Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G70320 1083 / 0 UPL2 ubiquitin-protein ligase 2 (.1) AT1G55860 1082 / 0 UPL1 ubiquitin-protein ligase 1 (.1.2) AT3G17205 247 / 2e-66 UPL6 ubiquitin protein ligase 6 (.1.2.3) AT3G53090 213 / 3e-55 UPL7 ubiquitin-protein ligase 7 (.1.2) AT4G12570 179 / 3e-45 UPL5 ubiquitin protein ligase 5 (.1) AT5G02880 151 / 6e-36 UPL4 ubiquitin-protein ligase 4 (.1) AT4G38600 116 / 3e-25 UPL3, KAK UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032830 [exp] 3269 / 0 AT1G55860 1189 / 0.0 ubiquitin-protein ligase 1 (.1.2) Lus10032589 [exp] 1100 / 0 AT1G55860 4402 / 0.0 ubiquitin-protein ligase 1 (.1.2) Lus10035589 [exp] 214 / 2e-55 AT3G53090 1385 / 0.0 ubiquitin-protein ligase 7 (.1.2) Lus10010493 [exp] 191 / 1e-48 AT4G12570 830 / 0.0 ubiquitin protein ligase 5 (.1) Lus10017098 [exp] 180 / 5e-45 AT3G17205 1249 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Lus10008636 [exp] 166 / 2e-40 AT3G53090 1270 / 0.0 ubiquitin-protein ligase 7 (.1.2) Lus10019908 [exp] 143 / 2e-33 AT4G38600 1545 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2) Lus10003792 [exp] 134 / 4e-33 AT4G12570 409 / 3e-136 ubiquitin protein ligase 5 (.1) Lus10027324 [exp] 116 / 1e-26 AT4G12570 373 / 1e-121 ubiquitin protein ligase 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G110500 [exp] 2595 / 0 AT1G55860 1125 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.001G368600 [exp] 1097 / 0 AT1G55860 4297 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.011G094100 [exp] 1091 / 0 AT1G55860 4187 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.010G150000 [exp] 244 / 2e-65 AT3G17205 1506 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Potri.008G101300 [exp] 239 / 1e-63 AT3G17205 1432 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Potri.016G096500 [exp] 215 / 8e-56 AT3G53090 1447 / 0.0 ubiquitin-protein ligase 7 (.1.2) Potri.016G012900 [exp] 187 / 1e-47 AT4G12570 853 / 0.0 ubiquitin protein ligase 5 (.1) Potri.006G011701 [exp] 185 / 5e-47 AT4G12570 842 / 0.0 ubiquitin protein ligase 5 (.1) Potri.009G134300 [exp] 130 / 1e-29 AT4G38600 2234 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2) Potri.016G059800 [exp] 129 / 2e-29 AT4G12570 733 / 0.0 ubiquitin protein