Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G02260 3274 / 0 CRM1, TIR3, LPR1, DOC1, ASA1, UMB1, BIG UMBRELLA 1, TRANSPORT INHIBITOR RESPONSE 3, LOW PHOSPHATE-RESISTANT ROOT 1, DARK OVER-EXPRESSION OF CAB 1, CORYMBOSA1, ATTENUATED SHADE AVOIDANCE 1, auxin transport protein (BIG) (.1) AT1G16710 51 / 3e-05 HAC12 histone acetyltransferase of the CBP family 12 (.1.2) AT1G55970 50 / 5e-05 HAG4, HAG04, HAC6, HAC04, HAC4 ,ATHPCAT2 HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6, histone acetyltransferase of the CBP family 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034360 [exp] 5738 / 0 AT3G02260 5990 / 0.0 UMBRELLA 1, TRANSPORT INHIBITOR RESPONSE 3, LOW PHOSPHATE-RESISTANT ROOT 1, DARK OVER-EXPRESSION OF CAB 1, CORYMBOSA1, ATTENUATED SHADE AVOIDANCE 1, auxin transport protein (BIG) (.1) Lus10000087 [exp] 147 / 2e-40 AT3G02260 57 / 4e-10 UMBRELLA 1, TRANSPORT INHIBITOR RESPONSE 3, LOW PHOSPHATE-RESISTANT ROOT 1, DARK OVER-EXPRESSION OF CAB 1, CORYMBOSA1, ATTENUATED SHADE AVOIDANCE 1, auxin transport protein (BIG) (.1) Lus10033321 [exp] 56 / 1e-06 AT1G79000 1965 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Lus10034780 [exp] 56 / 1e-06 AT1G79000 1715 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Lus10033319 [exp] 53 / 7e-06 AT1G79000 1952 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G101100 [exp] 4100 / 0 AT3G02260 6576 / 0.0 UMBRELLA 1, TRANSPORT INHIBITOR RESPONSE 3, LOW PHOSPHATE-RESISTANT ROOT 1, DARK OVER-EXPRESSION OF CAB 1, CORYMBOSA1, ATTENUATED SHADE AVOIDANCE 1, auxin transport protein (BIG) (.1) Potri.007G003400 [exp] 47 / 0.0005 AT1G79000 1847 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0006 [flax] [poplar] C1 PF00569 [flax] [poplar] ZZ Zinc finger, ZZ type
Representative CDS sequence Show only first row Show all	>Lus10005090 pacid=23171479 polypeptide=Lus10005090 locus=Lus10005090.g ID=Lus10005090.BGIv1.0 annot-version=v1.0 ATGGAAGACCACTTGACCAAGCTCCACCGATGTCTTTTCGAATCCAACACTTCGCCGACGGATTTCTTTCACTCTCTCCGCTCCGACGCTTCCATCGCCA TCGCCCTTCAGCAATTCTACTTAATTCTCAAGCGAGGAGTCTCCGTCGTCGACGCAGATGATGTTGATGGCAAGAGATTAGGGTTCCAGTTGTGGACCGA