Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G41140 445 / 7e-139 Myosin heavy chain-related protein (.1.2) AT1G63300 437 / 3e-135 Myosin heavy chain-related protein (.1) AT5G52280 269 / 8e-76 Myosin heavy chain-related protein (.1) AT1G22060 127 / 4e-29 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008482 [exp] 1320 / 0 AT1G63300 406 / 4e-124 Myosin heavy chain-related protein (.1) Lus10024517 [exp] 749 / 0 AT5G41140 482 / 9e-154 Myosin heavy chain-related protein (.1.2) Lus10008012 [exp] 748 / 0 AT5G41140 473 / 3e-150 Myosin heavy chain-related protein (.1.2) Lus10001482 [exp] 532 / 2e-179 AT1G63300 298 / 5e-92 Myosin heavy chain-related protein (.1) Lus10027462 [exp] 284 / 1e-80 AT1G63300 612 / 0.0 Myosin heavy chain-related protein (.1) Lus10039218 [exp] 279 / 4e-79 AT5G52280 618 / 0.0 Myosin heavy chain-related protein (.1) Lus10038860 [exp] 262 / 4e-73 AT1G63300 614 / 0.0 Myosin heavy chain-related protein (.1) Lus10014980 [exp] 246 / 1e-67 AT1G63300 537 / 9e-179 Myosin heavy chain-related protein (.1) Lus10020915 [exp] 131 / 2e-30 AT1G22060 985 / 0.0 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G124600 [exp] 574 / 0 AT1G63300 810 / 0.0 Myosin heavy chain-related protein (.1) Potri.001G106700 [exp] 338 / 3e-99 AT1G63300 603 / 0.0 Myosin heavy chain-related protein (.1) Potri.015G143800 [exp] 309 / 2e-89 AT5G52280 594 / 0.0 Myosin heavy chain-related protein (.1) Potri.012G141200 [exp] 207 / 2e-54 AT5G52280 322 / 7e-95 Myosin heavy chain-related protein (.1) Potri.002G091700 [exp] 139 / 6e-33 AT1G22060 1546 / 0.0 unknown protein Potri.005G170066 [exp] 138 / 1e-32 AT1G22060 1031 / 0.0 unknown protein Potri.006G120400 [exp] 84 / 4e-16 AT1G22060 121 / 2e-27 unknown protein Potri.008G029800 [exp] 80 / 8e-15 AT1G22060 117 / 5e-26 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001481 pacid=23157125 polypeptide=Lus10001481 locus=Lus10001481.g ID=Lus10001481.BGIv1.0 annot-version=v1.0 ATGTTCAGGCCGGTGAGGTGGCGGAGTCATGATAAGAACAAGATCAAAGTCGTCTTCAAATTTCAGTTCCATGCAACTCAGGTTACACAGGTGAATGTGG AATCTTTAATTGTCAGTGTGGTTCCTGGAGAAGTTGGGAAGCCAACTGGTGGAAGATCAGAGAAGGCTACAATCAGAGATGGAAACTGCAAGTGGGAATA TCCAGTCTATGAAACAGTTAAATTCAACCAAGATTCCAAGACTGGGAAGATCAGTGAGAGGACTTATCACTTCATTCTCTCAACTGGATCAGCCAAGGGT AGTAGTGTAGTTGGGGAAGCTTCGATCGACTTAGCAGCTTATGCCGAGACAGCGAAAGCTTCGAATGTGTCTCTTCCCTTGAAGAACTCAAAGACTAATG GAGTGTTACATGTTTCGATTCAGAAGTTGCAGGCAAGTGTAGCTGTAGATCAGAGGGAAGAGGAGGAAAATGAAGCTACAAACATAAAGCCGAGAAATAC GACGTTGAATACTCTCTTCACCAACGACGAGAATGGAGAAGGCATCAAGAGTTTTACTAATGGGGATGTGTTGAGTGCTACAAACAATAATGCTGAACCG