ligase 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06012 [flax] [poplar] DUF908 Domain of Unknown Function (DUF908) CL0552 [flax] [poplar] Hect PF00632 [flax] [poplar] HECT HECT-domain (ubiquitin-transferase) CL0552 [flax] [poplar] PF06025 [flax] [poplar] DUF913 Domain of Unknown Function (DUF913) CL0214 [flax] [poplar] UBA PF00627 [flax] [poplar] UBA UBA/TS-N domain
Representative CDS sequence Show only first row Show all	>Lus10002605 pacid=23178704 polypeptide=Lus10002605 locus=Lus10002605.g ID=Lus10002605.BGIv1.0 annot-version=v1.0 ATGGCAGGGGAAAGATCTAACTTGCCGTCTAGGTTACGGCAGCTTTTGTCCGGTGAAAGCCTAATCGGGCCTTCCATTAAACTCGATTCTGAGCCTCCTT CAAAGATTAAAGCATTCATTGAAAAGGTCATCCAGAGTCCGTTGCAAGATATTGCAATACCACTCTCTTGTTTCCACTGGGAGTACAGCAAGGGGAATTT TCACCATTGGAGGCCTCTCTTCTTGCATTTTGATACATACTTCAAGACTTACCTGTCTAGTAGGAATGATCTCCGCTTATCAGATGGCATCTTAGGAAAT GATAATGCATTTCCAAAACAAGCAATTCTACAGATTTTGCGGGTCATGCAAATAATTTTGGAGAATTGTCCTAATAAGAGCTCATTTGATGGTTTGGAGG TTGGTGCTGTGTTTTCTCTTCAGCATTTCAAGCTTCTTTTGGCATCTACAGATCCAGATATTCTCATTGCTTCTTTGGAAACACTTGTGGCCCTTGTGAA AATTAATCCATGTAAGCTGCATGGGGGTGGGAAGTTGATCGGCTGTGGTTCTGTAAATAGCTACCTGTTGTCCCTTGTTCAGGGTTGGGGGAGCAAAGAA GAGGGCCTAGGTCTATATTCATGTGTTACAGCAAATGAAAGGACTCAAGAAGAGGGACTTTCTTTATTTCCATCTGATGCAGAAGATGATGGTCAAAAGT CTCAGTGCCGAATGGGTTCCACCCTTTATTTCGAATTGTATGGTCATAATTCTCAGAGGATGGTTGAGGGTATTGTTTCGTCTAGTTTGCAAGCCATACA TGTGCCAGATTTGCATTTAAGGAAGGAAGATGATCTATTGTTGTTGAAGGAATGCATTGAGCAATACAATGTTCCTCCTGATCTTCGATTCTCATTGTTG AGCCGAATCAGATTTGCTCGAGCCTTCCGGTCTCCTGGAATATGTAGGTTGTACTGCAGGATTTGCCTCCTTGCATTTATTGTACTCGTCCAGTCGAGTG ATGCTAATGATGAACTTACGTCCTTTTTTGCAAATGAGCCCGAGTATACGAATGAGTTGATCAGGATTGTGAAATCTGAAGAAACTATTCCCGGCAGCAT CAGAACACTTGCAATGCAAGCCTTAGGGGCACAGTTAGCTGCTTATTCAGCTTCTCATGAGCGAGCTCGGATACTAAGTGGATCAAGCATCAGCTTTGCT GTTGGAAACCGGATGATTCTGCTGAATGTACTACAGAGAGCTGTTCTTTCATTGAAGAATTCAAGTGACCAATCTTCACTTTCATTTGTGCAAGCACTTC TTCAGTTCTATTTGCTCCATATAGTTTCTTCCTCGGCTTCAGGAAGCAATGTACGTGGGTCTGGGATGGTCCCTACATTTTTGCCACTTTTGGAGGATTC AGATTCCACCCATATGCACCTTGTTTATTTGGCCGTGAAAGCCCTACAGAAGCTGATGGATTATAGTAGTTCTGCTGTCTCATTACTTAGGGATCAGGGA GGTGTAGAGCTTTTGGCACAAAGGCTACAGATTGAAGTACATAGAATCATAGATTCTACTGTGGAGAATGATAATTCAATGATCATTGGTGAATGCTCAA GGGTTAATGACAATCTCATATTTACTCAAAAACGACTTGTTAAGGTTCTTTTAAAGGCCCTTGGGTCTGCTACCTATGCCCCTTCCAACAACACCAGATC