Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22400 121 / 5e-32 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G78270 118 / 6e-31 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT1G22340 115 / 8e-30 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22380 112 / 7e-29 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22370 111 / 2e-28 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22360 107 / 4e-27 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT3G02100 65 / 3e-12 UDP-Glycosyltransferase superfamily protein (.1) AT3G11340 57 / 2e-09 UGT76B1 UDP-dependent glycosyltransferase 76B1, UDP-Glycosyltransferase superfamily protein (.1) AT5G05860 56 / 6e-09 UGT76C2 UDP-glucosyl transferase 76C2 (.1) AT3G46660 55 / 1e-08 UGT76E12 UDP-glucosyl transferase 76E12 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013922 [exp] 180 / 5e-54 AT1G22400 533 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013923 [exp] 173 / 3e-51 AT1G22400 537 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013924 [exp] 137 / 6e-38 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013920 [exp] 133 / 2e-36 AT1G22400 488 / 3e-170 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10039277 [exp] 130 / 3e-35 AT1G22400 499 / 3e-174 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10000993 [exp] 122 / 2e-32 AT1G22380 563 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013925 [exp] 119 / 3e-31 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024584 [exp] 118 / 7e-31 AT1G22400 570 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10031388 [exp] 118 / 7e-31 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G052300 [exp] 120 / 8e-32 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G312600 [exp] 120 / 9e-32 AT1G22360 586 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 120 / 2e-31 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098300 [exp] 119 / 4e-31 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098400 [exp] 118 / 6e-31 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 114 / 2e-29 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 103 / 2e-25 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 102 / 5e-25 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 101 / 6e-25 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052100 [exp] 101 / 1e-24 AT1G22360 612 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10001880 pacid=23179017 polypeptide=Lus10001880 locus=Lus10001880.g ID=Lus10001880.BGIv1.0 annot-version=v1.0 ATGACTTCAACTGTCGCCGCCGTCGAGAAATCACCGCCGCACGTCATCTGCGTCCCATACCCGACGCAAGGCCACATAAACCCGATGCTCCACGTGGCAA AACTTCTCCATTCCCGCGGTTTCCATGTCACCTTCGTTAACACGGACTACAACCACAAGCGCCTGCTCAAGTCTTGGGGCACCGGTGGCACCGGCCGCTC CTCCTCCCCTTCGAGGGACTTGGTGCACAGGCTAAACGACGGGGACAGTGTCGGTTCGCCACGTGTCAGTTGTATTGTGTCCGACGCGGCCATGGCATTC ACGTTGGATGTGGCTAGAGAGCTCGGGATTCCTGACGCGCTCTTCCTAGCTCTGAGCGCGTGTGCCAACTTGGCCTTGCTCAGCTACCCTGTCCTCGTCG ACAGAGGCTTGGTGCCTCTTAAAAGTGCGATGAATTGCTCCTATGCTTGTAGAGAATGGGGGATTGAGATGGACATTGGTTCGGAAGTGAAGAGGGGGGA AGTTGAGAAACTTGTGAGGGAGGTGATGGGTGGGGAGAAAGGAAAGGAGATGAAGTGGAAAGCTATGGAATGGAAAGTTAAGGCGGAAGAAGTTATTCAA CCTGATAGATTTTCGTTTCAAAATCTGAACAAACTGATCGAAATATTGATGAAGAACACAACTGATTGA
AA sequence Show only first row Show all	>Lus10001880 pacid=23179017 polypeptide=Lus10001880 locus=Lus10001880.g ID=Lus10001880.BGIv1.0 annot-version=v1.0 MTSTVAAVEKSPPHVICVPYPTQGHINPMLHVAKLLHSRGFHVTFVNTDYNHKRLLKSWGTGGTGRSSSPSRDLVHRLNDGDSVGSPRVSCIVSDAAMAF TLDVARELGIPDALFLALSACANLALLSYPVLVDRGLVPLKSAMNCSYACREWGIEMDIGSEVKRGEVEKLVREVMGGEKGKEMKWKAMEWKVKAEEVIQ PDRFSFQNLNKLIEILMKNTTD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22400		ATUGT85A1, UGT8...	ARABIDOPSIS THALIANA UDP-GLUCO...		Lus10001880 [exp]	0	1

Compare expression of checked genes

Lus10001880 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.