Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G38360 296 / 7e-97 LAZ1 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) AT1G77220 170 / 3e-48 Protein of unknown function (DUF300) (.1) AT1G23070 119 / 3e-30 Protein of unknown function (DUF300) (.1) AT5G26740 49 / 2e-06 Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2), Protein of unknown function (DUF300) (.3) AT3G05940 48 / 5e-06 Protein of unknown function (DUF300) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022626 [exp] 335 / 3e-116 AT4G38360 319 / 2e-108 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Lus10022625 [exp] 313 / 1e-107 AT4G38360 296 / 7e-102 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Lus10018920 [exp] 257 / 2e-82 AT1G77220 316 / 5e-104 Protein of unknown function (DUF300) (.1) Lus10028621 [exp] 251 / 1e-79 AT1G77220 316 / 2e-103 Protein of unknown function (DUF300) (.1) Lus10035832 [exp] 183 / 1e-54 AT1G23070 205 / 6e-63 Protein of unknown function (DUF300) (.1) Lus10036614 [exp] 135 / 4e-37 AT1G23070 184 / 2e-55 Protein of unknown function (DUF300) (.1) Lus10001058 [exp] 51 / 9e-07 AT3G05940 675 / 0.0 Protein of unknown function (DUF300) (.1) Lus10001426 [exp] 51 / 9e-07 AT3G05940 674 / 0.0 Protein of unknown function (DUF300) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G165600 [exp] 267 / 3e-85 AT4G38360 717 / 0.0 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Potri.004G204600 [exp] 259 / 2e-82 AT4G38360 713 / 0.0 LAZARUS 1, Protein of unknown function (DUF300) (.1), Protein of unknown function (DUF300) (.2) Potri.002G071400 [exp] 167 / 3e-47 AT1G77220 753 / 0.0 Protein of unknown function (DUF300) (.1) Potri.005G188200 [exp] 166 / 8e-47 AT1G77220 756 / 0.0 Protein of unknown function (DUF300) (.1) Potri.018G062600 [exp] 132 / 7e-35 AT1G23070 522 / 0.0 Protein of unknown function (DUF300) (.1) Potri.005G000600 [exp] 52 / 3e-07 AT3G05940 622 / 0.0 Protein of unknown function (DUF300) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03619 [flax] [poplar] Solute_trans_a Organic solute transporter Ostalpha
Representative CDS sequence Show only first row Show all	>Lus10003321 pacid=23148039 polypeptide=Lus10003321 locus=Lus10003321.g ID=Lus10003321.BGIv1.0 annot-version=v1.0 ATGAGGCATCTCGGGGATCTCTTATCCTATTTGGGTTACTCGCCACCAATATGGGCGTCTTTGATTGGTGGTGCTTTCATGGCGCTAAGCCTCTCATTGT CTTGCTACCTCTTGCTCGAACACCTCTCTGCTTACAAGAATCCTGAGGAGCAGAAGTTTTTGATTGGGGTTATTGTTATGGTTCCCTTTTATGCCATCGA ATCTTTTATATCGTTGGTGCATCCATCAATAAGTGTTGATGTTGGAATCTTAAGGGATTGCTATGAGTCATTTGCCATGTATTGCTTTGGGAGGTACCTT GTTGCTTGCTTAGGCGGAGAAGAAAGAGCAATTGAGTTCATGGAGAGGCAAGGGCGTGCTAGCACGAAGACTCCGCTTCTAGAACATAAAAAAGACAAGG GAACCGTGAAGCACCCTTTCCCGATGAATTACTTCTTAAAGCCATGGCGACTTGGTCGGTGGTTCTATCAAATTGTGAAGTTTGGCATTGTTCAATATAT GGGCATTGCTTCTGCTGTCCATCTATATGTGTTCCCAGCGAAGCCATATGCCCTAATGGGAGATCGTTTCACCGGAACGATCTCAGTCCTTGGAGACTAT GCTTCGGTCGATTGCCCTATAGATCCTGACGAGGTCAGGGACAGCGAACGCCCCACAAAACTACGGCTCCCTCAGCCCGACGAAGATGTCAGGAGCGGAA TGACACTCAAGGAAAGTGTCCGGGATGTTGTTGTTGGTGGCGGTGGATTCATAGTGAAAGATGTGAAGTTCACAGTGACACAAGCAGTGGAGCCAGTGGA AAAGGGCATCACGAAGTTCAACGAGAAACTACACAAGATCTCCGAAAACATGAGGAAGGACAAGGACAAGAAGAGAACGAAGGACGATAGCTGTTTAACT TCGTCTCCACGAAGAGTTATTCGTGGTATAGATGACCCTCTTCTGAATGGAAGCCTTAGTGACAACAGTGGAGCAATTAGAACGAAGAAGCATCGTCGAA AATCAGACTATAACAGTGGCGAAAGTGGGGGAGAAAGTAGCAGTGATCAGAACTATGGTGGATATCAGGTCAGGGGACGTCGGTGGATAACTAAAGAGTA A
AA sequence Show only first row Show all	>Lus10003321 pacid=23148039 polypeptide=Lus10003321 locus=Lus10003321.g ID=Lus10003321.BGIv1.0 annot-version=v1.0 MRHLGDLLSYLGYSPPIWASLIGGAFMALSLSLSCYLLLEHLSAYKNPEEQKFLIGVIVMVPFYAIESFISLVHPSISVDVGILRDCYESFAMYCFGRYL VACLGGEERAIEFMERQGRASTKTPLLEHKKDKGTVKHPFPMNYFLKPWRLGRWFYQIVKFGIVQYMGIASAVHLYVFPAKPYALMGDRFTGTISVLGDY ASVDCPIDPDEVRDSERPTKLRLPQPDEDVRSGMTLKESVRDVVVGGGGFIVKDVKFTVTQAVEPVEKGITKFNEKLHKISENMRKDKDKKRTKDDSCLT SSPRRVIRGIDDPLLNGSLSDNSGAIRTKKHRRKSDYNSGESGGESSSDQNYGGYQVRGRRWITKE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G38360		LAZ1	LAZARUS 1, Protein of unknown ...		Lus10003321 [exp]	0	1
AT4G38360		LAZ1	LAZARUS 1, Protein of unknown ...		Lus10022626 [exp]	1.4	0.9356
AT4G35110			Arabidopsis phospholipase-like...		Lus10042396 [exp]	2.0	0.9491
AT3G18820		RAB71, AtRABG3f...	RAB GTPase homolog G3F (.1)		Lus10042328 [exp]	4.2	0.9214
AT1G34750			Protein phosphatase 2C family ...		Lus10020924 [exp]	4.5	0.9175
AT4G38060			unknown protein		Lus10001865 [exp]	6.5	0.9054
AT5G41990		EIP1, ATWNK8, W...	EMF1-Interacting Protein 1, wi...		Lus10017318 [exp]	7.7	0.9107
AT3G62420	bZIP	ATBZIP53	basic region/leucine zipper mo...		Lus10010005 [exp]	9.4	0.9290
AT2G10950			BSD domain-containing protein ...		Lus10039982 [exp]	11.7	0.9304
AT4G39870			TLD-domain containing nucleola...		Lus10041697 [exp]	13.2	0.9224
AT3G48140			B12D protein (.1)		Lus10004241 [exp]	14.9	0.9093

Compare expression of checked genes

Lus10003321 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.