Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G34520 106 / 2e-28 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34490 102 / 6e-27 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55350 102 / 1e-26 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34500 101 / 2e-26 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT3G51970 101 / 2e-26 ATASAT1, ASAT1, ATSAT1 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) AT5G55380 101 / 3e-26 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55340 100 / 6e-26 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55370 99 / 2e-25 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55330 99 / 2e-25 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55360 99 / 3e-25 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022293 [exp] 176 / 4e-57 AT5G55340 178 / 2e-55 MBOAT (membrane bound O-acyl transferase) family protein (.1) Lus10039576 [exp] 112 / 3e-30 AT3G51970 329 / 7e-112 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G055100 [exp] 128 / 2e-36 AT3G51970 330 / 8e-112 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.009G054900 [exp] 125 / 3e-35 AT3G51970 280 / 1e-92 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014700 [exp] 124 / 1e-34 AT5G55340 242 / 1e-77 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.001G106800 [exp] 118 / 2e-32 AT3G51970 255 / 1e-82 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014600 [exp] 118 / 2e-32 AT3G51970 299 / 1e-99 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.006G009800 [exp] 114 / 4e-31 AT3G51970 244 / 3e-78 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.008G145700 [exp] 109 / 3e-29 AT5G55340 264 / 1e-86 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.009G055000 [exp] 107 / 1e-28 AT3G51970 314 / 7e-106 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.001G260700 [exp] 103 / 5e-27 AT3G51970 268 / 2e-87 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.006G009600 [exp] 89 / 6e-22 AT5G55360 145 / 3e-41 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0517 [flax] [poplar] MBOAT-like PF03062 [flax] [poplar] MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence Show only first row Show all	>Lus10003655 pacid=23171432 polypeptide=Lus10003655 locus=Lus10003655.g ID=Lus10003655.BGIv1.0 annot-version=v1.0 ATGCATCCCCACTTCGTCTTCGCCCTCTATTGCCTACACTTGTATCTCGAATTAGAACTCGTTCTCGCTCTGTGCACGGTCCCGGCTCGAGCTCTGTTTG GGTTCGAGCTGAAGCCTCAGTTCGACGAGCTGTATCTCTCCACGTCACTTCAGGACTTTTCGGGGCGGAGGTGGAATCTGATGCTCACCAAGATATTGCG TCCCACCGTCTACGTTCCGATCAGAGGAGTGGCGGGGCGTGTAGTGGGTGGGCAGTGGGCTTCGCTGTCGGCGGTGGTGGCCACGTTCGTGGTGTCGCGG TTAATGCACGAATTGATGTATTACTATATGAATAGGGTGGGGCCCACATGGGAGGTGGCGTGGTTTTTCGTGGAGTTTGCGTGGCTATGGAAGTGGGGGT TAAGAAGAAATTTAAAGAGAAAGCATTTTGGTTGCCGTCGGTGA
AA sequence Show only first row Show all	>Lus10003655 pacid=23171432 polypeptide=Lus10003655 locus=Lus10003655.g ID=Lus10003655.BGIv1.0 annot-version=v1.0 MHPHFVFALYCLHLYLELELVLALCTVPARALFGFELKPQFDELYLSTSLQDFSGRRWNLMLTKILRPTVYVPIRGVAGRVVGGQWASLSAVVATFVVSR LMHELMYYYMNRVGPTWEVAWFFVEFAWLWKWGLRRNLKRKHFGCRR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G55380			MBOAT (membrane bound O-acyl t...		Lus10003655 [exp]	0	1
					Lus10039535 [exp]	15.0	0.5836
AT5G50790		SWEET10, AtSWEE...	Nodulin MtN3 family protein (....		Lus10022436 [exp]	20.8	0.6141
AT1G72770		HAB1	HYPERSENSITIVE TO ABA1, homolo...		Lus10034965 [exp]	38.1	0.5636
AT1G71960		ATABCG25, ABCG2...	Arabidopsis thaliana ATP-bindi...		Lus10006046 [exp]	38.2	0.5026
AT1G15780			unknown protein		Lus10025449 [exp]	51.1	0.5012
AT1G11910		ATAPA1, APA1	aspartic proteinase A1 (.1)		Lus10030041 [exp]	76.8	0.4974
AT1G26480		GF14IOTA, GRF12	general regulatory factor 12 (...		Lus10037090 [exp]	89.1	0.4997
AT3G09600	MYB	LCL5 (LHY-CCA1-...	REVEILLE 8, LHY-CCA1-LIKE5, Ho...		Lus10019902 [exp]	157.8	0.4678
AT4G38960	CO		B-box type zinc finger family ...		Lus10031087 [exp]	172.5	0.4452
AT1G01060	MYB	LHY, LHY1	LATE ELONGATED HYPOCOTYL 1, LA...		Lus10005134 [exp]	213.0	0.4369

Compare expression of checked genes

Lus10003655 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.