Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G33590 509 / 1e-178 unknown protein AT4G33600 501 / 2e-175 unknown protein AT3G18170 42 / 0.0008 Glycosyltransferase family 61 protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041131 [exp] 387 / 9e-131 AT4G33590 443 / 3e-153 unknown protein Lus10036462 [exp] 213 / 4e-66 AT4G33590 218 / 5e-69 unknown protein Lus10036463 [exp] 135 / 2e-37 AT4G33590 162 / 3e-48 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G048300 [exp] 577 / 0 AT4G33600 573 / 0.0 unknown protein Potri.007G112500 [exp] 555 / 0 AT4G33590 564 / 0.0 unknown protein Potri.002G102300 [exp] 435 / 3e-149 AT4G33600 464 / 3e-161 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001351 pacid=23162025 polypeptide=Lus10001351 locus=Lus10001351.g ID=Lus10001351.BGIv1.0 annot-version=v1.0 ATGACGAGTGGTTATCATCTCCGGTGTTATTCCCCAAAGCTATGGATCGGACTCATGTCCATCTCCGCCGGCACAATCTTCCTCCTCTTCCAATTCGAAT CCCTCCACCTCCACTACTACTACTCTACGCTTCCTTCTTCAACTACTTCTTGGTTCTCCTCCTTCATCCACCACCACCAACCATGTGAATGCGATCATCA TCCGAATGTGACCGAAAAGCTGCAACAGTCGGTCACGTTTCTCCCGCTCAAGGACTTGCGTTACTCCGTGAAGCCACTCGACGGCCACACATGGTTCATG AGCTCCCTTTACGATTTCCAAGACCAGGCTGGTGGGGTCCAGTACCAGCAGTTTCCTTCTAAGAAGTCTCAGAACAGAGTACTCTGTTTCAAGGGCAGGG ACAATCACGACGGATCTTGGAACTACTACGCGCTTGCTTGGAAACAAGCCCTCCCTGTCAACTCTACCCTTATGAAAGGTTTGACTTTCATCTCCTACAA TCATTACAACTACGACAACATCTGGCACGGACTCTCTGCCCTGGTGCCCTTTGTTGCGTGGCACATAAGCAACAACCGTTGTGGGGAGTCTCCCGACCGG TGGCTCCTGTACCATTGGGGAGAGATGAGGCTTGGGATGGGACGTTGGTTGACTGCGCTGACCGAAGCTACATTCGGCGGTGGGCCTCCTACAGTGGAAG GGTTTGGGGAGCTATTTAAGATGGGGGATCATCGTCATGAGGCGGCTGTTTGTTTCGAGAAGGCGGTGGTGATGAGGCACAATGAAGGTGGGATGTCGAA TCAGAAGAGGGTGGAGACTTATGACTTGATGAGGTGTAAGGCAAGGGCTTACTGTAACGTGACCCTTGCCGGAGGAAGGGTTGACGAAAGGGGCCGGTCG CCGGTGATTGGGATGACATTGTTCATGAGGACTGGTGGGAGGTCGTTTAGGAATGAAAGTGAAGTCATTAGGGTATTTGGGAAAGAGTGTGACAAGGTTG ATGGGTGCAGGCTTACGGTGGCTTACTCCAATAATCTCACTTTCTGTGAACAGGTGAAAGTGATGAGCTCGACGGACATACTAATATCCCCACACGGAGC ACAGCTGACAAACATGTTCTTCATGAACAGAAACAGCAGTGTCCTTGAGTTCTTCCCTAAAGGATGGCTTAAGGTTGCAGGTGTCGGCCAGTTTGTTTAC CATTGGATTGCTAACTGGTCGGGGATGAACCACCGCGGTGCCTGGCGAGACCCTGACGGAGCTCACTGCCCCTTCCCAGAGGACGCCCCCCCCCGCCGGT GTATGTCCATCTTCAAGGACGGCACCATCGGAGTCAACCACACCCATTTTTCACTGTGGGCCCAGACTGTTCTTGCTGACGTCAGACTTAGGAAGCTGCA AGAACAGTCAAAGCTCTCCGTTGACCGTACCGCCAATGTGGACGAACATTCTCCTGCCACTTGTCTTTGTGGTGGTTGA
AA sequence Show only first row Show all	>Lus10001351 pacid=23162025 polypeptide=Lus10001351 locus=Lus10001351.g ID=Lus10001351.BGIv1.0 annot-version=v1.0 MTSGYHLRCYSPKLWIGLMSISAGTIFLLFQFESLHLHYYYSTLPSSTTSWFSSFIHHHQPCECDHHPNVTEKLQQSVTFLPLKDLRYSVKPLDGHTWFM SSLYDFQDQAGGVQYQQFPSKKSQNRVLCFKGRDNHDGSWNYYALAWKQALPVNSTLMKGLTFISYNHYNYDNIWHGLSALVPFVAWHISNNRCGESPDR WLLYHWGEMRLGMGRWLTALTEATFGGGPPTVEGFGELFKMGDHRHEAAVCFEKAVVMRHNEGGMSNQKRVETYDLMRCKARAYCNVTLAGGRVDERGRS PVIGMTLFMRTGGRSFRNESEVIRVFGKECDKVDGCRLTVAYSNNLTFCEQVKVMSSTDILISPHGAQLTNMFFMNRNSSVLEFFPKGWLKVAGVGQFVY HWIANWSGMNHRGAWRDPDGAHCPFPEDAPPRRCMSIFKDGTIGVNHTHFSLWAQTVLADVRLRKLQEQSKLSVDRTANVDEHSPATCLCGG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G33590			unknown protein		Lus10001351 [exp]	0	1
					Lus10004308 [exp]	5.5	0.8448
AT5G51310			2-oxoglutarate (2OG) and Fe(II...		Lus10009025 [exp]	7.7	0.8652
AT2G36690			2-oxoglutarate (2OG) and Fe(II...		Lus10023890 [exp]	9.2	0.8226
AT2G23630		SKS16	SKU5 similar 16 (.1)		Lus10000837 [exp]	9.8	0.8771
AT3G26270		CYP71B25	"cytochrome P450, family 71, s...		Lus10027427 [exp]	17.0	0.8604
					Lus10025106 [exp]	19.3	0.8159
AT3G54220	GRAS	SGR1, SCR	SHOOT GRAVITROPISM 1, SCARECRO...		Lus10003540 [exp]	27.1	0.7862
AT1G60790		TBL2	TRICHOME BIREFRINGENCE-LIKE 2,...		Lus10030900 [exp]	43.9	0.8444
AT3G18200			nodulin MtN21 /EamA-like trans...		Lus10027251 [exp]	68.8	0.8204
					Lus10025731 [exp]	84.3	0.8173

Compare expression of checked genes

Lus10001351 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.