TGTGAGCTCTCACGACAGTTCTTTGCCTTCTACATTGTCTCTTATCTATCAGAACTCAACTAAATTTGGCGGTGATATTTACTATTCAGCAGTCACTGTT ATGAGTGAAATCATCCACAAAGATCCAACTTGTTTCTCGGCATTGCAAGAAATGGGTCTCCCTGATGCATTTTTATCATCAGTGGTGGCTGGAGTACTTC CTTCTTCTAAAGCTGTTACTTGTGTTCCTAATGGTCTTGGTGCCATATGCCTAAATGCAAAAGGCTTAGAAGCAGTAAAAGAAACCTCTGCTTTGCGATT TCTGATTGACATCTTTACCAGCAGAAAGTACGTGTTAGCAATGAATGAAGCTATTGTTCCGTTGGCTAATGCGGTGGAGGAGCTTCTCAGACATGTTGCT TCACTAAGAGGAGCTGGAGTTGATATAATTATTGAAATTATTGATAAAATGACTTCGTTTGGAGATGTGAATGGCGCAGAGTCATCAGGGAAGGCTGCTG GTAGTAATGAAATGGAAATGGACTTGGAAGATAAGGAAGGTGATGATTTGGGCACTGAAGGCTTGAGCAATGATCAATTTGTTCAACTCTGCATATTTCA TTTGATGGTTTTGCTGCATAGAACAATGGAAAATTCAGAGACATGTCGCTTGTTTGTAGAGAAGTCAGGCATTGAAGCGTTATTGAAACTTCTATTGCGG CCAGCCATTGTCCAGTCATCTGAAGGGATGTCTATTGTGCTGCACAGCACGATGGTTTTCAAGGGTTTTACCCAACATCACTCTGCTCCTCTGGCACGTG CTTTCTGTTCGTCTCTTAGAGAACATCTTAAGATATCTATGGTTGGTTTTGGATCTGTTTCAGGCACTTTCTTGCTGGATCCTAGGGCTGAAATTGATGA TGCAATTTTTTCGTCCTTTTCCCTGTTCGTGTTCCTTCTATTTCTTGCTGCCTCAAAAGACAATCGCTGGGTAGCTGCTTTGCTGACTGAATTTGGAAGT GGCAGCAAAGATGTTTTGGAAGATATTGGACGTCTACATCGTGAAGTTCTTTGGCAGATTGCTTTATTTGAAGATGCCAAGCTTGAGATGGAAGATAATA CTGCCACTTCGGCTGAGCTTCAGCAGTCTGAGCCAACCAATGATTCTGAAGAGCAGCGATTTAATTCGTTCAGACAGTTTCTTGATCCCTTATTGAGGAG GAGGACAGCAGGGTGGAGTATTGAATCACAATTTTTTGATCTCATAAACTTGTATCGGGATCTTGGACGTACTGCTGGATATACCCAGAGAATGGGAACT GATGGTCCATTGAGCCGGTTTGGATCCGTTAATTCACACCCCAATGAGCCTTCTACAACTATTGGAGATGCTGGTCGGAAAGAGAGTGACAAGCAAAGAT CTTACCATTCTTCTTGCTGTGACATGATGAGGTCCCTTTCTTTCCATATTACACATTTGTTCCAAGAATTGGGAAAGTCAATGTTACTTCCGTCTCGTCG TCGAGACGATACTGTAACTGTCTCCCCTTCTTCTAAAGTGGTTGCACGTACATTTGCTTCTATTGCATTGGATCACATGGACTTTACTGGTCACGTAAGC TCTTCTGGGTCAGATGTATCAAAGTCAGCAAAATGTCGCTACTTTGGCAAGGTTATCGATTTCATCGACGGTATTCTACTGGATAGGCCTGATTCCTGTA ACCCAATATTGCTAAATTGCTTCTATGGACATGGAGTTATTCAATCAGTTCTGACCACATTTGAGGCCACAAGTCTTCTGCTATTTTCAGTAAACAGGGC TCCATCATCCCCTATGGATACTGATGATGAGACCACAAAACAGGATGCTAAAGATGTTGCTGATCATTCCTGGATTTATTGCCCCTTGTCTAGCTACAGC AAACTTATGGACCACTTGGTCACATCATCATTTATTTTATCTCCATTCACCAAGCACCTCCTTATACAGCCACTGGAAAATGCAGTAATAACATTTCCTA GGGACCCAGAGACATTTGTAAAAATACTACAGTCTATGGTGCTGAAGGCAGTGCTTCCTGTTTGGACACATGCACAATTTCCTGACTGCAGTATTGAGTT CATCAGTACAGTGATTTCAATCATTAGGCATGTTTATTCTGGAGTTGAAGTGAAAAATATTGCTAGCAATGCCAATGCTCGAGTTATTGGTCCCCCTCCA