TTCACAGATCCAAGCTGTTGTATCATTCGGCCTCGCGATCGTTTCCGCTTCTAGATCTCTTTCAGGTATCTTAGCTGATAGAAACAGTGCGTTAAGTACT TGCTTCCAACTTGGAGAGTTCACTTTGGAGGCTCTTTTTTATCTAAACCAAGCAGAGCCCGTGTTGATCGCTGTTGTGCAACAATTACTGGAGTTCGGCG TCTGTTTCTTGGAAAATTCACTGTTTTCCAACGATGAATCAAGTACACAGATGAATACAGTACTACTTATGGAACTGGCTTTGGTCAAAGGAATAGATAA ATTACCTGACCAGTCTTGCTCTCTGAAGTGCATGTTAGAGTTGTTGCCAGTGGTATCTGGTAGTTTTTACGATGTTCAGTTTGATATGCACATGAGATGC AGTCTCCAAGGGTTTAGTTGCTTGAGGGGGGAGAAACAGGTGGACCGACTACTAATGACGTTAGCAACAAAGTCTACTCAACCCGAGGGGCAGATTTCTG GCCTGGATGGATCCACACATGCTATGAGTAATTTGAGTTTTGCTTCTCAGCATTGGATTGTCATCCATGTGGATTGCGTTCAGCGTCTTATCCCTTACTG CAAACAGCTGATTGAGTTGGCAGATGTTCATGGTGAGAAATGGGCCAGTACTGATTTTGCTGGGAGGCTTTCCTTCAGTTTGAGAATTCTAAGGTTACTC AGGAGCCTTGTGATTGAGAGTCCATATATTGAGTATGACGAGTCACTGTTGGAGCAAGTTGCTTCATTAGCTGATACAATACCTATTATATTTAGACAAA ACCTTGAATTTGTAAACAAGCAAGGTGTTGTGGAGAGCGATTTTGAGAGCCTTGCAATATCTCTAGTGGAAGAGTTTCTCCATCTTGTCGGATTAATTTT CTGCAACAGCAGTGTCCCTCAAAACATTAAAGTGTGTATTGTGGCTTCTATATTGGACAACTTGGATTCTTCTGCATGGACACACGACAAGTCTGCAGCC ATTGTAAAGCCTCCCCTGGTATATTTTCCTCGAACCATATTCCTCATTTTAGGAATTATTGAAGATGTTAGAAGAGAAAAATGTCAGGAACTTGACAGGA AGTTGACCAGCAGCTCTTCAGAATTGCCAAACATTTCTCAGTCATGCCATTTGCACTGCAAGGAAGTTCCTTTGGTCAATGGGTTTACAGTTGAGGAATC ATTGAGAGTTATTTTCTCTTCATCAGTTAAATGGCTGGATAATGTAATGCATCTTATTCTATTCCTTCAATGGGAAGGTACGAAGTTCAGACCAAAACTT GAAAAGTCACAGTCCAGCTGTCTCAAAGCTAGTTGTGTAGTTGAAGTGGACAATGCAGCGTGCCATGAAGATGAAGCTCTTTTTGGTAACCTCTTCTCTG AAGGCTGTCGCTCGGTAGGATCGGCGGAAGTTTATGACCAGCCACAAGTTGTCGGCTCTTGTTCCAACAATTGCAATATGCCAATGCAAGCAGCCAGTGA GTTGTTGGGCTTTCTTAAAGATGTTGTTTTTTCCCAGGAGTATCGTACTCTTTATGAGGATGGTTGTAGAATGATAAGGGAGAATCATATAATTTCTATG CTCTCGCTTCTCAACTATCAGGATTTAGAAGATAAGTCATTTGATGGGTTCTCTTCTTCCCTAGATGAGAGAAAGACTTGGGGTGTCCATGAACTTTGCT TTGAGATTTTAGGCAAGCTGCTCAATCAACGTGCTCTATCAGCTTCCCTTGAAGAGTGTCTTGTTGATCAAATTTTAATTGTTGAAAATGGTGCTTTTGC TTACAGTGATCGAGCTCTAATGTTGCTGGTTAACGCCCTTTTTGCTAGAGCTGGTCCTGATGGTGGCCGATTAAGAACCAGACTGTACGAAGGGTTTGTG GCCTTCATTACTGATAGAATAAAAAATGTTTGTTCAGAGTGTCCTAGCTTCAGAGAACTTATTGGGGCTCTTCCATCAGTGTTCCACATGGAAGTTCTTA TAATGGCGTTCCATTTATCATCCACTGACGAGAAGGCCATGCAAGCCAACTTAATATTTTCTACCCTTCAATCAGTAGGTGAACCTTCTGCTAGTTTTTC