Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G64690 70 / 5e-14 BLT BRANCHLESS TRICHOMES, branchless trichome (.1) AT3G20350 49 / 8e-07 unknown protein AT3G11590 49 / 1e-06 unknown protein AT1G50660 47 / 6e-06 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017339 [exp] 306 / 8e-107 AT1G64690 105 / 2e-27 BRANCHLESS TRICHOMES, branchless trichome (.1) Lus10005316 [exp] 104 / 5e-29 AT1G64690 45 / 8e-07 BRANCHLESS TRICHOMES, branchless trichome (.1) Lus10043111 [exp] 57 / 2e-09 AT1G50660 616 / 0.0 unknown protein Lus10032637 [exp] 52 / 9e-08 AT1G50660 625 / 0.0 unknown protein Lus10021521 [exp] 47 / 7e-06 AT1G50660 750 / 0.0 unknown protein Lus10040076 [exp] 47 / 9e-06 AT1G50660 756 / 0.0 unknown protein Lus10013311 [exp] 42 / 0.0004 AT3G11590 332 / 1e-105 unknown protein Lus10013312 [exp] 41 / 0.0004 AT3G11590 285 / 1e-88 unknown protein Lus10005200 [exp] 41 / 0.0005 AT3G11590 322 / 1e-101 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G082600 [exp] 161 / 5e-48 AT1G64690 79 / 1e-16 BRANCHLESS TRICHOMES, branchless trichome (.1) Potri.003G147900 [exp] 156 / 4e-47 AT1G64690 66 / 2e-12 BRANCHLESS TRICHOMES, branchless trichome (.1) Potri.006G207800 [exp] 50 / 4e-07 AT3G11590 582 / 0.0 unknown protein Potri.011G090100 [exp] 49 / 9e-07 AT1G50660 689 / 0.0 unknown protein Potri.011G003200 [exp] 48 / 3e-06 AT1G50660 350 / 1e-110 unknown protein Potri.016G074300 [exp] 48 / 3e-06 AT3G11590 560 / 0.0 unknown protein Potri.004G199500 [exp] 47 / 5e-06 AT3G11590 399 / 6e-131 unknown protein Potri.009G160900 [exp] 45 / 2e-05 AT3G11590 399 / 9e-132 unknown protein Potri.004G015800 [exp] 43 / 8e-05 AT1G50660 390 / 1e-126 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001665 pacid=23154060 polypeptide=Lus10001665 locus=Lus10001665.g ID=Lus10001665.BGIv1.0 annot-version=v1.0 ATGGAAGAGAATCGGATCAAGGAATTGAAGGCCGAGCTGGACCACGAGCGGAGATCGAGGAAGAAGGTGGAGACTCTGAACAAGAAGCTTGCCAGAGAGC TGGCGGAGGAGAGGAGAGGGAAGGAGGCGCTGGTGAAAGTCTGCGAGAATCTCGCCAGAAAAATCGCGGCGGATAAAGCTGAGATTGATTCGATGGAGAA GGAGATGGAAGAGGAGAGGGAGATGCTGAGGATGGCGGAAGTGTTAAGAGAAGAGAGAGTCCAGATGAAGCTCTCCGATGCGAGGATGCTCTGGGAAGAG AAGATGTCGTCAGAGGAAGGGACGAAATTGGGGGAATCTGATACGGCGGCGATTGAGCGGAATTGGGGATTCGGGTTGGCGGCGGAGGAGACGGCCGATT TGTTGCCGGGGAAGTTTAGGAAACTAAACATCGTCGACGTCGGCGGCGGCGGAGGAGGCGGAGGAATTGGGTTAGTTGAGAATCATCATATAAGGCGGGG GATCAGAGGGTTTGTTGAGTTTCCGAGAGTGGTTCATCGGAGCAACGGTGGATCGAAGAGCGGCGGGAAGCATTATTGGGGGACGAAGCTGGAGTGTCAG AAGGCTCAGCTGAGGATTCTGCTGAAACAGAGGAGTCCGATCCGATCGAATACTTTAATTATTAGTTGA
AA sequence Show only first row Show all	>Lus10001665 pacid=23154060 polypeptide=Lus10001665 locus=Lus10001665.g ID=Lus10001665.BGIv1.0 annot-version=v1.0 MEENRIKELKAELDHERRSRKKVETLNKKLARELAEERRGKEALVKVCENLARKIAADKAEIDSMEKEMEEEREMLRMAEVLREERVQMKLSDARMLWEE KMSSEEGTKLGESDTAAIERNWGFGLAAEETADLLPGKFRKLNIVDVGGGGGGGGIGLVENHHIRRGIRGFVEFPRVVHRSNGGSKSGGKHYWGTKLECQ KAQLRILLKQRSPIRSNTLIIS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G64690		BLT	BRANCHLESS TRICHOMES, branchle...		Lus10001665 [exp]	0	1
AT3G26935			DHHC-type zinc finger family p...		Lus10032009 [exp]	1.4	0.8747
AT1G12990			beta-1,4-N-acetylglucosaminylt...		Lus10006475 [exp]	2.4	0.8303
AT1G52140			unknown protein		Lus10034944 [exp]	2.8	0.7974
AT1G29530			unknown protein		Lus10011974 [exp]	3.0	0.8290
AT1G12990			beta-1,4-N-acetylglucosaminylt...		Lus10006474 [exp]	12.0	0.8063
AT2G43630			unknown protein		Lus10005311 [exp]	12.2	0.8153
AT1G30700			FAD-binding Berberine family p...		Lus10038439 [exp]	12.4	0.7855
AT5G60890	MYB	AtMYB34, MYB34,...	ALTERED TRYPTOPHAN REGULATION ...		Lus10015713 [exp]	12.6	0.7590
AT5G05830			RING/FYVE/PHD zinc finger supe...		Lus10027744 [exp]	13.5	0.7799
AT1G65295			unknown protein		Lus10026997 [exp]	16.2	0.7656

Compare expression of checked genes

Lus10001665 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.