AATGAAACAACTATTTCAACAATTGTGGAGATGGGGTTTTCCAGGGCTAGGGCTGAAGAAGCTCTCAGGCAGGTGGGGTCGAATAGTGTAGAATTGGCAA TGGAGTGGTTGTTCTCTCATCCTGAGGAGGTTCAAGAAGATGATGAACTAGCCCGTGCGCTTGCTATGTCGCTTGGTAATTCAGAATCAGATGTGAAAGA AGATGCAGCAAATTCTAGCACACAACAGCTTGAAGAAGACACTGTCCAGCTTCCCCCAGTTGGGGATTTGATAGCAACATGTATCAAGCTGCTGCAAGTT AAGGAATCTGTAGCTTTTCCAGTCCGTGACCTGCTTTCTCTAATTTGCTCACAGAATGATGGGCAATATAGGTCAAATGTGATCAGTGTCATTCTTGACC AAGTGAATGGAAGAAGTATGGCTTCTGATGAAAAAAAGTCTACCATTTTGTTTTCGTTGTTTCATGTTCTCGCCTTAATTCTTCATGAGGATGTTGGGGC CAGAGAAGTTGCCTCCAAGAATGGTCTGGTTCAGGTTGTGCTGGATTTACTTTCAGAATGGGATTCTGGTTGTTCAGTGGGCCAGCATGTCCCAAAATGG GTAACAACTGCTTTTCTTGCTATGGATCGGTTGCTGCAAAGTGATAAAAAACTGGAGTCCGAAATAATAGAGCAGCTGAAGAAGGATAGTACTAGCATTC AGCAAACGTCACTGACTATTGATGAGGAAAAGCGGGACAAGTTGCAGATTGCACTGGGATCTCCATTGAAGCACATTAGCATTGATGAACAGAAGAGACT TGTCCAAATTGCTTGCAATTGCATAAAGAAGAAACTTCCATCAGAGATGATGCATGCTGTTCTGCAGCTGTGTTCTAGTCTCACTCGACCTCATTCCAAT GCCATCAGCTTTCTAGAAGCAGAGGGTGTAAGTTCGTTGCTTTCTTTGCCAACAAGTAGTCTTTTTCCTGGCTTTGACACTGTTGCTGCCTCTATCATCT GTCATGTTCTTGAAGATCCTCAAACTCTCCAGCAAGCCATGGAATCTGAGATAAGGCATAGCCTTGTTGCTGCTGCTAACAGACACTCAAATGGAAGAGT TACTCCTCGCAATTTCCTTGCGAACTTGAGTTCTGTGATATCCAGGGACCCTGTTACTTTTATGCAGGCTGCAAGGGCTGTTTGCCAAGTTGAGATGGTG GGGGAGAGGTCTTACATTGTGTTGATTAAAGATCGTGAGAAAGATAAAATCAAAGAGAAAGAAAAAGACAAGGATAAAACCTTGGAGAAAGAAAAGCCTC ACTCTAGCGAGAGGAAGCATGCTTTTGGCAATAACACAACAGCAGCAGGTAGTGGACATGGCAAACCTAACGATACTAACTCCAAGAGTGTGAAGGCTCA TCGGAAGTCTCCTCAGAGCTTTGTACATGTTATTGAGCTGCTTTTGGATTCAATCATTAGCTTTGTACCACCTACTAAGGATGAGAAACCATCATTGAAT GATATGGATATAGACGTTGCTGCTGTTAAAGGGAAAGGTGAAGCTGCTGCAACATTTATTGAAGTTGGTTTGGTAAAATCGTTGACTCAAACTCTTGAAG TATTAGATCTCGATCATGCTGATTCTCCGAAAGTTGTAACTGGGCTTATCAAAGCTCTGGAGTTGGTGACAAAGGAACACATCAATACCTCTGACCCCAG TGCAGTGAAAGGTGACAATGCTTCAAAAACTCCTATTGAGGTTCAAGCCAGAGGAACAGAGAACCATGCTTCTGGATCTCAGCCCACTGAACTTGAGATT CCATCAAATCCTCCTGTGCTAGCTGACCGTGTTGAATTGCCAAATCCTGCTCAAAATTATGGTGGATCTGAAACTGTCACAGATGATATGGAACATGACC AGGATCTCGACGGAAGTTTTGTTCCGGCAACTGAGGACGATTATATGCAGGAAAGTTCTGGGGATACAAGGGGTATTGAAACTGGACTGGATACAGTTGA AATTCAATTTGACATCCAGCCTCGCGGACAGGAAATTCTTGAAGAAGATGAAGATGAGGATATGTCTGCTGATGAAGGGGATGAAGTGGATGATGATAAT GAGTCTGAAGATGATGATGACGAGGATGAAGATGATGAGGAACACAATGACTTGGAAGAAGATGAAGTCCATCACTTGCCACACCCTGATACAGACCAAG