CAGCTTACAGCTATCCTGCTGGGGGTTATTGGTTTCAAGGTTGATCTTACTGCTCAGGCATATGCTGTTCTACCCAGATAATTGTCCATCATCACTGCTT CTAGATTTACGATCAAAGTTGAGGGACGGTTCCCTCAGCGGTCAGCTTTCTATATGTGTAAGTGAGGAGTTATTGTCTTGGGCCTCAGTTGCAGCAAAGA GTGTCTTGGGTGCATTTGTTGAGGACGATCCTTCCATCAGCTGCTTGATGAATCAATTGATTGATATTCCATCCCTTCCGCCTTCAGTTTGTAGGGATGA TTTGGCCATCAACTCATTGTCTCTGAGCAGTAATAATTTGGGTGATACATTTTTGCGGATTATGGGATTCTGGAAGGGGAGAAAGGCTAGTGTCATAGAA GACTTGCTAGTTGAAAGATATATTTTCTTTCTGTGTTCAGATATATCTTTGAAGGGCACATCATCAAACAATCAGGTTTCCATTTGGAGTGAGTTTGGGG ATATGGACATGTCCAATGTTGCCTTCCTATTTAACCTCAGCCACGTAGTTCTGGGCTGCAGTCCTGATGATGTGAGTGCTAATGGTCTTCAGGCTGTCAT TTTCAGTATCCTAAAACACATGTCTGCTGTGAACATACCTCGGGATGTTGAGGAACTTGGTTGGGATTTTTTCAGAAGCAGCATCGGTTTATCGTTGATA CTTTCTTTGGTCAATGTTGGTGTTACCAGACATGAATATAAGAACAAGGGCTCCGAGTTTAGTGCATTTTTGGTTAAATGCACAACGCGTGATATGCAGT ATGTTACTGTCGCTGAGCAGCTGGTTTCCTCCTTAATCAGTGACAATCAAATTGTGTTGTTGGTGGAGTTGTTGTCATCCTTGTTGAAGAAATATTTAAC GACTCACCGGAAAGCATTCATTGCCACTCTTGATACCAGCCACTACAGTGCTGAGGAATTTTCACCTCTGTCACTCCTAAAACACCCAGACATTGATAAA TGTGTACTGGATGAGATCCTTAGAAAATGTGGAATTAGCTATTGCCGTCTGGAGACTGCCTTTGACATATTGTTGAAGGTGGATTCTTTTGTTGATAAAG CAGCTCTAGGAAATCAAACGAGAACATTCTGGGAATCTGCATTGCATGGTTTTCCCTCTGATCTTCGAACTCCAAGTGCCGTGCTTCTCTCTTGTGTTAT CAGCATAAGGGATATTATCACTATTCTAGATTCGCTGCTTGGACTTGGGAACTTGAATGAAAAACTTACCTTGGATGCTCAGGTGCACCAAGAGATTCTC AACTCTGTGATGACTGTGAAATTTGATCGGATATTTGGAAGCCTTTCAGGAAAATGTGAATCAATTGTTCGTAACCTCAATCCTGAATCTGAATTGTCAG ATTATAGTGATATGTATCTGTTGACTTACATGGAATGTTTTCTCAGGCACCTTAATGTATCAGAAGCGAGTGACAGTAGTGTACTTGAATGGCTGATGAC CAGGACTGTTGATGTTGCTGACAGTCTGGAGAGAGAGCCGAGAAAATCTATCGTCTTCAAGTCCTTTCTTGGTGTGACAGATTCAATTGAGCATGTCAAG CAGTTCAGTTGGTCGAATTTTGGTGATATCTTGGTTCTGCTTGACTCCTTGGACCACTGTTCTTCTGATTCAGTAAATGTGAAGGTCCTCAATTTGTTTG TTGATATCTTATCTCGAGAATCTTCTTCTGAGCTCAAACAAAGGATACAAACCAAGTTCCTTGAAATGGATTCTGTTTGTTTATCCAAATGGTTAGAAAG CCGCCTGCTTGGTTCTTTTATGGAAAAATCAGCAGGTTCAAGCTGTGCCAAAGGAAGTTCTGGTTCTCTGAGAGAATCAGCCACAAGTTTCATTCTGTCG CTCGTGTCCTCGACTTGTGAATTCCCTTCCCAAAATCTGCACCATCATATGTTTGAATCGTTGCTTGCTTTGCTTGATAATGCATTCTTGCTATTTGATG TTCATATAGCCAAGTCCTTCTTCCATGTAGTTATTCAACTGTGTAGAGGAGAGGATTCTATGAAATTGCTTCTGAAGAAGATTATGATGTTGATGGAGAA