGGTCTGAA CATGAACAACTCAACGGAGGAGGATACCTTCAGTCTTCAGGAACTGACTCCAATTCGATTGTTCCAGATGAAGAATGCTCAACTCTTCTATCTGAGTGCC TCCTTACTTCTGTTAAGGTTCTGATGAATTTAACGAACGAAAACCCAGTTGGCTGCCGGCAAGTTGCTGCTTGCAGAGGGCTGGAAACTATGTCTTCATT GATAGCTGATCACTTCCCTTCATTCGACTTACCTTCCTCTCCAGAAGACCCTTCAAGTTCTGCACTTCAGCATCCAGACGAAGGTCGTCTGACTGATCAA GATTTGGATTTTCTCGTCGCAATATTGGGCCTCCTTGTTAACCTGGTGGAGAAAGACGGCCAAAACAGGTCAAAGCTTGCGTTGGCTACTGGCTCGTTAG CCAACCTGCAAGGATCAGAAAACAATAGTCAGGGGGATGTGATTCCACTGCTCTGTTCGATCTTTAAAGCCCACCGTGGCAATGATGATCAATCCGAACA AGGAAATGGCATAGAATGGGGTGATGAGGAAGCCATGATGGAAGGAGAGAAAGAAGCAGAGAAAATGATCGTAGAGGCTTATGCAGCGCTGCTTCTCGCG TTTCTTTCAACCGAAAGCAAGAGTACACGTGACTCCATCTCGGAGTGCCTCCCGGACCAGAACCTCAGTGTTCTCGTCCCTGTACTGGAGAGATTTGTGG CGTTCCATTTGTCGTTGAACATGATCTCGCCGGAAACTCACAAAGCGGTGAAAGAAGTGATTGAGTCGTGTAGGGTCCATGAAAGTTTTTAA
AA sequence Show only first row Show all	>Lus10001211 pacid=23173062 polypeptide=Lus10001211 locus=Lus10001211.g ID=Lus10001211.BGIv1.0 annot-version=v1.0 MIVRTYGRRSSRSSFSDSLDDDGDGDNSFLGRGGGGDSFSLSQETPSQSFYEIPFSSQESSSFWPNSSQDDFPPRPRKSKKPRNGKLEEQGRRAWVPLTS TTLMEAQEYGEMMEHVDEVNFALDGLRKGLPVRIRRASLLSLLTICGTAQKRRLLRAQGTVKTIVDAVLGLSFDDTPSNLAAATLFYVLNSNGQDDHMLE SPSCIRFLLKLLKPVPSVATEDKTRSLGSKLIAIQRDSNILRDTRKVVDSGSSAILAKVDDILVCSKVMQSHCGHNKGIERPELTSKYIALLTMEKACLS KIALEDTSGMVRKMDGNFKEKLRELGGLDAVFEVAMSCYSVIENLESQHSSSSQCAQDVLVLPSLVMLLKCLKIMENATFLSKENQDHLLMMKRNSDSHG SRISFTKLIISVIKILSGLYLRRTSASADGKSCSLSNCEYKVESNGVICISSSESDCYIVEVSESKRNSGKSAAQLALSVSREATTTTMEDNNLLKMRVR SSLFSSSSQTSRSSNGTLSASKGSTTNYDLVDIDNKLSDSEDPFAFDGDDDLEPSKWDVLSGKRRKVSQTSAVIKPAKERERDPYVIELQGEFSNSARSE HEQLNGGGYLQSSGTDSNSIVPDEECSTLLSECLLTSVKVLMNLTNENPVGCRQVAACRGLETMSSLIADHFPSFDLPSSPEDPSSSALQHPDEGRLTDQ DLDFLVAILGLLVNLVEKDGQNRSKLALATGSLANLQGSENNSQGDVIPLLCSIFKAHRGNDDQSEQGNGIEWGDEEAMMEGEKEAEKMIVEAYAALLLA FLSTESKSTRDSISECLPDQNLSVLVPVLERFVAFHLSLNMISPETHKAVKEVIESCRVHESF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11060			WAPL (Wings apart-like protein...		Lus10001211 [exp]	0	1
AT5G26760			unknown protein		Lus10005906 [exp]	1.0	0.9224
AT5G56290		EMB2790, PEX5, ...	EMBRYO DEFECTIVE 2790, ARABIDO...		Lus10027124 [exp]	3.5	0.9146
AT1G17720		ATBBETA, ATB BE...	Protein phosphatase 2A, regula...		Lus10042101 [exp]	4.5	0.9125
AT2G01460			P-loop containing nucleoside t...		Lus10025598 [exp]	4.9	0.9166
AT4G20850		TPP2	tripeptidyl peptidase ii (.1)		Lus10027482 [exp]	6.5	0.9117
AT3G06290		AtSAC3B	yeast Sac3 homolog B, SAC3/GAN...		Lus10012769 [exp]	7.9	0.9107
AT2G32700		MUM1, LUH	MUCILAGE-MODIFIED 1, LEUNIG_ho...		Lus10032614 [exp]	8.0	0.8697
AT1G32750		GTD1, TAF1, HAF...	TBP-ASSOCIATED FACTOR 1, HISTO...		Lus10027579 [exp]	8.9	0.9077
AT1G60490		PI3K, ATVPS34	PHOSPATIDYLINOSITOL 3-KINASE, ...		Lus10030885 [exp]	9.4	0.9125
AT5G06580			FAD-linked oxidases family pro...		Lus10012289 [exp]	9.5	0.8338

Compare expression of checked genes

Lus10001211 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.