ATGATCATGATATGGATGATGATGAATTTGATGAGGAAGTGTTGGAGGAGGATGATGAAGATGAAGAACAAGATGATGATGGAGTTTTATTACGCTTAGA GGAAGGGATCAATGGGATAAATGTTTTCGATCATATCGAAGTGTTTGGAAGAGACCATAGCTTCCCTAGTGAAACTCTGCATGTGATGCCGGTTGAAGTT TTTGGTTCAAGACGTCAAGGACGGACGACATCCATCTACAATCTTCTTGGTAGGGGTGGTGATAGCTCTGCTCCATCCCGACATCCCCTTCTGAGTGGAA ACCCTCAGCAGATGGCCATTTCCAGTCAAGCAGATAGGGATCTTGAGAATACGTCGCAGCAGTTGGATACTATTTTCCGTTCATTGAGAAATGGGCGCCA TGGACACCGATTAAATCTGTGGCTGGATGATAATCAACAAACTGGTGGTGTTAATTCATCTGTACCTCCTGGCCTTGAGGATTTGCTTGTTTCTCAGTTA AGACAATCATCCTCTGCAAGATCATCTGATCCTAACCCGTTGGCAACTGCACCCAAGGCTGATGGTGCTGTGAGCCAATCTCAAGAACCTGAAGCACAGG CTGGTGCCCTTGTTGAGAACAATGTGGACCATGAAACTAGCAATGCCCATCATGCTGCTGGTGTAGTAAATGATGAATCTGCTACTGTCACTGTCAGGCC TCTTGCTGATGATTCTCATTCGCATACCGTTGAAATGCAGTTTGAACAGAATGATGCAGCTGCACGTGATGTGGAAGCAGTAAGCCAAGAAAGTGGAGGA AGTGCAGCAACATTAGGGGAAAGCCTTAGGAGTCTTGATGTTGAAATTGGAAGTGCCGATGGACATGATGATGGTGGAGAAAGGCAAGGGTCAGCTGATA GAATGCCTTTGGATCCTCAGGCAACTCGAAGAAGATCTAATGTGTCCTTCGGTAATTCTGCTCCTGCAAGTGTGAGAGATGCATCTCTCCATAGTTTGAC TGAAGTTTCAGAAAATTCTAGCAGGGATGCAGATCAAGATGGTCCAGCGGTGGAGCAGCAAGCTGCTGGTGATGCGGGCGCAGGATCGATTGATCCTGCT TTCTTGGATGCCCTTCCTGAGGAGTTGCGTGCTGAAGTTCTTTCTGCTCAACAGGGCCAAGTTGCACAGCCTTCAAGTGCTGAACAACAAAGCACGGGTG AAGATATAGATCCTGAATTTCTTGCTGCTCTTCCTCCTGAAATACGAGCTGAAGTTTTAGCTCAACAACAAGCACAGCGCCTGCATCAATCTCATGAACT TGAAGGCCAGCCTGTGGAAATGGATACAGTGTCAATTATTGCTACATTTCCTTCAGATTTGCGGGAAGAGGTTCTCCTAACATCTTCAGATGCTGTGCTT GCAAATTTAACTCCTGCTTTGGTTGCGGAGGCTAATATGTTACGTGAAAGGTTTGCACACCGTTACCGTAACCGTACACTTTTTGGTATGTATCCCAGAA GCCGTAGAGGTGAGTCATCTCGACGGGGTGAGGGCACTGGTTTTAGCCTCGAGAGAGGTGGGATTGCCTCGAGGAGATCTATTGCTGGCAAGGTTGTGGA AGCTGATGGATCTCCGTTAGTTGAGACAGAAGCTGTCCATGCGATGATTCGTGTGCTTCGAATCGTGCAGCCCCTCTATAAAGGTCCACTGCAGAGGCTT CTACTGAACATATGTGCTCATGGAGAAACCAGAATTACTTTGGTCAAAATCCTGATGGACATGCTGATGGTTGACATGAGAAAGTCCACCAATAGTTTAA GGACTGCTGAACCTTCATATCGCCTTTATGCTTGTCAAAACAATGTCATGTATTCGCGACCACAGTCTTTTGACGGAGTTCCACCTTTGGTTTCTCGGCG TATTCTGGAGACTCTAACTTACTTGGCTAGAAACCATCCTTATATGGCCAAAATTTTGCTTCAGTTTAGGTTACCTTTGCCTAGTCAACAACATACAGAG GATGTTGTTGTATCACGTGGTAAAGCAGTTACGACTGAAGAGTTTGAAGCAGATGGTAATCAGCATGAGGGTGGATATGTGTCAATCGCTTTGCTTCTGA GCCTCTTGAAACAACCACTTTATTTGAGAAGTATAGCACATCTGGAACAGTTGCTCAGCTTACTGGAGGTTATTATTGACAATGCTGAAAGCAAGTCAAG TGTATCAGATAAATCTCCGGATACAAAAAATCAGGATGCTGAACTTCATACTTCACAGGCAGATACAGGAAGGGAAGCGGGTGTTGCTGCTGGTTCATCA