Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G02090 546 / 0 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G16480 105 / 2e-25 MPPALPHA mitochondrial processing peptidase alpha subunit (.1) AT1G51980 105 / 3e-25 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004939 [exp] 642 / 0 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 641 / 0 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 640 / 0 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10025839 [exp] 114 / 3e-28 AT1G51980 643 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10038262 [exp] 114 / 4e-28 AT1G51980 637 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10035000 [exp] 102 / 5e-24 AT1G51980 631 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10012926 [exp] 99 / 1e-22 AT3G16480 504 / 3e-173 mitochondrial processing peptidase alpha subunit (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G092400 [exp] 556 / 0 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.004G118900 [exp] 543 / 0 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.001G191100 [exp] 122 / 2e-31 AT1G51980 620 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.008G193200 [exp] 108 / 2e-26 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.010G036700 [exp] 96 / 9e-22 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10004938 pacid=23177754 polypeptide=Lus10004938 locus=Lus10004938.g ID=Lus10004938.BGIv1.0 annot-version=v1.0 ATGGAAGAGGTTGAAGGACAGACTGAAGAAGTCATCTTTGATCACTTGCATGCCACTGCTTTCCAGTACACTCCTTTGGGTCGCACTATTCTTGGCCCCG CTAAAAATATTAAGACAATTACCAGAGATAACCTTCAGAGCTATATCAAGACACACTATACAGCTCCCAGAATGGTAATTGCTGCTTCTGGAGCTGTCAA ACATGAGGATATAGTTGATCAAGCAAAGAAGCTGTTTACCAATCTGTCATCTGAACCAACTACTGCTTCACAGTTAGTGTCAAAAGAACCTGCATTTTTC ACTGGTTCTGAGGTTAGGATAATCGATGATGACCTCCCTCTGGCACAATTTGCCGTTGCTTTTGAAGGTGCTTCATGGACAGATCCCGATTCTGTAGCTC TTATGGTCGTGCAGTCTATGTTAGGTTCATGGAACAAAAGTGCTGGTGGTGGCAAGCACATGGGTTCTGAGCTGGTACAGAGGGTTAGTGTAAATGAGCT TGCTGAAAGTGTAATGGCTTTCAATACTAACTACAAAGACACTGGACTGTTTGGTGTTTATGCAGTAGCCAAGCCCGAGGATTTGGATGATTTGACCTAT GCAATCATGTATGAGATTGCCAAGTTGTCTTTCCGAGTTTCAGAAGATGATGTGATCCGTGCTCGAAATCAGTTGAAGTCATCCTTACTGCTTCATATGG ATGGAACTAGTCCTGTAGCTGAAGATATTGGGCGCCAGCTGCTCACTTACGGACGAAGAATTCCGTCAGCGGAGTTATTTGCAAGGATAGATGCAGTCGA TGCAAGCACCATTAAACGTGTGGCAAACCGTTTTATTTATGACAAGGATGTTGCTATTGCTGCGATGGGTCCCATTCAAGGATTGCGAGACTACAACTGG TTCAGACGCAGAACCTACTTCCTCCGCTACTAA
AA sequence Show only first row Show all	>Lus10004938 pacid=23177754 polypeptide=Lus10004938 locus=Lus10004938.g ID=Lus10004938.BGIv1.0 annot-version=v1.0 MEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAKNIKTITRDNLQSYIKTHYTAPRMVIAASGAVKHEDIVDQAKKLFTNLSSEPTTASQLVSKEPAFF TGSEVRIIDDDLPLAQFAVAFEGASWTDPDSVALMVVQSMLGSWNKSAGGGKHMGSELVQRVSVNELAESVMAFNTNYKDTGLFGVYAVAKPEDLDDLTY AIMYEIAKLSFRVSEDDVIRARNQLKSSLLLHMDGTSPVAEDIGRQLLTYGRRIPSAELFARIDAVDASTIKRVANRFIYDKDVAIAAMGPIQGLRDYNW FRRRTYFLRY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G02090		MPPBETA	Insulinase (Peptidase family M...		Lus10004938 [exp]	0	1
AT5G03290		IDH-V	isocitrate dehydrogenase V (.1...		Lus10023192 [exp]	2.2	0.9610
AT5G08680			ATP synthase alpha/beta family...		Lus10034631 [exp]	2.2	0.9691
AT5G08300			Succinyl-CoA ligase, alpha sub...		Lus10040992 [exp]	2.4	0.9656
AT2G36460			Aldolase superfamily protein (...		Lus10023870 [exp]	3.2	0.9658
AT5G51830			pfkB-like carbohydrate kinase ...		Lus10027401 [exp]	4.0	0.9651
AT3G02090		MPPBETA	Insulinase (Peptidase family M...		Lus10040885 [exp]	4.2	0.9547
AT3G62120			Class II aaRS and biotin synth...		Lus10016281 [exp]	4.9	0.9559
AT2G20420			ATP citrate lyase (ACL) family...		Lus10008238 [exp]	6.2	0.9525
AT3G04120		GAPC1, GAPC-1, ...	glyceraldehyde-3-phosphate deh...		Lus10036976 [exp]	6.5	0.9552
AT1G70770			Protein of unknown function DU...		Lus10001593 [exp]	7.7	0.9542

Compare expression of checked genes

Lus10004938 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.