Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43950 434 / 5e-153 OEP37, ATOEP37 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013621 [exp] 616 / 0 AT2G43950 432 / 3e-152 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G144900 [exp] 491 / 1e-175 AT2G43950 397 / 9e-139 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3) Potri.017G007300 [exp] 474 / 5e-169 AT2G43950 388 / 3e-135 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10003862 pacid=23163344 polypeptide=Lus10003862 locus=Lus10003862.g ID=Lus10003862.BGIv1.0 annot-version=v1.0 ATGGCAGATTCTTCAAGGACCGCCTCTCCTCCTAATCCTCCGCCTAAGTCTCCCGGGTCACTCTCCATTACCCCTAGTCACGGCTCCCCCTATGTCCCAC CTTCAGATCCTTCACCGGCCTCTCAATTTCCACCACAGCCGTCGCCGCCATCTGGCACTGATGTTCCTCCAAAGCCGCTGCCGCTATTTGTCTCAGTATT ATCCAAAAGACCTTCCTTTAGAGTGACTACTGAGTTTGACAGCGACAGCTCAGTGTTCTTTCAGAAGGTCTCCTGCAAGCTGCTGGACAGCTTCGCCAAG CTCAAGCTCACCTTTCAGAACAACGGCAAAGGGGAAGTTTCTGAGCCTCAGATTTCTCTCCTCTCCAAAGTTCTTTCTATTCATTACGATGTTGAGGAGC AGAATGCGCTTGTTAAGACCTCATTTGACGTCGGTTCAAGGCTTCATTTCAAGAGCTTCCACGATGTCAAGGCACAACAAGGAGAAGTTGCAGTTGTCAC TAAATTTGCTGAGCCTGGCTACGCTCTTGAGCTCTCATCTCCTGTTCCTGCTGTTGGTTTGCCTAGAGCAACTCTTAAATTCCCTTTCGGTGAAGTTTCA CTAGAGGAGGGTGAGATTGCAGAAGAAAAGCGAACACTTTCAATTAGTGGACTTGGTAAAGCTCAGGTGTTGAATGGGCTTTGCTCTGCAACCTACAGTG AAGAGGAGTTGAAACTAAGATATTTGTATAAGGATGAGGCACTTTCGTTTATTCCGAGCATTTCACTGCCTTCTAATGCTTTGTCATTTGCATTCAAGCG TCGGTTTAATCCTTCTAATAAGTTAAGCTACTGGTATAATTTCGATTCCAACAACTGGAGTGCTGTGTACAAGCACACATACGGCAAGGATATCAAGTTG AAAACCGGTTATGATTCAGAAGTGCGACTTGGCTGGGCATCACTCTGGGTTGGGGATGAAGGTGGTAAGGCGAAAACTGCACCAATGAAGATGAAAGTGC AGTTTATGCTTCAAGTGCCGCAGGATGACATTAAATCTTCAGCATTGATGTTCCGTGTTAAAAAGCGATGGGACATATAG
AA sequence Show only first row Show all	>Lus10003862 pacid=23163344 polypeptide=Lus10003862 locus=Lus10003862.g ID=Lus10003862.BGIv1.0 annot-version=v1.0 MADSSRTASPPNPPPKSPGSLSITPSHGSPYVPPSDPSPASQFPPQPSPPSGTDVPPKPLPLFVSVLSKRPSFRVTTEFDSDSSVFFQKVSCKLLDSFAK LKLTFQNNGKGEVSEPQISLLSKVLSIHYDVEEQNALVKTSFDVGSRLHFKSFHDVKAQQGEVAVVTKFAEPGYALELSSPVPAVGLPRATLKFPFGEVS LEEGEIAEEKRTLSISGLGKAQVLNGLCSATYSEEELKLRYLYKDEALSFIPSISLPSNALSFAFKRRFNPSNKLSYWYNFDSNNWSAVYKHTYGKDIKL KTGYDSEVRLGWASLWVGDEGGKAKTAPMKMKVQFMLQVPQDDIKSSALMFRVKKRWDI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43950		OEP37, ATOEP37	ARABIDOPSIS CHLOROPLAST OUTER ...		Lus10003862 [exp]	0	1
AT4G36910		CBSX1, CDCP2, L...	LOSS OF THE TIMING OF ET AND J...		Lus10041576 [exp]	4.0	0.8175
AT5G27870			Plant invertase/pectin methyle...		Lus10020313 [exp]	9.4	0.7676
AT4G23330			unknown protein		Lus10024630 [exp]	14.3	0.7115
AT1G18440			Peptidyl-tRNA hydrolase family...		Lus10042977 [exp]	15.7	0.7233
AT3G04310			unknown protein		Lus10004401 [exp]	21.2	0.8067
					Lus10026124 [exp]	21.4	0.7382
AT4G21720			unknown protein		Lus10017512 [exp]	24.7	0.7271
AT1G43580			Sphingomyelin synthetase famil...		Lus10028111 [exp]	27.5	0.7765
AT1G80700			unknown protein		Lus10026096 [exp]	27.9	0.7550
AT1G18720			Protein of unknown function (D...		Lus10021661 [exp]	30.0	0.7557

Compare expression of checked genes

Lus10003862 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.