TCAGCTATTGAATCATCCAAACCGACTACCTCTAGTGCAAGTAATGAATGCGATACTCTACATATCTTGCTTAACCTGCCACGACCAGAACTCCGGCTCC TTTGTTCATTACTTGCACAGGAAGGTCTATCAGATAATGCGTATACTCTCGTAGCAGAGGTTATGAAGAAGCTAGTTGCTATCGCTCCAACTCATTGTCA TCTATTCATCACCGAGTTAGCTGCTGCTATAGAGAAGCTGACTATATCTGCTATGCGTGAGCTGCATATATTTGGGGAAGCGGTAAAAGCACTCCTGAGT ACAACATCAACTGATGGAGCTGCCATTTTAAGAGTTATACAGGCACTAAGTGCTTTTATAACTTTGCTGGCTGATAAAGATAAAGATCAGCCGAGCCTTC CAGAAAAGGAACTTACTGATACTTTGTCTCAGGTTCATAACATTAATGCAGCTCTGGAGCCTTTGTGGTCAGAGCTTAGCACATGCATAAGCAAAATAGA GAGCTTTTCAGAATCGTCATCAGATATGTTACTTCCACCAAGAAATCCTGTACTGAAGCCTTCTGGTACAATGCCTCCTCTCCCGGCGGGCTCTCAGAAT ATCTTACCTTATATCGAGTCCTTTTTTGTGATGTGCGAAAAGTTGCACCCAGCACAACCAGGGTCTGGTCATGACTATGGTATTGCGGGTACCGAGGTTG ATGATACAAGCAACTCTTCTGCTCAGCAGAAAGTCTCAGGTCCTGTTTCAAGAGTTGATGAGAAACATGTTGCCTTTGTAAGGTTCTCCGAGAAACATAA GAAACTGCTGAATGCTTTCATCCGTCAGAATCCTGCACTGCTTGAGAAGTCATTCTCACTCTTCTTGAAGGTGCCCCGCTTCATTGATTTTGACAACAAG AGAGCGCACTTCAGATCAAAAATTAAGCATCAACATGATCATCACCACAGTCCCTTGAGAATATCTGTAAGAAGAGCTTACATCCTCGAAGATTCTTATA ACCAACTCCGCATGCGGTCAACTCAAGACTTGAAGGGGAGGTTGACTGTTCACTTCCAAGGAGAGGAGGGTATCGATGCTGGTGGTCTGACAAGGGAATT GTATCAGCTGCTTTCCAGGGGTTTTTTTGACAAGGGAGCATTGCTTTTCACAACAGTTGGCAATGACTCAACATTTCAGCCCAACCCCAACTCCGTCTAT CAAACTGAACATCTATCATACTTCAACTTTGTTGGGAGAGTTGTCGGGAAAGCACTATTTGATGGGCAGCTCTTAGATGTCCACTTTACCAGATCTTTTT ATAAGCATATTTTAGGAGTGAAAGTTACATATCACGACATTGAAGCAATTGATCCTGATTATTTCAAAAACTTGAAATGGTTGCTTGAGAATGATATAAG CGATTTATTGGACCTTACCTTCAGTATTGATGCTGATGAGGAAAAGCTAATTTTGTATGAAAGAACCGAGGTCACTGATCATGAATTGATTCCTGGAGGA CGCAACATTAAAGTGACAGAGGAAAACAAGCACCAGTATGTCGATTTAGTTGCGGAGCATCGGTTGACTACAGCTATTCGTCCTCAAATAAATGCTTTCC TGGAAGGGTTTACTGAATTGGTTCAAAGAGAGTTGATATCCATATTTAATGATAAGGAATTGGAATTGTTGATAAGCGGTCTTCCGGATATCGACTTGGA TGACATGAGAGGAAACACAGAGTATTCAGGGTACAGTCCTGCATCTCCAGTTATCCAGTGGTTCTGGGAAGTTGTTCAGGGATTCAGCAAGGAGGATAAG GCTCGACTGTTGCAATTCGTGACTGGCACGTCCAAGGTACCATTAGAAGGGTTCAGCGCCCTTCAAGGGATATCAGGAGCACAGAAATTCCAGATACACA AAGCCTACGGTAGTGCTGATCACTTGCCATCAGCTCATACTTGTTTCAACCAATTGGATTTGCCAGAGTATCCTTCAAAAGAGCATTTGGAGGAGAGGCT GTTGCTTGCAATCCATGAGGGGAGTGAAGGTTTTGGATTCGGCTAA
