Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15230 406 / 3e-142 ATLIP1 lipase 1 (.1) AT5G14180 214 / 1e-66 MPL1 Myzus persicae-induced lipase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002808 [exp] 553 / 0 AT2G15230 551 / 0.0 lipase 1 (.1) Lus10027861 [exp] 401 / 2e-139 AT2G15230 438 / 2e-152 lipase 1 (.1) Lus10015159 [exp] 230 / 4e-73 AT5G14180 409 / 2e-141 Myzus persicae-induced lipase 1 (.1) Lus10038378 [exp] 227 / 2e-72 AT5G14180 377 / 2e-129 Myzus persicae-induced lipase 1 (.1) Lus10031523 [exp] 226 / 2e-71 AT5G14180 410 / 1e-141 Myzus persicae-induced lipase 1 (.1) Lus10038401 [exp] 224 / 2e-70 AT5G14180 383 / 4e-131 Myzus persicae-induced lipase 1 (.1) Lus10022349 [exp] 209 / 2e-64 AT5G14180 527 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10041571 [exp] 209 / 2e-64 AT5G14180 525 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10023171 [exp] 208 / 2e-64 AT5G14180 358 / 3e-121 Myzus persicae-induced lipase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G094900 [exp] 436 / 6e-154 AT2G15230 564 / 0.0 lipase 1 (.1) Potri.014G159800 [exp] 242 / 1e-77 AT5G14180 422 / 3e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159700 [exp] 241 / 3e-77 AT5G14180 441 / 5e-154 Myzus persicae-induced lipase 1 (.1) Potri.014G159900 [exp] 233 / 2e-74 AT5G14180 421 / 9e-146 Myzus persicae-induced lipase 1 (.1) Potri.001G332300 [exp] 217 / 3e-68 AT5G14180 533 / 0.0 Myzus persicae-induced lipase 1 (.1) Potri.017G069700 [exp] 205 / 8e-64 AT5G14180 374 / 4e-128 Myzus persicae-induced lipase 1 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10002809 pacid=23158676 polypeptide=Lus10002809 locus=Lus10002809.g ID=Lus10002809.BGIv1.0 annot-version=v1.0 ATGATCGAACACACACTTTGTACGGTTGGAAATGCTCGCGGGACATTCTGGAGTCATGGGCATATATCTTTATCCGAGGACGACAAGGACTTCTGGGATT GGAGTTGGCAGGAATTGGCAATGTATGACCTAGCAGCGATGATACACCACATTTATTCAGCAACAAGCTCGAAAGTTTTCCTTGTTGGTCATTCTCAGGG AACGATCATGTCTTTAGCGGCTCTCTCGCAGCCGAAAATTGTGGAAATGGTCGAAGCTGCTGCACTTCTGTGTCCAATTTCATACTTGGATCGTGTAACT GCTCCTCTTGTACATAAAATGGTCACCATGCACGTTGATCAGATGGTTACTGCCATGGGCATACATCAACTGAACTTCAGAAGCGAGTTTCTGATCAACC TATTGGATTCATTGTGTGAGGGGCTTCTACATTGCGACGACTTGTTGAGTTCAATAACAGGGGATAATTGCTGCTTCAACAGTTCACGAATCGACTTATA TCTCGACTACGAACCACACCCATCATCTGCGAAAAACCTGAGGCATCTTTTCCAGATGATTCGGAAGGGCACATTCGCGAAGTACGACTACGGGACGTTC AAAAACTTGAAGCAGTACGGGCAGGCATCTCCACCAGTGTTTGACCTGAGCCAGATACCAGACTCGTTGCCGCTGTGGATGGGGTACGGAGGTCTCGATG GGCTAGCTGACATCGACGACATGCAGCACACGCTTAAGGAGCTGCTGTGCAAGACGGAGCTGCTGTATCTGGAGAACTACGGTCACATCGACTTCCTTTT GAGCGTCAGAGGGAAAGAAGATGTTTATGACCATATTGTCGGATTTTTCCAATCACTTGGACAGTCTATAAGCAGTGCTTAA
AA sequence Show only first row Show all	>Lus10002809 pacid=23158676 polypeptide=Lus10002809 locus=Lus10002809.g ID=Lus10002809.BGIv1.0 annot-version=v1.0 MIEHTLCTVGNARGTFWSHGHISLSEDDKDFWDWSWQELAMYDLAAMIHHIYSATSSKVFLVGHSQGTIMSLAALSQPKIVEMVEAAALLCPISYLDRVT APLVHKMVTMHVDQMVTAMGIHQLNFRSEFLINLLDSLCEGLLHCDDLLSSITGDNCCFNSSRIDLYLDYEPHPSSAKNLRHLFQMIRKGTFAKYDYGTF KNLKQYGQASPPVFDLSQIPDSLPLWMGYGGLDGLADIDDMQHTLKELLCKTELLYLENYGHIDFLLSVRGKEDVYDHIVGFFQSLGQSISSA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15230		ATLIP1	lipase 1 (.1)		Lus10002809 [exp]	0	1
AT2G15230		ATLIP1	lipase 1 (.1)		Lus10002808 [exp]	1.0	0.9162
AT2G29970			Double Clp-N motif-containing ...		Lus10036183 [exp]	2.8	0.8371
AT2G15230		ATLIP1	lipase 1 (.1)		Lus10027861 [exp]	3.7	0.8501
AT3G27010	TCP	ATTCP20, PCF1, ...	ARABIDOPSIS THALIANA TEOSINTE ...		Lus10037046 [exp]	4.9	0.8037
AT5G53170		FTSH11	FTSH protease 11 (.1)		Lus10014930 [exp]	7.9	0.8404
AT1G06290		ATACX3, ACX3	acyl-CoA oxidase 3 (.1)		Lus10002177 [exp]	9.2	0.8365
AT3G24120	GARP		Homeodomain-like superfamily p...		Lus10039123 [exp]	9.4	0.7799
AT3G04590	AT-hook		AT hook motif DNA-binding fami...		Lus10006572 [exp]	10.0	0.7889
AT3G23280		XBAT35	XB3 ortholog 5 in Arabidopsis ...		Lus10009035 [exp]	12.2	0.7757
AT1G27290			unknown protein		Lus10037037 [exp]	13.0	0.7753

Compare expression of checked genes

Lus10002809 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.