Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 399 / 8e-134 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT5G53760 235 / 1e-70 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT1G26700 230 / 8e-69 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT4G02600 193 / 4e-55 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 184 / 6e-52 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT1G61560 179 / 5e-50 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G39200 177 / 4e-49 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 176 / 1e-48 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT4G24250 170 / 4e-47 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G33670 170 / 8e-47 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012698 [exp] 558 / 0 AT1G11000 305 / 2e-97 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10015461 [exp] 364 / 4e-125 AT1G11000 200 / 6e-61 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10041893 [exp] 305 / 5e-97 AT1G11000 353 / 1e-114 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10028440 [exp] 248 / 6e-75 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10032669 [exp] 228 / 7e-68 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10043085 [exp] 219 / 1e-64 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10036120 [exp] 219 / 3e-64 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 187 / 2e-52 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 186 / 7e-52 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G218500 [exp] 428 / 6e-145 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.005G111400 [exp] 263 / 2e-81 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 242 / 2e-73 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 220 / 9e-65 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 191 / 2e-54 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.009G011900 [exp] 189 / 4e-53 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 181 / 2e-50 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.004G050000 [exp] 179 / 2e-50 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.001G078800 [exp] 178 / 7e-50 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 179 / 1e-49 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10001370 pacid=23170147 polypeptide=Lus10001370 locus=Lus10001370.g ID=Lus10001370.BGIv1.0 annot-version=v1.0 ATGGAGGAAGTGTTGATTAGGCAAGGGAGGTCTCTGGCTGAGACTCCTACTTATTCAGTGGCTTCCGTTGTCACTGTTCTTGTTTTCGTTTGCTTCATTG TTGAGCGGGCAATTTACAGATTCGGCAAGTGGCTGAAGAAGACTAGAAGGAAGGCTTTGTTTGCTTCTTTGGAGAAAATTAAAGAAGAGCTGATGCTGCT TGGGCTTATATCTTTGTTGTTGGCGCAATGGGCAAGATGGATATCTGAGATTTGTGTAAATTCGTCTCTTTTCAGTAGTAAATTCTACCTTTGCTCCGAG CAAGATTATGGTGATGTTCAACGCCATCTCTTGCTTGAAACATTTTTGCCATCTTCCCCAAATGACACCACCGCCTATCTTCCTCACAAGGAAATAGCTC CCACTACTCATCAATGCGGTCAGGGTCGTGAACCATTCGTCTCGTTGGAGGGTCTCGAACAACTTCATCGGTTTTTGTTTGTTCTTGGCATCACTCATGT CTTGTACAGTTGTTTGGCAGTAGGTCTGGCCATGACCAAGAAACACAGGTTGCCCCTTTCCTACAACTTCCACAAGTACATGGTTCGGAGCATGGAAGAT GAATTTCAGGGTATATTGGGCATCAGCCCACCTCTTTGGGCTTATTCCATTATCTGTATATTCATCAACATTCATGGTTTGAATGTTTACTTCTGGCTCT CCTTCATCCCTGCCATTCTTGTTATGGTGGTCGGGACGAAGCTCCAGCATGTCGTGTCCATGCTAGCTCTTGGAATTGTTGAACAATCAGGGCCGCCTGT CGGAACTCAAGTGAAGCCTCGAGATGATTTGTTTTGGTTTGGTAAACCAGAAATTCTTGTGAGGTTGATTCAGTTCATAATCTTTCAGAATGCATTTGAG ATGGCAACCTTCATCTGGTCCTTGTGGGGTTTCAAGCAAAGATCCTGCTTCATGAAGAACCATTACATGATCATCATTCGATTAGTCTCTGGAGTGGTGG TCCAGTTCTGGTGTAGCTACAGCACAGTGCCACTAAATGTGCTTGTAACACAGATGGGTTCAAAGTGCAGGAAAGCACTAGTTGCTGAGAGTGTGAGAGA TTCACTCCACAGCTGGTGTAAGAGAGTGAAGGAGAGGTCAAAGCGCGACGCTGCACTGTCGATAGCCACGAGATCAGTGTGTTCGCTAGACACAGCCACG ATCGACGAAGGGGACGAGGAGGAGGTCAACACCATTGCATCAGGAGGAACCATCTCCAGGTCGTCATCCATGAACTCCCTTAATGAGATAACAACAGTTG AGGCTGCTGCTGAGGGGGCACAACACACAACAGATTCAAACAATGGCCGGCGTGGACAAGATGATGAGCTGTCATTGAGGATAGAAGCGTACTTGAACAA CAATGTAGCAGAACTTCATCATGTTAGTGATGATGAAGAAGAAGATGATCATGCCCACGGCAGCAATGAGGAAGAAGAGTCCAAAGTTGAGACCTTGCTG GACTTGTTTAGAAAAACTTGA
AA sequence Show only first row Show all	>Lus10001370 pacid=23170147 polypeptide=Lus10001370 locus=Lus10001370.g ID=Lus10001370.BGIv1.0 annot-version=v1.0 MEEVLIRQGRSLAETPTYSVASVVTVLVFVCFIVERAIYRFGKWLKKTRRKALFASLEKIKEELMLLGLISLLLAQWARWISEICVNSSLFSSKFYLCSE QDYGDVQRHLLLETFLPSSPNDTTAYLPHKEIAPTTHQCGQGREPFVSLEGLEQLHRFLFVLGITHVLYSCLAVGLAMTKKHRLPLSYNFHKYMVRSMED EFQGILGISPPLWAYSIICIFINIHGLNVYFWLSFIPAILVMVVGTKLQHVVSMLALGIVEQSGPPVGTQVKPRDDLFWFGKPEILVRLIQFIIFQNAFE MATFIWSLWGFKQRSCFMKNHYMIIIRLVSGVVVQFWCSYSTVPLNVLVTQMGSKCRKALVAESVRDSLHSWCKRVKERSKRDAALSIATRSVCSLDTAT IDEGDEEEVNTIASGGTISRSSSMNSLNEITTVEAAAEGAQHTTDSNNGRRGQDDELSLRIEAYLNNNVAELHHVSDDEEEDDHAHGSNEEEESKVETLL DLFRKT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10001370 [exp]	0	1
AT1G24160			unknown protein		Lus10002952 [exp]	5.8	0.8502
AT2G03350			Protein of unknown function, D...		Lus10037126 [exp]	6.5	0.8973
AT5G43080		CYCA3;1	Cyclin A3;1 (.1)		Lus10013886 [exp]	6.6	0.8724
AT5G14020			Endosomal targeting BRO1-like ...		Lus10041527 [exp]	7.9	0.8605
AT3G20300			Protein of unknown function (D...		Lus10009722 [exp]	11.4	0.8789
AT4G12520			Bifunctional inhibitor/lipid-t...		Lus10004348 [exp]	11.5	0.8817
AT1G13580		LOH3, LAG13	LAG One Homologue 3, LAG1 long...		Lus10029096 [exp]	13.3	0.8227
AT5G58300			Leucine-rich repeat protein ki...		Lus10034446 [exp]	16.4	0.7521
AT4G12520			Bifunctional inhibitor/lipid-t...		Lus10028929 [exp]	22.1	0.8702
AT4G09600		GASA3	GAST1 protein homolog 3 (.1)		Lus10014262 [exp]	22.8	0.8664

Compare expression of checked genes

Lus10001370 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.