Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36530 800 / 0 ENO2, LOS2 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) AT1G74030 592 / 0 ENO1 enolase 1 (.1) AT2G29560 489 / 4e-171 ENOC cytosolic enolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003374 [exp] 910 / 0 AT2G36530 799 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10035579 [exp] 846 / 0 AT2G36530 775 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10015028 [exp] 796 / 0 AT2G36530 802 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038904 [exp] 786 / 0 AT2G36530 792 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10008647 [exp] 755 / 0 AT2G36530 687 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10027255 [exp] 598 / 0 AT1G74030 799 / 0.0 enolase 1 (.1) Lus10038963 [exp] 597 / 0 AT1G74030 808 / 0.0 enolase 1 (.1) Lus10040711 [exp] 475 / 3e-165 AT2G29560 789 / 0.0 cytosolic enolase (.1) Lus10016447 [exp] 429 / 8e-147 AT2G29560 713 / 0.0 cytosolic enolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G116800 [exp] 838 / 0 AT2G36530 814 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.015G131100 [exp] 806 / 0 AT2G36530 811 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.012G057500 [exp] 586 / 0 AT1G74030 810 / 0.0 enolase 1 (.1) Potri.009G040700 [exp] 500 / 1e-175 AT2G29560 809 / 0.0 cytosolic enolase (.1) Potri.012G129300 [exp] 259 / 4e-85 AT2G36530 260 / 1e-85 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0227 [flax] [poplar] Enolase_N PF03952 [flax] [poplar] Enolase_N Enolase, N-terminal domain CL0256 [flax] [poplar] Enolase_TIM PF00113 [flax] [poplar] Enolase_C Enolase, C-terminal TIM barrel domain
Representative CDS sequence Show only first row Show all	>Lus10002844 pacid=23181319 polypeptide=Lus10002844 locus=Lus10002844.g ID=Lus10002844.BGIv1.0 annot-version=v1.0 ATGGCGATCACCATCGTTTCCGTCAAGGCTCGCCAGATCTTCGACAGTCGTGGCAACCCAACTGTGGAGACTGATATCAAGTTATCCGATGGTTATCTCG CAAGAGCCGCCGTTCCAAGTGGTGCTTCAACCGGTATCTACGAGGCTCTTGAGCTCAGGGATGGAGGATCGGAATACCTTGGAAAAGGTGTCTCTAAGGC CGTTGACAACGTGAACTCCATTATTGGCCCTGCCTTGATTGGCAAGGACCCTGCTGAGCAGACTGCTATTGATACCTTCATGGTTCAGCAACTTGATGGA ACTGTCAACGAGTGGGGATGGTGCAAGCAGAAGCTTGGAGCAAATGCCATTCTGGCTGTGTCTCTCGCTGTCTGCAAAGCTGGCGCTCACGCTAAGGGTA TCCCACTCTACAAGCACATTGCTAACCTTGCTGGCAACTCAAAGTTGGTGCTACCTGTTCCCGCTTTCAATGTCATCAACGGTGGATCGCATGCTGGAAA CAAATTGGCTATGCAGGCATGTTTCGAGTTCATGATTCTGCCTACTGGTGCTTCATCTTTCAAAGAAGCCATGAAGATTGGTGCTGAAGTCTACCACAAC TTGAAGTCTGTGATTAAGAAGAAGTACGGTCAGGATGCAACCAATGTCGGTGACGAAGGTGGCTTTGCACCTAACATTCAGGAAAACAAGGAAGGGCTCG AGTTGCTCAAGACTGCCATTGCTAAAGCCGGTTATACCGACAAGGTTGTTATCGGGATGGATGTTGCTGCATCTGAGTTTTATGGCTCAGACAAGAGCTA TGACCTGAACTTCAAGGAGGAGAACAATGACGGTAAAGCAAAGATCTCTGGCGAAGCCCTCAAGGATCTTTACAAGTCATTCATAGCCGAGTATCCTATT TCCTCTATCGAGGATCCCTTTGACCAAGACGACTGGGAACACTATAGCAAGATGACCAGTGAGATCGGAGAGAAAGTACAGATTGTTGGGGACGATCTCT TGGTCACAAACCCCAAGAGGGTTGAGAAGGCCATCAAGGAGAAGTCTTGCAATGCTCTCCTCCTGAAGGTTAACCAAATCGGTACAGTGACCGAGAGTAT CGAAGCTGTGAAAATGTCTAAGCGTGCTGGATGGGGAGTGATGGCCAGCCACCGCAGTGGTGAAACCGAGGATACCTTCATTGCTGATTTATCCGTCGGT CTATCCACGGGTCAAATCAAGACCGGAGCTCCTTGCAGATCTGAGCGTCTTGCCAAGTACAACCAGCTTTTGAGGATTGAGGAAGAGCTGGGATCTGAAG CAGTTTATGCAGGAGTGAACTTCAGGACACCTGTCGAGCCGTACTAG
AA sequence Show only first row Show all	>Lus10002844 pacid=23181319 polypeptide=Lus10002844 locus=Lus10002844.g ID=Lus10002844.BGIv1.0 annot-version=v1.0 MAITIVSVKARQIFDSRGNPTVETDIKLSDGYLARAAVPSGASTGIYEALELRDGGSEYLGKGVSKAVDNVNSIIGPALIGKDPAEQTAIDTFMVQQLDG TVNEWGWCKQKLGANAILAVSLAVCKAGAHAKGIPLYKHIANLAGNSKLVLPVPAFNVINGGSHAGNKLAMQACFEFMILPTGASSFKEAMKIGAEVYHN LKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTDKVVIGMDVAASEFYGSDKSYDLNFKEENNDGKAKISGEALKDLYKSFIAEYPI SSIEDPFDQDDWEHYSKMTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQIGTVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVG LSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGVNFRTPVEPY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10002844 [exp]	0	1
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10003374 [exp]	1.0	0.9802
AT2G20760			Clathrin light chain protein (...		Lus10018480 [exp]	2.4	0.9409
AT1G74030		ENO1	enolase 1 (.1)		Lus10038963 [exp]	3.7	0.9359
AT5G08680			ATP synthase alpha/beta family...		Lus10035263 [exp]	4.0	0.9430
AT2G32380			Transmembrane protein 97, pred...		Lus10027174 [exp]	4.5	0.9388
AT1G29150		RPN6, ATS9	REGULATORY PARTICLE NON-ATPASE...		Lus10036805 [exp]	4.5	0.9306
AT5G43330		c-NAD-MDH2	cytosolic-NAD-dependent malate...		Lus10021870 [exp]	5.0	0.9384
AT2G47470		ATPDI11, ATPDIL...	UNFERTILIZED EMBRYO SAC 5, MAT...		Lus10036337 [exp]	5.1	0.9201
AT1G59900		AT-E1 ALPHA, AT...	pyruvate dehydrogenase complex...		Lus10030820 [exp]	5.2	0.9308
AT4G39220		ATRER1A	Rer1 family protein (.1)		Lus10019323 [exp]	5.7	0.9268

Compare expression of checked genes

Lus10002844 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.