Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G46225 360 / 2e-125 ABIL1, ABI1L1 ABI-1-like 1 (.1.2.3) AT5G24310 145 / 2e-42 ABIL3 ABL interactor-like protein 3 (.1.2) AT3G49290 146 / 8e-42 ABIL2 ABL interactor-like protein 2 (.1.2) AT5G42030 122 / 5e-33 ABIL4 ABL interactor-like protein 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008737 [exp] 563 / 0 AT2G46225 377 / 5e-132 ABI-1-like 1 (.1.2.3) Lus10005919 [exp] 152 / 1e-43 AT5G24310 400 / 2e-140 ABL interactor-like protein 3 (.1.2) Lus10022393 [exp] 114 / 1e-29 AT5G24310 360 / 2e-125 ABL interactor-like protein 3 (.1.2) Lus10032421 [exp] 104 / 8e-26 AT3G49290 171 / 2e-51 ABL interactor-like protein 2 (.1.2) Lus10043223 [exp] 95 / 1e-21 AT2G32230 433 / 2e-142 proteinaceous RNase P 1 (.1) Lus10023052 [exp] 89 / 3e-21 AT5G24310 101 / 7e-27 ABL interactor-like protein 3 (.1.2) Lus10023654 [exp] 87 / 2e-19 AT5G42030 91 / 3e-21 ABL interactor-like protein 4 (.1) Lus10011102 [exp] 84 / 9e-18 AT4G29010 1043 / 0.0 ABNORMAL INFLORESCENCE MERISTEM, Enoyl-CoA hydratase/isomerase family (.1) Lus10034928 [exp] 74 / 6e-16 AT5G42030 87 / 4e-21 ABL interactor-like protein 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G165900 [exp] 420 / 6e-149 AT2G46225 397 / 5e-140 ABI-1-like 1 (.1.2.3) Potri.014G092300 [exp] 416 / 1e-147 AT2G46225 396 / 1e-139 ABI-1-like 1 (.1.2.3) Potri.012G016900 [exp] 154 / 1e-44 AT3G49290 353 / 5e-122 ABL interactor-like protein 2 (.1.2) Potri.001G088100 [exp] 142 / 4e-40 AT3G49290 265 / 9e-88 ABL interactor-like protein 2 (.1.2) Potri.003G142800 [exp] 139 / 8e-39 AT3G49290 292 / 3e-98 ABL interactor-like protein 2 (.1.2) Potri.018G082600 [exp] 93 / 5e-22 AT2G46225 94 / 1e-22 ABI-1-like 1 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10002151 pacid=23181287 polypeptide=Lus10002151 locus=Lus10002151.g ID=Lus10002151.BGIv1.0 annot-version=v1.0 ATGGAGTTGGAGCGAACCAGGTCCCAAAATCCCGCCATGACCTTCGACGAGGTCTCCATGGAGCGCAGCAAAAGCTTCGTTAAAGCTTTGCAGGAACTCA AGAACTTGAGGCCTCAGCTTTATTCAGCTGCAGATTACTGTGAGAAGTCTTATCTCAATAGTGAACAAAAGCAGATGGTTCTTGACAACCTGAAAGATTA TGCTGTGAGGGCACTAGTCAATGCTGTTGACCATCTTGGCACGGTTGCTTACAAGTTAACAGATTTGCTTGATCAACAAACATCAGATGTCTCCACCATT GGAGTCAAAGTTTCTTCCATAAGTCAGCAACTTCTTACATGCCAAACCTTTATAGAGAAAGGAGGTCTCAGGCAGCAGCAGTTGTTGGCCACGATTCCTC GACACCACAAGCATTATGTCTTACCAAATTCGGTTAGTAAGAAGGTACATTTTAGCCCTCAAGTACAGACTGATGCAAGGCAAAACCATATTCATGCTAG ATCCCGCCTTCAACCTTCCGAATCTCCAGCTTCAAAAACACTCTCTTGGCACATTTCCACGGAGACAAAACCGACAATTAAAGGGTCTCTAACTACTTTG GAAAGCAGAGAAGACTCGAAATCTTCGGGAATATCTTCCGAGTCATTTCAACTCTTAGATAAAAACGACGGTACGCTGTTAAGGCCCTCCGGAACATCAG CGTATCCATCGAGCACTGTCGTGCAACCTTTTGGTGCACAACGCAAGGAAGGGTCGGAAGGTTCTAAAAACTTGGGAGGGTTCAGGTCGTTCGACAACCC AAGACGCGACATTGTTCGTGCCGCTGTCCCAGTTCGCAGCAAGAGCGTTCTCTCGGCTTTCTTCGCGAAACAAAAGACACCGAAGCTAACCGCTTCTTGA
AA sequence Show only first row Show all	>Lus10002151 pacid=23181287 polypeptide=Lus10002151 locus=Lus10002151.g ID=Lus10002151.BGIv1.0 annot-version=v1.0 MELERTRSQNPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAADYCEKSYLNSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTSDVSTI GVKVSSISQQLLTCQTFIEKGGLRQQQLLATIPRHHKHYVLPNSVSKKVHFSPQVQTDARQNHIHARSRLQPSESPASKTLSWHISTETKPTIKGSLTTL ESREDSKSSGISSESFQLLDKNDGTLLRPSGTSAYPSSTVVQPFGAQRKEGSEGSKNLGGFRSFDNPRRDIVRAAVPVRSKSVLSAFFAKQKTPKLTAS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G46225		ABIL1, ABI1L1	ABI-1-like 1 (.1.2.3)		Lus10002151 [exp]	0	1
AT2G46225		ABIL1, ABI1L1	ABI-1-like 1 (.1.2.3)		Lus10008737 [exp]	1.7	0.9252
AT3G27960			Tetratricopeptide repeat (TPR)...		Lus10022231 [exp]	12.4	0.9216
AT5G50090			unknown protein		Lus10043461 [exp]	16.6	0.8847
AT3G23090			TPX2 (targeting protein for Xk...		Lus10021223 [exp]	17.5	0.8632
AT2G20650			RING/U-box superfamily protein...		Lus10039848 [exp]	18.6	0.9099
AT5G46340		RWA1	REDUCED WALL ACETYLATION 1, O-...		Lus10015265 [exp]	19.3	0.9147
AT1G27500			Tetratricopeptide repeat (TPR)...		Lus10042120 [exp]	20.2	0.8914
AT1G68260			Thioesterase superfamily prote...		Lus10031959 [exp]	21.6	0.8970
AT5G60720			Protein of unknown function, D...		Lus10016114 [exp]	22.5	0.9116
AT2G40320		TBL33	TRICHOME BIREFRINGENCE-LIKE 33...		Lus10007528 [exp]	23.9	0.9000

Compare expression of checked genes

Lus10002151 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.