AA sequence Show only first row Show all	>Lus10002605 pacid=23178704 polypeptide=Lus10002605 locus=Lus10002605.g ID=Lus10002605.BGIv1.0 annot-version=v1.0 MAGERSNLPSRLRQLLSGESLIGPSIKLDSEPPSKIKAFIEKVIQSPLQDIAIPLSCFHWEYSKGNFHHWRPLFLHFDTYFKTYLSSRNDLRLSDGILGN DNAFPKQAILQILRVMQIILENCPNKSSFDGLEVGAVFSLQHFKLLLASTDPDILIASLETLVALVKINPCKLHGGGKLIGCGSVNSYLLSLVQGWGSKE EGLGLYSCVTANERTQEEGLSLFPSDAEDDGQKSQCRMGSTLYFELYGHNSQRMVEGIVSSSLQAIHVPDLHLRKEDDLLLLKECIEQYNVPPDLRFSLL SRIRFARAFRSPGICRLYCRICLLAFIVLVQSSDANDELTSFFANEPEYTNELIRIVKSEETIPGSIRTLAMQALGAQLAAYSASHERARILSGSSISFA VGNRMILLNVLQRAVLSLKNSSDQSSLSFVQALLQFYLLHIVSSSASGSNVRGSGMVPTFLPLLEDSDSTHMHLVYLAVKALQKLMDYSSSAVSLLRDQG GVELLAQRLQIEVHRIIDSTVENDNSMIIGECSRVNDNLIFTQKRLVKVLLKALGSATYAPSNNTRSVSSHDSSLPSTLSLIYQNSTKFGGDIYYSAVTV MSEIIHKDPTCFSALQEMGLPDAFLSSVVAGVLPSSKAVTCVPNGLGAICLNAKGLEAVKETSALRFLIDIFTSRKYVLAMNEAIVPLANAVEELLRHVA SLRGAGVDIIIEIIDKMTSFGDVNGAESSGKAAGSNEMEMDLEDKEGDDLGTEGLSNDQFVQLCIFHLMVLLHRTMENSETCRLFVEKSGIEALLKLLLR PAIVQSSEGMSIVLHSTMVFKGFTQHHSAPLARAFCSSLREHLKISMVGFGSVSGTFLLDPRAEIDDAIFSSFSLFVFLLFLAASKDNRWVAALLTEFGS GSKDVLEDIGRLHREVLWQIALFEDAKLEMEDNTATSAELQQSEPTNDSEEQRFNSFRQFLDPLLRRRTAGWSIESQFFDLINLYRDLGRTAGYTQRMGT DGPLSRFGSVNSHPNEPSTTIGDAGRKESDKQRSYHSSCCDMMRSLSFHITHLFQELGKSMLLPSRRRDDTVTVSPSSKVVARTFASIALDHMDFTGHVS SSGSDVSKSAKCRYFGKVIDFIDGILLDRPDSCNPILLNCFYGHGVIQSVLTTFEATSLLLFSVNRAPSSPMDTDDETTKQDAKDVADHSWIYCPLSSYS KLMDHLVTSSFILSPFTKHLLIQPLENAVITFPRDPETFVKILQSMVLKAVLPVWTHAQFPDCSIEFISTVISIIRHVYSGVEVKNIASNANARVIGPPP NETTISTIVEMGFSRARAEEALRQVGSNSVELAMEWLFSHPEEVQEDDELARALAMSLGNSESDVKEDAANSSTQQLEEDTVQLPPVGDLIATCIKLLQV KESVAFPVRDLLSLICSQNDGQYRSNVISVILDQVNGRSMASDEKKSTILFSLFHVLALILHEDVGAREVASKNGLVQVVLDLLSEWDSGCSVGQHVPKW VTTAFLAMDRLLQSDKKLESEIIEQLKKDSTSIQQTSLTIDEEKRDKLQIALGSPLKHISIDEQKRLVQIACNCIKKKLPSEMMHAVLQLCSSLTRPHSN AISFLEAEGVSSLLSLPTSSLFPGFDTVAASIICHVLEDPQTLQQAMESEIRHSLVAAANRHSNGRVTPRNFLANLSSVISRDPVTFMQAARAVCQVEMV GERSYIVLIKDREKDKIKEKEKDKDKTLEKEKPHSSERKHAFGNNTTAAGSGHGKPNDTNSKSVKAHRKSPQSFVHVIELLLDSIISFVPPTKDEKPSLN DMDIDVAAVKGKGEAAATFIEVGLVKSLTQTLEVLDLDHADSPKVVTGLIKALELVTKEHINTSDPSAVKGDNASKTPIEVQARGTENHASGSQPTELEI PSNPPVLADRVELPNPAQNYGGSETVTDDMEHDQDLDGSFVPATEDDYMQESSGDTRGIETGLDTVEIQFDIQPRGQEILEEDEDEDMSADEGDEVDDDN ESEDDDDEDEDDEEHNDLEEDEVHHLPHPDTDQDDHDMDDDEFDEEVLEEDDEDEEQDDDGVLLRLEEGINGINVFDHIEVFGRDHSFPSETLHVMPVEV FGSRRQGRTTSIYNLLGRGGDSSAPSRHPLLSGNPQQMAISSQADRDLENTSQQLDTIFRSLRNGRHGHRLNLWLDDNQQTGGVNSSVPPGLEDLLVSQL