Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G05320 566 / 0 beta-1,2-N-acetylglucosaminyltransferase II (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001174 [exp] 697 / 0 AT2G05320 590 / 0.0 beta-1,2-N-acetylglucosaminyltransferase II (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G167200 [exp] 600 / 0 AT2G05320 547 / 0.0 beta-1,2-N-acetylglucosaminyltransferase II (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0110 [flax] [poplar] GT-A PF05060 [flax] [poplar] MGAT2 N-acetylglucosaminyltransferase II (MGAT2)
Representative CDS sequence Show only first row Show all	>Lus10001748 pacid=23170781 polypeptide=Lus10001748 locus=Lus10001748.g ID=Lus10001748.BGIv1.0 annot-version=v1.0 ATGGCTATTTACGGGAAGAAATCCCGTCTTAAAGTAGGACCTTTACGCCGATTTTTCGCGCCTCTGATTTTGGTAACGGCAGTAGGGATTCTGTTACTTA TTGTTCTGCTTGGTACGAATTCAGTCTCCAGTTTCGTCTCCAGTAATCGGAATGAATCTTATGACCAGTTGGAAGCACCTCGCAACAATTCTGCAGTAGA TCAGAAACTCAAGCTGCCTAAGCAGAGCAAGTTGTCCATCCTATTGGAAAAGCTTAACCAGTTACCTCCAAGGAACGTGGATCTGTATCCTAAGTTAGCT CAGGATCATGTAGCTATAGTCTTGTATGTTCATAACAGGCCTCAGTATCTGAAAGTCGTGGTCGATAGCTTGTCGAAGGTGGTTGGGATAAACGAGACAT TGCTCATTGTCAGCCATGATGGCTACTTTAAGGAGATGAACAAGATTGTGGCAAGTATCAAGTTTTGTAGGGTGAAACAGATATTTGCACCTTATTCGCC TCATGTTTTCGACTCGAGCTTCCCTGGTGTTTCTCCCAATGACTGTAGGGAGACGGAGAATGCTGCTAAGAAGCATTGTGTAGGGAATCCGGATCAGTAT GGGAATCACAGGTCACCGAAGATTGTTTCATTGAAGCATCATTGGTGGTGGATGATGAATACGGTGTGGGATGGACTGGAGGAGACGAAGAGGCACCATG GCCATATTCTCTTCATCGAGGAGGATCACTTCATTTTCCCTAATGCATACCGCAACTTGAAAGTGCTCACAGATTTGAAGCCTGTAAAGTGCCCTGATTG CTTTGCCGCAAACTTAGCACCTTCTGATGTCAACTCCAGAGGAGAGAATTTGGACAGTTTACTTGCTGAGCGGATGGGAAATGTTGGTTACTCATTCAAC CGAACTGTCTGGAAATTGATTCATCTCAAAGCAAGAGAGTTCTGTTTCTTTGATGACTACAACTGGGATATAACAATGTGGGCAACGGTTTACCCTTCCT TCGGACGTCCTGTCTACTCCTTACGAGGGCCAAGGACGAGTGCTGTTCATTTTGGTAAGTGTGGTTTGCATCAGGGAAACGGGGAGAAAACTGCTTGCAT AGACAATGGCGCGGTGAATATCGGGGTAAGCAAAGCTGATATGGCAGTCAACATAAATAAGGAGTGGGAAGTGCGTGTATACGAGAATCAGCCAGGGTAT AAGGCTGGATTCAAAGGTTGGGGAGGCTGGGGGGACGAGAGAGATCGTGAATTGTGCATGAAATTCGCAGAAATGCATCGCATCAGCAGCACCTCGATTT GA
AA sequence Show only first row Show all	>Lus10001748 pacid=23170781 polypeptide=Lus10001748 locus=Lus10001748.g ID=Lus10001748.BGIv1.0 annot-version=v1.0 MAIYGKKSRLKVGPLRRFFAPLILVTAVGILLLIVLLGTNSVSSFVSSNRNESYDQLEAPRNNSAVDQKLKLPKQSKLSILLEKLNQLPPRNVDLYPKLA QDHVAIVLYVHNRPQYLKVVVDSLSKVVGINETLLIVSHDGYFKEMNKIVASIKFCRVKQIFAPYSPHVFDSSFPGVSPNDCRETENAAKKHCVGNPDQY GNHRSPKIVSLKHHWWWMMNTVWDGLEETKRHHGHILFIEEDHFIFPNAYRNLKVLTDLKPVKCPDCFAANLAPSDVNSRGENLDSLLAERMGNVGYSFN RTVWKLIHLKAREFCFFDDYNWDITMWATVYPSFGRPVYSLRGPRTSAVHFGKCGLHQGNGEKTACIDNGAVNIGVSKADMAVNINKEWEVRVYENQPGY KAGFKGWGGWGDERDRELCMKFAEMHRISSTSI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G05320			beta-1,2-N-acetylglucosaminylt...		Lus10001748 [exp]	0	1
AT2G05320			beta-1,2-N-acetylglucosaminylt...		Lus10001174 [exp]	3.3	0.8315
AT4G25670			unknown protein		Lus10038842 [exp]	5.7	0.8205
AT3G58840		PMD1	peroxisomal and mitochondrial ...		Lus10010937 [exp]	8.7	0.8174
AT2G17570			Undecaprenyl pyrophosphate syn...		Lus10032757 [exp]	11.0	0.8251
AT3G59520		ATRBL13	RHOMBOID-like protein 13 (.1)		Lus10008156 [exp]	11.2	0.7811
AT1G09330		ECHIDNA, ECH	unknown protein		Lus10004514 [exp]	12.4	0.8100
AT1G11440			unknown protein		Lus10018397 [exp]	13.9	0.7596
AT5G48380		BIR1	BAK1-interacting receptor-like...		Lus10008743 [exp]	15.0	0.7964
AT1G04760		ATVAMP726	vesicle-associated membrane pr...		Lus10018296 [exp]	15.2	0.7942
AT4G32530			ATPase, F0/V0 complex, subunit...		Lus10000694 [exp]	15.5	0.8064

Compare expression of checked genes

Lus10001748 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.