AATGGAGTAGTCTCTACCGCAATAAGTGGATCTGATGTTACATTGACAAGCTCCGGGAGCAGCTCAGGGCTTAATACACCACGAGATAGCCAACTCACGA GCAATGGCACCTTACAGGATCATGCTAGCACGCTAGCATCGAAAACTGTAGCGTTGGCCCCTGGAGGACATCAACAACAACCACAATACGAATGGTCAGT AGATTCTGATCACGGCTTGAGCATCGATGGCTCGACGAACAGTTCCAATACGGGAGAAAGGTCTCAACAAAGTTCGTCGGATGTCGAGGTTGAGAAGCTC AAGGCGGAACTTGTCACGATGGCAAGGCAGCTAGATCTTTCGGACCTTGAATTGCAGACACTTCGCAAGCAAGTCGTGAAGGAAAGCAAGAGGGGCCACG ATCTGTCTCGAGAGCTCAAGCAAATCCACGCGGAATGCGAGCAACTTAGGGGGATGCAGAAAGGAATGGAGGAAGCAAAAGTGGAAAAAAACAAGTTACG AAAATCGGATCAAGGGGTTGGTGGGGATCCATGGCTTCTTATTGGAGAGATCAGACAAGAACTCTATTACGAGAAGGACCGAAATGCCAACCTCCAATTG CAGCTACAGAAGACTCAAGAATCCAATGCAGAGCTGTTACTTGCTCTCAAGGAGCTGGATGAAATGTTGGCGCAAAAGGGTACTACTACCGAGACCACCA ATGCATCGAAAAGTGGGAGCTCGGACGATGAGGAGCAGCAAGCGTTGGAAGAAATCGTGAAACAGCACAGCGATTCGAAGGAGACGTACATGCTGGAGCA AAGGATTATCGATCTAGGTAGCGAGATCGAGATCTACAGGAGGGAAAAGGACGAGCTGGAGATGCAAATGGAGCAGCTTGCTCTTGACTACGAGATACTT AAGCAGGAGAATCATGACATTTCATATAGGCTCGAGCAGAGCCAGCTGCAAGAGCAACTCAATATGCAGTATGAATGCTCATCACCACCGACTGCGAATG GGAGGAACTCGTTGGAGAGCGAGATTGAAAGGCTGGAAGACGAACTGAAGGAGCAAGGGGTAGAGTATTCTATCTCCTTGGACACTATAAAAGAGCTTCA GAACCATATCAAGATCGTCGAGGGAGAGCTGGATTCAGAACGAGAAAGAATGTCGCGGCATCCTGCCATTGTCGAGGAACTAGAAGGCCGAATCGAGAGT TTGGAGAATGAACTGAGCAAGCAACGGAAGGCATATTCCGGTTCTGTTGTGACCATTAATGAACTTCGAAACAATATCAAGAGCTTGGAGGGAGAAATAA AGCTGCAAGAACAAAGTGCATTACAACATGAAGCATCAGCTGCTGCCAACACAAAGGAACTCAAATCCGAAATCGTGAGGCTGGAGAATGAAGTCAACGA GCAACGAAATGAATACAACGGTTCTTTGGCCATCATAAGTGGACTTCAAAACCATATCAAGACCTTAGAGGAAGAAATGAAGATGCAAGAAGAAAGTATA TTGGATCATGAAGCATCCGCTGCTGCTGGCACAAAGGAACTCAAATCCGAAATCGAGAGGTTAGAGAATGAAAAGATTGGATCTTTGGCCACCATAAGTG AACTTCAAAACCATATCAAGAGCTTAGAGGGAAAAATAAAGACAGAAGAAGAAAATATAAAGCAGCATGAAGCATCAGCTGCTGCCAACACGAAGGAACT TGAATCCGAAATCGAGAGGTTGGAGAAGGAAATCGAGGAGCAAGGAAATGAAAAGATTGGATCTTTGGCCACCATAAGTGAACTTCAAATCCATATCAAG AGCTTAGAGGAAGAGTTGAAGCTGCAAGAACAAAGTACAAAGAGGCTGCAGAACGAATTTAAGAAGCAACAGAAGCAAAATTCTACTTCGCTCGCTACCA TCAAGGAACTGGAAACTCATATAAGTAGCATGGAGGATGAATTGGAGCGTCAATCCCAAGCATTCGAATCTGATCTTGAGACGATCACACGAGAAAGAGT CGAGCAGGAGCAAAGAGCCATCCGGGCAGAGGAAGCCTTGAAGTTGACCAGATGGAAAAATTCCAACACGGCCGAGAAGCTACAGGAGGAGTTCAAAAGG TTGTCTAAGCAGATGGCATCTACATTCGAAGCGAACGAGAACGTAGCGATGAAGGCAATCGCAGAAGCTAACGAAGTCAGGATTCAGAAAATTCAACTTG AAGACATGCTTAGGAGAGCCAAGTCAGAACTCCAGTCTGTTAAGGATGACTATGACAAAAAATTGCTAGAGCTCACCAACCAGTTGGACTTGAAATCTCG TCAAGTTGAGGAAGTTCTAGGTGGAACTTCCAATCAGAAGGTTCAGAAGCTGCAAGCTGAAATCGAAAAGCTTGCGAAAGAAAATAACCTGTTCTCCATA CAAGTAGAGGAAATGAAGGCCTCCATCAAGAGCCATGAAGAACTGGAGAATAGTATTGCTATACTGAAGAAAGAAGCAGAGAAATCGGCAGAGGGTCTAC GCAAGACAAGATCAATCAAGGATGCAGAAGTGGAGAGACTACAATGTCAATGTGACGACTTGAAACAATCTCTCATTGAAGACGAGACTGAGAAGGAAAA ACTCAGAATGCAGTTGGTCTGCTTAAAGGGTGACCTCAAGAAAAAGGATGAAGCTTTGATCAGTGCCGAAAAGAAGGTCAAGGAAAGCAACAGACGTGCA CTAATCGCTCCGAGAAACAACAAGTCTGCTGCTGCTCTAGTTTCTAATGGTACCAAAGAGGTCTCAAATCTCAAGGAGAAAATTAAACTGCTTGAGGTAC ATTGGAGATTGAACCTCATTTTGATCATTCTACAGAATTTGGGAAATTATTTGACTTAG