GCTAGCAGGTGATGATTGTCTGCTTCCTGCGCTGAAATTTCTTTTCGGCTTTCTTGAGACTGGATTAAGCGATTGTGGATCCTGTCAGAATACTCTTGAC AAGTCGGCAGGAAATTCTTCCCATAGGAACATCATTGGTGAAGGTTCAACTCTTTTGAAGTCAGTAGGATCAAGAAAGAATGCTGATGCTATGGTCCTTC CTACCAATCAGGAAAGAAGCTGTTCTGCTATTGAATGTGATGCAACCTCTGCTGATGACGATGAGGATGATGGAACATCAGATGGCGATGTAGCTAGTGT GGATAAAGATGATGAGGATGACAGCAACAATGAAAGAGCTCTTGCTTCAAAAGTGTGCACATTTACATCCAGTGGTAGCAACTTTATGGAACAGCATTGG TACTTCTGTTATACTTGTGACCTGACTGTATCAAAGGGCTGCTGCTCTGTGTGTGCAAAAGTTTGTCACCGTGGTCACCGAGTAGTCTATTCTCGTTCAA GTAGATTTTTTTGTGATTGTGGAGCTGGTGGCGTTAGGGGTAGCAACTGTCAATGCTTGAAGCCCAGGAAGCTTACATCAAATGATGGTGCACCAGTACG CAATGCTGGGCTTTATCAGTCGTTCTTGCCCTTCACTGATGCTACAGATCAGTTGCCAGAGACTGATTCTGATCTGGAAGAGGATATTACGACGGATACA GATAGTTCTGTTAGGTGGCCAATTGCAAGAGAGATTCAGGACAAGATCCCACTTCTGATTGAAGCACTTGATATGGAGAGTCAAGTTCTTCAGCTCTGCT CTTCATTGTTGCCTTCTGTAATGGCTAAACGAGAATCTGAGCTATCAAAGAATAAGAGCATCATTGTTGGTACGGACAAGGTTCTTTCTTTTGGGGCTGA ACTGTTGCAATTGAAAAAGGCTTATAAGAGTGGATCACTGGACTTAAAGATAAAGGTGGATTATTCCAATACCAAGGATCTTAGATCACACTTGGCTACT GGTTCTCTTGTTAAGTCATTGCTTAGTGTTAGCACTCGAGGCAGACTTGGTGTTGGAGAAGGTGACAAAGTTGCCATATTTGATGTTGGACAGTTAATAG GACAGGCTGCTGTGGCCCCAGTTACAGCAGACAAAACCAATGTGAAGCCTCTTTCAAGAAATGTTGTTCGTTTTGAGATCGTACAACTTAGCTTCAATTC AGTACCAGAAAATTATCTTGCTGTTGCTGGGTATGAGGACTGCCAGGTCCTCACTTTGAATCCCCGTGGGGAAGTGATAGATAGACTTTCCATTGAGCTT GCTCTTCAGGGTGCTTATATTAGAAGGATTGATTGGGTTCCAGGTTCCCAGGTCAAGTTGATGGTGGTGACTAATAGATTCATTAAAATATATGATCTAT CTCAGGATAACATCAGCCCTCTGCACTATTTCACAGTGGCTGATGATATGATTGTTGATGCCACACTTTTGATAGCATCTCAAGGGGTAATGTTTCTGGT TGTTCTTTCTGAGCAGGGAAGGTTGTTAAGGCATCAATTGCCCGTGGAAGGAAATATTGGAGCAACACCGTTAAAGGATATTATCCAGATTGAAGACCGT GTTATCAATGCAAATGGCTCATCTTTGTACTACTCTTCTACTTATAAATTGCTTATCGTCTCCTATCAAAATGGGACTACTTTGATGGGTCGTTTAAGTG CTGATGCTATGCGTCTAGCTGATATATCTCTCGTTTATGAAGAGGAACATGATGGTAAACTGCGACCTGCTAGTTTACATCACTGGAGAGAATTGTTGGT CGGAAGTGGTTTGTTTGGTTGCTTCTCTTGTACCAAATCCAATTCTGCACTTGCTGTATATGTGGAAGCTCATGCACTACTTGCACAGAACTTGAGGCAT GCTACAAGCACGACGTCGAACTTAGTTGGTTTAGCTGCGTATAAGCCTTTGTCCAAGGACAAAATTCATTGTCTTGTTTTACATGATGATGGAAGCCTTC AAATATATGTGCACTCGCCAGGTGGAAGTGATAATGATGCAAATGTGGCAGCTGAGCAAGTAAAGAAGTTAGGTTCTGGCATCCTCAACAGTAAAGTGTA