Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G02600 643 / 0 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 552 / 0 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G24250 430 / 8e-147 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G33670 371 / 2e-123 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G61560 360 / 3e-118 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G11310 354 / 9e-116 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G42560 347 / 2e-114 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G39200 346 / 1e-112 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT2G17480 340 / 3e-110 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT3G45290 335 / 3e-109 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027093 [exp] 494 / 2e-171 AT4G02600 580 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10008340 [exp] 492 / 1e-170 AT4G02600 576 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10026276 [exp] 458 / 4e-157 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 373 / 1e-122 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 367 / 2e-120 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 363 / 4e-120 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 352 / 2e-114 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 348 / 1e-113 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 347 / 6e-112 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G069900 [exp] 639 / 0 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.007G146900 [exp] 574 / 0 AT4G02600 613 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000800 [exp] 564 / 0 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 563 / 0 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.001G078800 [exp] 463 / 1e-159 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 375 / 4e-124 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 375 / 1e-123 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 370 / 2e-122 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 358 / 2e-117 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 349 / 9e-114 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10001336 pacid=23146561 polypeptide=Lus10001336 locus=Lus10001336.g ID=Lus10001336.BGIv1.0 annot-version=v1.0 ATGGGGGAAGAAGGGTACGATGAAGGAGTAAATTTGGAGTTCACACCAACATGGATTGTTGCTGGGATATGCAGTGTGATTGTGGCCATATCACTTCTTA TGGAGCGTCTTCTTCATTTAACTGGCACGTATCTCAAGCGCCACAACAAAAAGCCTCTCTATCAATCCCTTCAAAAAGTTAAAGAAGAATTAATGCTAAT GGGGTTCATATCCCTTCTGCTCACGGTGTCACAAAACATGGTGGCTAGATTCTGTGTAAACCAAGATTTCCTCACCAAAATGCTTCCTTGCCCTCTCTCT GCTGAAAAACTAGACGGCAAGGAACCGCCTCATCATAGTCGACGACTTTTGGCTGAAGCTGCAGAGGCTGTTTCAGATTCATTATCTAGCAGTGGCTACT GTGCCAAGAAGGGAAAGGTGCCAATGCTATCTCTAGAGGCTATACATCATCTTCATATATTCATCTTTGTGCTTGCAATTGTTCATGTCAGCTTTTGTGC TCTCACTGTTATGTTTGGAATGGCAAGGATTCGTCAGTGGCATGAATGGGAAAGTAAGATTGAGAAAGAACATTATGATGCAGAACAAGCACTGAAGAAG ACGTTCACTCATGTTCGTGAGCATTCGTTCATCAGGGCCAATTTTCTAGGCATTGGTAAAGATTCAGAAGTACTTGGTTGGTTGTATGCGTTCGTGAAGC AATTCTATGCATCTGTTACCAGGACAGACTACCTAACTTTACGGCTAGGTTTTATCATGACACATTGCCGAGGGAACCCCAAGTTCAATTTTCACAGGTA TATGATGCGTGCACTTGAAGATGACTTCAAGAGAGTTGTTGGAATAAGGCAGTTGGTATCTCTGGATCTTTGTGGTGGTCTTCTTGTTGTTGAACGATGG CATACATACTTCTGGATAGCATTCATCCCATTTATTCTTTTACTTGTTGTGGGAACCAAGTTGGAGCATGTAATCTCCCAGTTGGCTCATGAGGTGGCTG AGAAGCACATAACCATTGAAGGGGCATTAGTCGTTCATCCATCTGATGACCACTTCTGGTTCAGCAAACCCAATATAGTCCTCTACTTGATCCATTTCAT CTTGTTTCAAAATTCTTTTGAGATTGCATTTTTCTTCTGGATTTGGGTTCAATATGGTTTCGACTCGTGCATAATGGGGCACGTTGGATACATCATCCCA AGGCTACTTATAGGGATATTTATCCAAGTCCTTTGCAGCTACAGCACCCTTCCACTATATGCCATTGTCACACAGATGGGAAGCTCTTTCAAGAAGGCGA TATTCGACGAAGATGTGCAGGCCAGCCTCGTAGATTGGGCTGCAAGGGTGAAAAGAAAGAAAGAAGTGAAGTCATCAATGGCAACAGATCAAGGAAGTAG TCCTAAAGGATTTACTCCAACGAAGATAGCCAAACTAAAAGGGCTTATGACAAAACAAGAGGTGTCTAAAGAAGCATCTCCTCCACATCAAGACCATGAT ACTGCGGAGAATGTTGCAGCTGATACATCTGCAGCAGCAGCTGCTGCTGCTTTTGAGGATATTCAACTTTCCCCTGCTGATGGTAGAAAGAAATAG
AA sequence Show only first row Show all	>Lus10001336 pacid=23146561 polypeptide=Lus10001336 locus=Lus10001336.g ID=Lus10001336.BGIv1.0 annot-version=v1.0 MGEEGYDEGVNLEFTPTWIVAGICSVIVAISLLMERLLHLTGTYLKRHNKKPLYQSLQKVKEELMLMGFISLLLTVSQNMVARFCVNQDFLTKMLPCPLS AEKLDGKEPPHHSRRLLAEAAEAVSDSLSSSGYCAKKGKVPMLSLEAIHHLHIFIFVLAIVHVSFCALTVMFGMARIRQWHEWESKIEKEHYDAEQALKK TFTHVREHSFIRANFLGIGKDSEVLGWLYAFVKQFYASVTRTDYLTLRLGFIMTHCRGNPKFNFHRYMMRALEDDFKRVVGIRQLVSLDLCGGLLVVERW HTYFWIAFIPFILLLVVGTKLEHVISQLAHEVAEKHITIEGALVVHPSDDHFWFSKPNIVLYLIHFILFQNSFEIAFFFWIWVQYGFDSCIMGHVGYIIP RLLIGIFIQVLCSYSTLPLYAIVTQMGSSFKKAIFDEDVQASLVDWAARVKRKKEVKSSMATDQGSSPKGFTPTKIAKLKGLMTKQEVSKEASPPHQDHD TAENVAADTSAAAAAAAFEDIQLSPADGRKK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G02600		MLO1, ATMLO1	MILDEW RESISTANCE LOCUS O 1, S...		Lus10001336 [exp]	0	1
AT3G47870	AS2	ASL29, SCP, LBD...	SIDECAR POLLEN, ASYMMETRIC LEA...		Lus10033111 [exp]	2.2	0.7655
AT1G32420			F-box and associated interacti...		Lus10011190 [exp]	18.2	0.7201
AT4G14600			Target SNARE coiled-coil domai...		Lus10036461 [exp]	19.6	0.6609
AT1G55915			zinc ion binding (.1)		Lus10035761 [exp]	29.2	0.6819
AT4G18180			Pectin lyase-like superfamily ...		Lus10016824 [exp]	38.2	0.6327
AT4G15910		ATDI21	drought-induced 21 (.1)		Lus10037497 [exp]	39.2	0.6544
AT1G03890			RmlC-like cupins superfamily p...		Lus10033893 [exp]	55.6	0.6578
AT3G47570			Leucine-rich repeat protein ki...		Lus10009394 [exp]	79.4	0.6345
AT2G30970		ASP1	aspartate aminotransferase 1 (...		Lus10000181 [exp]	106.0	0.6258
AT5G64360		EIP9	EMF1-Interacting Protein 1, Ch...		Lus10002650 [exp]	106.9	0.5995

Compare expression of checked genes

Lus10001336 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.