AA sequence Show only first row Show all	>Lus10001481 pacid=23157125 polypeptide=Lus10001481 locus=Lus10001481.g ID=Lus10001481.BGIv1.0 annot-version=v1.0 MFRPVRWRSHDKNKIKVVFKFQFHATQVTQVNVESLIVSVVPGEVGKPTGGRSEKATIRDGNCKWEYPVYETVKFNQDSKTGKISERTYHFILSTGSAKG SSVVGEASIDLAAYAETAKASNVSLPLKNSKTNGVLHVSIQKLQASVAVDQREEEENEATNIKPRNTTLNTLFTNDENGEGIKSFTNGDVLSATNNNAEP NGVVSTAISGSDVTLTSSGSSSGLNTPRDSQLTSNGTLQDHASTLASKTVALAPGGHQQQPQYEWSVDSDHGLSIDGSTNSSNTGERSQQSSSDVEVEKL KAELVTMARQLDLSDLELQTLRKQVVKESKRGHDLSRELKQIHAECEQLRGMQKGMEEAKVEKNKLRKSDQGVGGDPWLLIGEIRQELYYEKDRNANLQL QLQKTQESNAELLLALKELDEMLAQKGTTTETTNASKSGSSDDEEQQALEEIVKQHSDSKETYMLEQRIIDLGSEIEIYRREKDELEMQMEQLALDYEIL KQENHDISYRLEQSQLQEQLNMQYECSSPPTANGRNSLESEIERLEDELKEQGVEYSISLDTIKELQNHIKIVEGELDSERERMSRHPAIVEELEGRIES LENELSKQRKAYSGSVVTINELRNNIKSLEGEIKLQEQSALQHEASAAANTKELKSEIVRLENEVNEQRNEYNGSLAIISGLQNHIKTLEEEMKMQEESI LDHEASAAAGTKELKSEIERLENEKIGSLATISELQNHIKSLEGKIKTEEENIKQHEASAAANTKELESEIERLEKEIEEQGNEKIGSLATISELQIHIK SLEEELKLQEQSTKRLQNEFKKQQKQNSTSLATIKELETHISSMEDELERQSQAFESDLETITRERVEQEQRAIRAEEALKLTRWKNSNTAEKLQEEFKR LSKQMASTFEANENVAMKAIAEANEVRIQKIQLEDMLRRAKSELQSVKDDYDKKLLELTNQLDLKSRQVEEVLGGTSNQKVQKLQAEIEKLAKENNLFSI QVEEMKASIKSHEELENSIAILKKEAEKSAEGLRKTRSIKDAEVERLQCQCDDLKQSLIEDETEKEKLRMQLVCLKGDLKKKDEALISAEKKVKESNRRA LIAPRNNKSAAALVSNGTKEVSNLKEKIKLLEVHWRLNLILIILQNLGNYLT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G41140			Myosin heavy chain-related pro...		Lus10001481 [exp]	0	1
AT1G63300			Myosin heavy chain-related pro...		Lus10008482 [exp]	2.4	0.9587
AT5G54670		KATC, ATK3	KINESIN-LIKE PROTEIN IN ARABID...		Lus10036621 [exp]	4.0	0.9506
AT2G23360			Plant protein of unknown funct...		Lus10004994 [exp]	4.9	0.9514
AT4G14760			kinase interacting (KIP1-like)...		Lus10021908 [exp]	6.5	0.9527
AT4G38050			Xanthine/uracil permease famil...		Lus10025716 [exp]	6.7	0.9212
AT1G29170		ATSCAR3, WAVE2	WASP \(WISKOTT-ALDRICH SYNDROM...		Lus10001897 [exp]	6.9	0.9224
AT4G30080	ARF	ARF16	auxin response factor 16 (.1)		Lus10016091 [exp]	7.7	0.9269
AT5G22860			Serine carboxypeptidase S28 fa...		Lus10008358 [exp]	8.0	0.9200
AT5G42710			unknown protein		Lus10010806 [exp]	8.5	0.9308
AT3G01810			unknown protein		Lus10015805 [exp]	8.5	0.9296

Compare expression of checked genes

Lus10001481 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.