TGCGGGTTTGAAGCCTGAATTTCCTCTTGATTTCTTTGAGAAAACAGTTCTGATCACGGCAGATGTGAAATTGGGAGGCGATGCAATCAGAAATGGTGAT TCTGAAGGAGCAAAACAGAGTTTGGGATCAGAGGATGGCTTTCTGGAAGGCAGCAGTCCGGCAGGCTTTAAGATATCTGTCTCCAATCCAAACCCTGATA TTGTTATGGTTGGTATTCGTGTCCAAGTGGGTAACACATCAGCAAATCACATACCTTCTGAGATTGGTATTTTCCAGAGGGTGATTAAGTTGGATGAAGG CATGCGGTCCTGGTATGACATACCCTTCACTGTTGCTGAATCTCTTCTTGCTGATGAAGATTTTGTAATCACTGTGGGGTCTACTTTCAACGGCACTGCA CTGCCTAGAATTGATTCCCTTGAAGTGTATGGGCGAGCAAAAGATGAATTTGGTTGGAAAGAGAAAATGGATGCAGTGTTGGGTATGGAATCTCGTGTGC TAGGCTCGAAGTCATCGCTTGCTGGGCCAGGTAAGAGGTGCAGGTCTGTGCAGTCTACTTCCATCCAGGAGCAGGCTATAGCAGATGCACTTAAGTTTCT GTCGAAGTTATATCCCTTATGCCATGGGGTAGAAGATCAAGCGAAAAAGCAATCTACTGAACTGAAGTGCAAGATGTTATTGGAGACCATATTTGAGAGT GAGAGGGAGCCACTACTTCAGGCTGCTGCTTGTCGTGTTCTGCAAGCAATTTTCCCCAGGAAAGAGAAATATTACCAGATCAAGGACACAATGCGCCTCC AAGGAGTTGTTAAATCTACATCTGCTCTTTTGTCAAGATTAGGAATTGGTGGAACTACAGGAGGGTGGATTATCGAGGAGTTCACTGCTCAAATGCGTGC TGTGTCTAAGATTGCTTTGCATCGTCGTTCAAATCTAACCAATTTTCTTGAGATGAATGGTTCCGAGGTGGTGGATGGCCTGATGCTAGTTTTATGGGGA ATTTTAGACTTAGAACAGCCTGATACTCAGACAATGAACAATATCGTCATTTGTGCTGTAGAGCTTATATATTGTTATGCCGAATGTCTAGCTTCACGCA GTGAAGATGCAGCGAAGAGTTCTGTTGCCCCTGCTGTTGTTGTTCTCAAGAAACTTCTGTTTTATCCCAACGAGGCAGTACAATCCGCAAGCAGCCTTGC TATTTCGTCAAGGTTGCTCCAAGTTCCTTTCCCAAAGCAAACTATGTTATCAACAGATGACGGTGTGGATAATTCCGTTTCTGCATCTGGCCCGGGTGAT ACATCAGGCAGTGTAAACACACAAGTCATGATTGAAGAAGATACCATCACCTCATCTGTCCAGTATTGTTGCGATGGTTGTTCCACTGTCCCTATACTGA GGCGAAGATGGCATTGCACCGTCTGTCCTGATTTTGACTTATGCGAAGCTTGTTATCAAGTATTGGATGTGGATCGCCTCCCTCCACCTCATTCCAGAGA TCATCCTATGACTGCTATTCCAATTGAATTGGAATCATTGGGAGGAGATGGCAGTGAAATTCACTTCTCCACAGAAGATGTAAATGATTCTAACATGTTA CGTGGCACATGTGATATTGTCCTGCAGAACTCTACAACTTCAATTCATGTTTTGGAACCCAATGAGTCTGGGGAGTTCTCCGCAGCAATGACTGATAGTG TTTCTATATCTGCTTCAAAACGGGCTGTGAACTCTTTGCTTCTTTCTGAACTGCTTGAACAGTTGGGTGGATGGATGCACACAACATCTGGTGTGCGGGC TATCCCTATCATGCAATTATTTTACAGACTATCATCTGCTGTGGGTGGACCTTTTATTGATGGGTCACAGCCCGACAACCTTGACCTGGAGAAGTTAATT ACTTGGTTCTTGGACGAGACCAATGTCAACCAACCTTTTCCAGCCAAAACACGTTCTTCTTTTGGAGAGGTTACAATTCTTGTCTTCATGTTTTTCACTT TGATGCTTCGAAATTGGCACCAGCCTGGTACCGATGGTTCTTCCAAATCAACTGGGACTGCTGAGAAGCATGATAAAAATGTTAGTCAGGCCACTTCTGT TGCTTCGCAGTCCACCTTGGACAGTCCAGAGAAAAGTAATTTTGTATCCCAACTGCTCCAGGCATGTGGCTCTCTAAGAAATCAGGCTTTCATAAATTAT