Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10002646 pacid=23168810 polypeptide=Lus10002646 locus=Lus10002646.g ID=Lus10002646.BGIv1.0 annot-version=v1.0 ATGATCATGGCATCGGAGGAAGAGGAGAAGATGATATGGGAGGAGCTAGAGAAGGAGGTAAAGAACATCATCAAGGAAGAAATCAAACAAGGAATCTGCC ATCTTGTACTCAGGCTACACAGGCTGATACATCATCGCAACAGCAATGCCGCCGAATCATCGGGAGTTTGCGTTACTTTGAGGCTGGAAGGAGGAGGTAG TAGTGAGGATGGTGATCGTAAGTTCGAGATCAGGGAGATTAAGAGAGAAGCTTTGATCCAAGAGAAATATGGTCGTCGTCGTCATCATCATCAGCAGCTG CGCAGTAGTAGTAAAAATGATGGGATAAAGAAGCTTCGTTGGGAAGAGTGTTTAAGAAGAGCGTCGTCTTCGTCGTCGTCACTGATGGGAAGCGGCCGCG GCCGTGACATTGATGTAAAGGCGGCGGAGTTGGGATGGAAATATTAA
AA sequence Show only first row Show all	>Lus10002646 pacid=23168810 polypeptide=Lus10002646 locus=Lus10002646.g ID=Lus10002646.BGIv1.0 annot-version=v1.0 MIMASEEEEKMIWEELEKEVKNIIKEEIKQGICHLVLRLHRLIHHRNSNAAESSGVCVTLRLEGGGSSEDGDRKFEIREIKREALIQEKYGRRRHHHQQL RSSSKNDGIKKLRWEECLRRASSSSSSLMGSGRGRDIDVKAAELGWKY

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10002646 [exp]	0	1
AT1G29430			SAUR-like auxin-responsive pro...		Lus10020440 [exp]	3.0	0.7267
AT4G01140			Protein of unknown function (D...		Lus10007859 [exp]	4.9	0.7735
AT4G39950		CYP79B2	"cytochrome P450, family 79, s...		Lus10023143 [exp]	13.2	0.7072
AT1G33760	AP2_ERF		Integrase-type DNA-binding sup...		Lus10006172 [exp]	18.8	0.7045
AT1G67050			unknown protein		Lus10009160 [exp]	19.8	0.7303
AT1G71680			Transmembrane amino acid trans...		Lus10008263 [exp]	21.5	0.7016
AT1G45688			unknown protein		Lus10035869 [exp]	23.5	0.6708
AT5G05260		CYP79A2	cytochrome p450 79a2 (.1)		Lus10023141 [exp]	23.9	0.6832
AT3G45600		TET3	tetraspanin3 (.1)		Lus10023218 [exp]	25.0	0.6958
AT5G63810		BGAL10	beta-galactosidase 10 (.1)		Lus10023977 [exp]	26.0	0.6955

Compare expression of checked genes

Lus10002646 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.