Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001746 pacid=23170802 polypeptide=Lus10001746 locus=Lus10001746.g ID=Lus10001746.BGIv1.0 annot-version=v1.0 ATGCAACTCAAAAAGTATATACAAAAGCAGCTAACTACAACGGTCAAAAGGCAACACACATCCAAGAGTAAAAACAGGACAAGTGCTATATTTTCAACTC TCCACAACAAACGGATAAATTTGCAATCGTCCGTCACCAGCCAGCAAGTGCACCACTGTGTACTCGACCTTAGTCGTCGTATCTGTCTCTCCCTCGCCGA TCTCCTGGCTCAAAGTCGTCGCCCTGAATCGGAGAAAGTCGTCGACTCGTCGTTCCCGTCTTCCCGAATCGAAGGCTGCTGTCCGTCCCTCTCCCCTGCA TCTCCTCCGGCTCCAAGTCGTCCACTCGCCGTTCGCGAATCGAAGGCTGTTGTCCGCCCCTCTCCCCTGCTTGGTCGTAGAAGTGTTGGCCCTTGGGTGA TTGGATTTGGAAGGTAA
AA sequence Show only first row Show all	>Lus10001746 pacid=23170802 polypeptide=Lus10001746 locus=Lus10001746.g ID=Lus10001746.BGIv1.0 annot-version=v1.0 MQLKKYIQKQLTTTVKRQHTSKSKNRTSAIFSTLHNKRINLQSSVTSQQVHHCVLDLSRRICLSLADLLAQSRRPESEKVVDSSFPSSRIEGCCPSLSPA SPPAPSRPLAVRESKAVVRPSPLLGRRSVGPWVIGFGR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10001746 [exp]	0	1
AT4G21970			Protein of unknown function, D...		Lus10040067 [exp]	7.3	0.7490
					Lus10017380 [exp]	8.2	0.7062
AT5G24860		ATFPF1, FPF1	ARABIDOPSIS FLOWERING PROMOTIN...		Lus10000506 [exp]	18.4	0.7448
AT5G25090		AtENODL13	early nodulin-like protein 13 ...		Lus10003432 [exp]	22.7	0.7011
					Lus10035412 [exp]	27.2	0.7309
					Lus10012543 [exp]	28.1	0.6691
AT1G25270			nodulin MtN21 /EamA-like trans...		Lus10020819 [exp]	33.8	0.6688
AT4G39010		ATGH9B18	glycosyl hydrolase 9B18 (.1)		Lus10018077 [exp]	37.1	0.6445
AT5G59700			Protein kinase superfamily pro...		Lus10020474 [exp]	37.4	0.6728
AT2G46760			D-arabinono-1,4-lactone oxidas...		Lus10030206 [exp]	40.7	0.5764

Compare expression of checked genes

Lus10001746 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.