RQSSSARSSDPNPLATAPKADGAVSQSQEPEAQAGALVENNVDHETSNAHHAAGVVNDESATVTVRPLADDSHSHTVEMQFEQNDAAARDVEAVSQESGG SAATLGESLRSLDVEIGSADGHDDGGERQGSADRMPLDPQATRRRSNVSFGNSAPASVRDASLHSLTEVSENSSRDADQDGPAVEQQAAGDAGAGSIDPA FLDALPEELRAEVLSAQQGQVAQPSSAEQQSTGEDIDPEFLAALPPEIRAEVLAQQQAQRLHQSHELEGQPVEMDTVSIIATFPSDLREEVLLTSSDAVL ANLTPALVAEANMLRERFAHRYRNRTLFGMYPRSRRGESSRRGEGTGFSLERGGIASRRSIAGKVVEADGSPLVETEAVHAMIRVLRIVQPLYKGPLQRL LLNICAHGETRITLVKILMDMLMVDMRKSTNSLRTAEPSYRLYACQNNVMYSRPQSFDGVPPLVSRRILETLTYLARNHPYMAKILLQFRLPLPSQQHTE DVVVSRGKAVTTEEFEADGNQHEGGYVSIALLLSLLKQPLYLRSIAHLEQLLSLLEVIIDNAESKSSVSDKSPDTKNQDAELHTSQADTGREAGVAAGSS SAIESSKPTTSSASNECDTLHILLNLPRPELRLLCSLLAQEGLSDNAYTLVAEVMKKLVAIAPTHCHLFITELAAAIEKLTISAMRELHIFGEAVKALLS TTSTDGAAILRVIQALSAFITLLADKDKDQPSLPEKELTDTLSQVHNINAALEPLWSELSTCISKIESFSESSSDMLLPPRNPVLKPSGTMPPLPAGSQN ILPYIESFFVMCEKLHPAQPGSGHDYGIAGTEVDDTSNSSAQQKVSGPVSRVDEKHVAFVRFSEKHKKLLNAFIRQNPALLEKSFSLFLKVPRFIDFDNK RAHFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTRELYQLLSRGFFDKGALLFTTVGNDSTFQPNPNSVY QTEHLSYFNFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWLLENDISDLLDLTFSIDADEEKLILYERTEVTDHELIPGG RNIKVTEENKHQYVDLVAEHRLTTAIRPQINAFLEGFTELVQRELISIFNDKELELLISGLPDIDLDDMRGNTEYSGYSPASPVIQWFWEVVQGFSKEDK ARLLQFVTGTSKVPLEGFSALQGISGAQKFQIHKAYGSADHLPSAHTCFNQLDLPEYPSKEHLEERLLLAIHEGSEGFGFG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Lus10002605 [exp]	0	1
AT5G24740			Protein of unknown function (D...		Lus10003835 [exp]	2.0	0.9820
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Lus10033980 [exp]	2.0	0.9788
AT2G36850		CHOR, ATGSL8, A...	CHORUS, glucan synthase-like 8...		Lus10040892 [exp]	3.0	0.9790
AT1G02080			transcription regulators (.1.2...		Lus10042877 [exp]	3.2	0.9796
AT3G02260		CRM1, TIR3, LPR...	UMBRELLA 1, TRANSPORT INHIBITO...		Lus10034360 [exp]	5.0	0.9777
AT5G15680			ARM repeat superfamily protein...		Lus10035142 [exp]	5.2	0.9703
AT5G02310		PRT6, CER3	proteolysis 6 (.1)		Lus10025352 [exp]	5.9	0.9738
AT4G39420			unknown protein		Lus10006814 [exp]	6.5	0.9755
AT1G77800			PHD finger family protein (.1....		Lus10009785 [exp]	6.6	0.9581
AT4G17140			pleckstrin homology (PH) domai...		Lus10003007 [exp]	7.1	0.9573

Compare expression of checked genes

Lus10002605 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.