Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10004091 pacid=23147811 polypeptide=Lus10004091 locus=Lus10004091.g ID=Lus10004091.BGIv1.0 annot-version=v1.0 ATGGAGTCCTTAGAACGAGGATCGGAATCCGAATCGGAGGCGGCGGCGGGGGAGGAGGGGGAAGAAGAAGAGATGGCAGAAGAGGAGGAAGAAAGCGGGT ATAGAAGTAGGTCGAGGAGTATTAATTACATAATTAGGCAGCCGAGTTCGAGTAATGGATTTGGCGGGAGTGATTATTTGGGGAGTTTTAAGAAGAAGAG GAAGAGAGGAGGAGGTGGAGTGGGGAGGAATGGGGGAAAGAATGGTGTAGCGGCGGCGATGGTGTTGGCGGAGGAGATAAGGTCGTTTGCAGGGAAGATG TTGGGGATGGAGAAGAAGAAGATGGAGATGGTGAAGGAAATGGAGAAGGTGAGAATGGAGATGGAGAATAAGAGGATGGTTATGATTTTGGATGCCGAGA AGAGGATCATTCAGAGTATTCAAACTGCTTTTGGTGGAACACAGGAGGTGGAGGAAGAAGAAGACGATGAGAAATGA
AA sequence Show only first row Show all	>Lus10004091 pacid=23147811 polypeptide=Lus10004091 locus=Lus10004091.g ID=Lus10004091.BGIv1.0 annot-version=v1.0 MESLERGSESESEAAAGEEGEEEEMAEEEEESGYRSRSRSINYIIRQPSSSNGFGGSDYLGSFKKKRKRGGGGVGRNGGKNGVAAAMVLAEEIRSFAGKM LGMEKKKMEMVKEMEKVRMEMENKRMVMILDAEKRIIQSIQTAFGGTQEVEEEEDDEK

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G24860	Trihelix		Homeodomain-like superfamily p...		Lus10004091 [exp]	0	1
AT1G47710			Serine protease inhibitor (SER...		Lus10034364 [exp]	7.0	0.7569
AT4G10620			P-loop containing nucleoside t...		Lus10000122 [exp]	7.4	0.6841
AT1G45616		AtRLP6	receptor like protein 6 (.1)		Lus10003389 [exp]	9.9	0.6891
AT3G63090			Ubiquitin carboxyl-terminal hy...		Lus10000098 [exp]	14.1	0.6403
AT2G19130			S-locus lectin protein kinase ...		Lus10004283 [exp]	18.7	0.6760
AT3G10300			Calcium-binding EF-hand family...		Lus10031049 [exp]	21.6	0.7103
AT3G63090			Ubiquitin carboxyl-terminal hy...		Lus10012374 [exp]	21.9	0.6562
AT2G42760			unknown protein		Lus10007299 [exp]	24.9	0.6854
AT1G14870		AtPCR2, PCR2	PLANT CADMIUM RESISTANCE 2 (.1...		Lus10041474 [exp]	30.4	0.5997
					Lus10032433 [exp]	35.2	0.6705

Compare expression of checked genes

Lus10004091 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.