Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G44190 140 / 5e-41 FAD/NAD(P)-binding oxidoreductase family protein (.1) AT5G22140 136 / 5e-40 FAD/NAD(P)-binding oxidoreductase family protein (.1), FAD/NAD(P)-binding oxidoreductase family protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013339 [exp] 143 / 8e-42 AT3G44190 497 / 6e-177 FAD/NAD(P)-binding oxidoreductase family protein (.1) Lus10001856 [exp] 140 / 7e-41 AT3G44190 506 / 1e-180 FAD/NAD(P)-binding oxidoreductase family protein (.1) Lus10008365 [exp] 114 / 2e-31 AT3G44190 305 / 9e-103 FAD/NAD(P)-binding oxidoreductase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G217800 [exp] 141 / 2e-41 AT3G44190 536 / 0.0 FAD/NAD(P)-binding oxidoreductase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10004789 pacid=23168927 polypeptide=Lus10004789 locus=Lus10004789.g ID=Lus10004789.BGIv1.0 annot-version=v1.0 ATGGTTGATAAATATATCAAGATTAAAGGCAGACACAACATCTTTGCAATCGGAGATATTACCGATGTTCCCGAGCTGAAGCACGAATATCTGGCACAAA ACCATGCGTCAGTGGTGGCAAAAAACCTCAAGGTAATTCTCAACGGAGGAAGAGAGTGCAGAAAGAGTAAGTACAAGCCAGGATCAGAGATAGCAATCGT ATCACTTGGCAGAATGGAAGCGGTGGCACCGTTTCCATTCACGACAGTGAGTGGCATTCATCCAGGATTTATTAAATTGGAAGACTTGCTTGTCGGAAAA AAAGCTAATGGGATTAGACCCCAATGTTGTAGAGCATTAAATGGAAACAACTTTAGATTCATCAACCAGCTGTATTTATCCTACATCGTAATCAAGTTCT TAAGGATAATGGACTCATGGTCGGTATTTTATGCGGGAGGGAATGCGATGTTATGA
AA sequence Show only first row Show all	>Lus10004789 pacid=23168927 polypeptide=Lus10004789 locus=Lus10004789.g ID=Lus10004789.BGIv1.0 annot-version=v1.0 MVDKYIKIKGRHNIFAIGDITDVPELKHEYLAQNHASVVAKNLKVILNGGRECRKSKYKPGSEIAIVSLGRMEAVAPFPFTTVSGIHPGFIKLEDLLVGK KANGIRPQCCRALNGNNFRFINQLYLSYIVIKFLRIMDSWSVFYAGGNAML

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G44190			FAD/NAD(P)-binding oxidoreduct...		Lus10004789 [exp]	0	1

Compare expression of checked genes

Lus10004789 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.