Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42770 279 / 1e-95 Maf-like protein (.1.2) AT5G66550 237 / 2e-79 Maf-like protein (.1) AT2G25500 89 / 7e-23 Inosine triphosphate pyrophosphatase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040470 [exp] 220 / 1e-72 AT5G66550 268 / 3e-92 Maf-like protein (.1) Lus10040204 [exp] 122 / 2e-35 AT5G66550 154 / 2e-48 Maf-like protein (.1) Lus10036572 [exp] 52 / 8e-09 AT5G66550 72 / 9e-17 Maf-like protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G196400 [exp] 313 / 6e-109 AT5G42770 309 / 2e-107 Maf-like protein (.1.2) Potri.007G025000 [exp] 234 / 3e-78 AT5G66550 278 / 1e-95 Maf-like protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0269 [flax] [poplar] Maf PF02545 [flax] [poplar] Maf Maf-like protein
Representative CDS sequence Show only first row Show all	>Lus10002531 pacid=23157297 polypeptide=Lus10002531 locus=Lus10002531.g ID=Lus10002531.BGIv1.0 annot-version=v1.0 ATGGAAGCAAATAAAACTCCTACTGTCAAAGTGATATTGGGATCGGCGTCGATTGCGAGGAAGGCCATCTTAGCTGAGATGGGATATGAGTTCACCGTCC TAACTGCAGATATTGATGAAAAGGCCATCAGAAAGGAAATGCCAGAGGAGTTGGTAATGGCTCTTGCTGAAGCTAAGGCTGATGCAATTATAGCAAAACT ACAATCCAGCAATTACCAAGAGGAGAATGCTGGCGTTGAGCCAAGTATATTAGTTACAGCAGATACAGCTGAAGCCATCTCTCAGAAGCTCCCAATCAAT GACTATGTAAAGGATGTCGAGCCAACATTTTTGATTACTTCTGATCAAGTGGTTGTGTATGATGGTGCAATAAGGGAAAAGCCAAGCAACGAGGAAGAAG CACGGCAGTTCATGAAAGACTATTCTGGCACCCATGCGGCAACTGTTGGATCAGTTGTAGTAACAAATCTTAAGACTGGTGTCAGGAAAGGAGGATGGGA CAGAGTGGAGATCTATTTCCACGAAATACCCGACCAAGTCATTGACAAGCTGGTTGAAGAAGGGATTGTCCTCAAAGCTGCAGGAGGGCTCATAATAGAA CATCCTCTAATAGTGCCTTATGTTAAACAAGTGGTGGGAACAACTGATAGTGTAATGGGACTTCCCAAACTTCTTACTGAAAAGCTTCTTCAGGAGGTTG TTTAA
AA sequence Show only first row Show all	>Lus10002531 pacid=23157297 polypeptide=Lus10002531 locus=Lus10002531.g ID=Lus10002531.BGIv1.0 annot-version=v1.0 MEANKTPTVKVILGSASIARKAILAEMGYEFTVLTADIDEKAIRKEMPEELVMALAEAKADAIIAKLQSSNYQEENAGVEPSILVTADTAEAISQKLPIN DYVKDVEPTFLITSDQVVVYDGAIREKPSNEEEARQFMKDYSGTHAATVGSVVVTNLKTGVRKGGWDRVEIYFHEIPDQVIDKLVEEGIVLKAAGGLIIE HPLIVPYVKQVVGTTDSVMGLPKLLTEKLLQEVV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G42770			Maf-like protein (.1.2)		Lus10002531 [exp]	0	1
AT4G33380			unknown protein		Lus10009765 [exp]	6.6	0.8382
AT3G55830		EPC1	ECTOPICALLY PARTING CELLS, Nuc...		Lus10028274 [exp]	8.4	0.8058
AT4G14455		ATBS14B ,ATBET1...	ARABIDOPSIS THALIANA BET1P/SFT...		Lus10041158 [exp]	9.7	0.7868
AT4G35410			Clathrin adaptor complex small...		Lus10003641 [exp]	10.6	0.7976
AT5G58030			Transport protein particle (TR...		Lus10003634 [exp]	10.9	0.7861
AT1G51260		LPAT3	lysophosphatidyl acyltransfera...		Lus10027375 [exp]	13.4	0.8022
AT5G04490		VTE5	vitamin E pathway gene 5 (.1)		Lus10017447 [exp]	15.5	0.7666
AT5G66410		PLP3B	phosducin-like protein 3 homol...		Lus10025176 [exp]	15.9	0.7866
AT5G53530		VPS26A	vacuolar protein sorting 26A (...		Lus10041291 [exp]	29.5	0.7503
AT1G11050			Protein kinase superfamily pro...		Lus10018860 [exp]	29.6	0.7706

Compare expression of checked genes

Lus10002531 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.