Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009461 [exp] 115 / 9e-33 AT1G35430 40 / 1e-04 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001289 pacid=23166367 polypeptide=Lus10001289 locus=Lus10001289.g ID=Lus10001289.BGIv1.0 annot-version=v1.0 ATGGCGCCTTCGTTCTCCTTCTTCTCGAGAATCCCTTTTCCTCGCCGTCATGAACAAATCCGATCTCCGCCGCCGTCGATTCCAACCGAATCGATGGCGA TCCCAACTCGAATCCGATGCCTACTCATCCTCCTCTTCTCCCCCTTAATCCTCCCCTTACTCTTCCTAACTTTCCCCTTGGTATTCGCGCTGGGGCTCTG CCTCTGGATCCGATTCTGCTGTCGGAGACGGAATCGACAGCGGCGGAGGCGCCGTCTGGTCGGGAAGAAGAAATCGGCGCATAAGGAGGAGGAGGAGGAA TCAGCGGCCGCTGAGCTGCGGCGGTGCGAGGAAGGGCTGAAGGAAGCAGAGGATGAAGAGGAGGACGGTGAAATTGGACGGCTACTTCAGGTTTACTTGG AAGATCAGCTGCGGCTGGCGAAGTCGATTGTTTCCGGCGATAAGACTGAGAGCAGCGGCGTCGGCGGCGGTGGAATTCGGAGTCGCCGAGACGACGTCGA TTCCAAAACTGTCCCTCTGTTGACCTAA
AA sequence Show only first row Show all	>Lus10001289 pacid=23166367 polypeptide=Lus10001289 locus=Lus10001289.g ID=Lus10001289.BGIv1.0 annot-version=v1.0 MAPSFSFFSRIPFPRRHEQIRSPPPSIPTESMAIPTRIRCLLILLFSPLILPLLFLTFPLVFALGLCLWIRFCCRRRNRQRRRRRLVGKKKSAHKEEEEE SAAAELRRCEEGLKEAEDEEEDGEIGRLLQVYLEDQLRLAKSIVSGDKTESSGVGGGGIRSRRDDVDSKTVPLLT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G35430			unknown protein		Lus10001289 [exp]	0	1
AT5G52880			F-box family protein (.1)		Lus10027547 [exp]	2.2	0.7996
AT1G19140			unknown protein		Lus10039930 [exp]	4.6	0.7887
AT1G67970	HSF	AT-HSFA8	heat shock transcription facto...		Lus10001591 [exp]	6.3	0.7803
AT1G04760		ATVAMP726	vesicle-associated membrane pr...		Lus10018296 [exp]	6.5	0.7956
					Lus10022888 [exp]	6.9	0.7460
AT3G13480			unknown protein		Lus10010318 [exp]	8.8	0.7560
AT5G52980			unknown protein		Lus10000151 [exp]	11.8	0.7447
AT3G58090			Disease resistance-responsive ...		Lus10009074 [exp]	13.0	0.7729
AT2G23780			RING/U-box superfamily protein...		Lus10022492 [exp]	13.7	0.7849
AT5G49550		BLOS2	BLOC subunit 2, unknown protei...		Lus10019163 [exp]	17.3	0.7448

Compare expression of checked genes

Lus10001289 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.