Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G26990 124 / 4e-35 Drought-responsive family protein (.1) AT3G05700 122 / 2e-34 Drought-responsive family protein (.1) AT4G02200 113 / 9e-31 Drought-responsive family protein (.1.2.3) AT3G06760 111 / 5e-30 Drought-responsive family protein (.1.2) AT1G02750 111 / 6e-30 Drought-responsive family protein (.1.2) AT5G49230 106 / 3e-28 HRB1 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1) AT1G56280 98 / 3e-25 ATDI19 drought-induced 19 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013420 [exp] 249 / 5e-84 AT3G06760 124 / 3e-35 Drought-responsive family protein (.1.2) Lus10010305 [exp] 247 / 4e-83 AT3G06760 108 / 5e-29 Drought-responsive family protein (.1.2) Lus10002441 [exp] 230 / 6e-78 AT5G26990 95 / 3e-25 Drought-responsive family protein (.1) Lus10031467 [exp] 152 / 1e-45 AT5G26990 253 / 1e-85 Drought-responsive family protein (.1) Lus10037819 [exp] 110 / 1e-29 AT5G49230 198 / 3e-64 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1) Lus10015214 [exp] 97 / 1e-24 AT5G26990 194 / 5e-63 Drought-responsive family protein (.1) Lus10015412 [exp] 82 / 2e-18 AT5G26990 123 / 1e-34 Drought-responsive family protein (.1) Lus10017956 [exp] 72 / 3e-14 AT5G26990 74 / 8e-15 Drought-responsive family protein (.1) Lus10017097 [exp] 68 / 1e-13 AT5G49230 131 / 2e-38 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G011200 [exp] 160 / 3e-49 AT3G05700 250 / 1e-84 Drought-responsive family protein (.1) Potri.005G020900 [exp] 151 / 9e-46 AT3G05700 224 / 3e-74 Drought-responsive family protein (.1) Potri.010G000800 [exp] 149 / 6e-45 AT5G49230 190 / 5e-61 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1) Potri.014G125500 [exp] 144 / 1e-42 AT3G05700 148 / 2e-44 Drought-responsive family protein (.1) Potri.002G200500 [exp] 142 / 6e-42 AT3G05700 152 / 7e-46 Drought-responsive family protein (.1) Potri.008G213400 [exp] 139 / 6e-41 AT5G49230 196 / 2e-63 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1) Potri.011G057200 [exp] 87 / 2e-20 AT3G06760 110 / 2e-29 Drought-responsive family protein (.1.2) Potri.019G027300 [exp] 81 / 2e-19 AT5G49230 123 / 1e-36 HYPERSENSITIVE TO RED AND BLUE, Drought-responsive family protein (.1) Potri.012G086500 [exp] 71 / 1e-14 AT1G56280 92 / 6e-23 drought-induced 19 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0361 [flax] [poplar] C2H2-zf PF05605 [flax] [poplar] zf-Di19 Drought induced 19 protein (Di19), zinc-binding
Representative CDS sequence Show only first row Show all	>Lus10001462 pacid=23161024 polypeptide=Lus10001462 locus=Lus10001462.g ID=Lus10001462.BGIv1.0 annot-version=v1.0 ATGGATGACGATAAGTGGAGCATCGACCTCTCTTCTACTTCCTCTTCTAGGGCTTATCAGCACGATCCTAAGTTTCTATCTGATCTTTGCATTGATTTTG AGTCACTAGAAGACACAGATGAGTATTTGATGGCGGAATATCCTTGCCCCTATTGCGAAGAGGATTTTGATTTGGTTGATTTGTGCTGCCATATTGATGA TGAACATCAGTTCGAATCCAAGTCGGAGATGTGTCCGGTTTGTGGCCTAAATGAGGCTATGGACATGGTTTTCCACATAACATCACAACATGGAGACATG TTTAAGATATCCTTGGCAGTCGGCACCATTTTGAAGTTGAAACGCCGGAAAGGAGATTCACGGTCGTCACTGTCCTTTCTGAAGAAAGATGCAGATGATT ATGATGTATCCCTATATTCTCGGCCGTCTGCTACCATTGTTTCCCACACTGACCCGTTCCTATCATTCATACAAAACATGCCCTCTCTCGACAAAGCAGA AGATGATCAGCCATTTCACTCTGCCCATATAGATGCTGGAAAGGGAAAGCCAGAAGATAAACAATGTGACAGTGTTGCTTCGCCTCCTCGATTATCGGTG AAGGAGCATAGTGAGAAGACTAAGAGGAGTGAGTTTGTACAGGGACTCTTATTGTCCACCATGTTCAGCGATGACTTGTGA
AA sequence Show only first row Show all	>Lus10001462 pacid=23161024 polypeptide=Lus10001462 locus=Lus10001462.g ID=Lus10001462.BGIv1.0 annot-version=v1.0 MDDDKWSIDLSSTSSSRAYQHDPKFLSDLCIDFESLEDTDEYLMAEYPCPYCEEDFDLVDLCCHIDDEHQFESKSEMCPVCGLNEAMDMVFHITSQHGDM FKISLAVGTILKLKRRKGDSRSSLSFLKKDADDYDVSLYSRPSATIVSHTDPFLSFIQNMPSLDKAEDDQPFHSAHIDAGKGKPEDKQCDSVASPPRLSV KEHSEKTKRSEFVQGLLLSTMFSDDL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G05700			Drought-responsive family prot...		Lus10001462 [exp]	0	1
AT4G36280			Histidine kinase-, DNA gyrase ...		Lus10025978 [exp]	4.4	0.8018
					Lus10028086 [exp]	8.0	0.7875
AT5G64680			unknown protein		Lus10011265 [exp]	22.0	0.7695
AT4G36290		CRT1	compromised recognition of TCV...		Lus10014276 [exp]	27.5	0.7643
AT1G65420		NPQ7	NONPHOTOCHEMICAL QUENCHING 7, ...		Lus10027674 [exp]	28.8	0.7578
AT5G09225			unknown protein		Lus10020870 [exp]	32.3	0.7354
AT5G06210			RNA binding (RRM/RBD/RNP motif...		Lus10013306 [exp]	37.1	0.7564
AT5G22620			phosphoglycerate/bisphosphogly...		Lus10009404 [exp]	38.6	0.7594
AT4G31720		STG1, TAFII15, ...	TBP-ASSOCIATED FACTOR 10, SALT...		Lus10005077 [exp]	39.0	0.7588
AT2G34050			unknown protein		Lus10013954 [exp]	39.1	0.7554

Compare expression of checked genes

Lus10001462 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.