TTGATGGACATCTTGCAGCAGTTAATGCAGGTTTTTAAATCCTCTAGTGGGAATATGGATCCCTCACTCTCAAACAACGGTTCTGGTTGTGGGTCTCTGT TAACTGTCCGAAGGGATTTACCAGCTGGGAACTTTTCCCCTTTCTTTTCAGATTCATATGCCAAAGCACATCACAGTGATATTTTTATGGACTATCATAG GTTATTACTAGAGAATGCTTTCAGGCTGGTATATACATTGGTTAGGCCGGAGAAGCAGGAAAAGACGGGTGATAAAGAGAAGGTTTATAGAGCATCGTCT AGCAAGGATCTGAAGCTAGATGGATATCAGGATGTCCTCTGCAGTTATATCAACAATCCTAACACTACATTTGTAAGAAGATATGCAAGGAGACTATTTC TGCATATATGTGGGAGCAAAACTCAGTATTACAGTATTCGAGATTCATGGCAATTCTCTAGTGAAGTGAAGAAACTTTACAAGCACATCAATAAGTCTGG ATCACTTCAAAACCCAGTCCCATATGAGAGGAGTGTAAAGATTGTAAAGTGCTTATCTACTATGGCTGAAGTAGCTGCGGCACGACCTCGGAATTGGCAG AAGTACTGTTTGAGGCATGGGGATGCATTGCCCTTTTTTATGGGTGCAGTGTTCTATTTCAGTGAAGAGGCTGTTGTTCAGACTCTAAGACTCCTCAATT TAGCATTTTATTGTGGGAAGGAAATTGGTCACTCCCAGAAAGTTCAAGGAGGTGAAACTGGAACAAGCTCAATTAAGCCTGGGTCACAAACTGGAGATTC AAAGAAGAAGAAAAAGGGTGAAGAAGGCATTGACTCTAGTTCTGAGAAGTCGTATTTGGATATGGAGGCCGCAGTAGATATCTTCAATGACAAGGATGGC GACGTTCTGAGGCATTTTGTTGATTGTTTTTTGCTGGAGTGGAACTTAAGCTCTGTACGTGCAGAAGCGAAGTGTGTTCTTTATGGTGCATGGAATCATG GAAAACATTCATTCAAGGAGATGATGCTGCTGGCCCTCTTGCAAAAAGTAAGGAATTTACCTGTCTATGGCCAGAATATCATTGAATTCACTGAACTGGT CACCTGGTTACTGGGGAAGACTCCAGAAACTGGTTCAAAGAGCTCTGAACTTCTCGATCGTTGCTTGACTAATGAAGTCATTAGTAGTATCTTCGATACT CTTCATTCACAGAATGAGCTCATAGCTAATCATCCTAATTCTCGCATATATAATACATTGAGTGGTCTTGTTGAGTTTGATGGTTACTACCTTGAAAGTG AGCCCTGTGTTGCATGCAGTTCTCCTGAGTATGGCCGTTTTGAGTTCAACTTCATGGCGAAACCAAGTTTTACATTCGATGATATGGAGAATGATGAAGA TATGAAGAGGGGTTTGACAGCTATTGAGTCAGAGTCAGAAAATGCGCACAGGAGATACCAGCAACTTCTGGGTTTTAAAAAGCCCCTTCTGAAGATCGTA TCAAGTATTGGGGAGAATGAAATGGATTCACAACAGAAGGACTCTGTTCAGCAAATGATGGTTTCTCTACCTGGACCTTCGTGCAAAGTGAACCGAAAGA TCGCTCTTCTTGGTGTCTTGTATGGGGAAAAATGTAAGGCTGCGTTTGATTCTGTCAGCAAAAGTGTCCAGACTCTCCAGGGACTTCGCCGTGTTCTGAT GAGTTATCTACACCAGAAACATTCAGATGATCCTGTTCCAGCATCTAGATTTGTTGCTTCCAGGTCTCCCAATAGCTGTTATGGCTGTGCAACCACTTTC ATCACACAGTGTCTGGAGATACTGCAGGTCTTGTCAAAACATTCTCATTCGAGAAAACAACTTGTTTCAGCTGGGATCTTATCGGAGTTGTTTGAAAACA ATATTCATCAGGGTCCAAAACCTGCTCATCTCCAGGCAAGGTCTGTTCTATGTGCTTTCTCTGAAGGTGATGCTGGTGCAGTGATCGAGTTGAATAGTTT GATACAGAAAAAGGTCATGTACTGCCTTGAACATCATCGGTCCATGGACATTTCTGTGGCCACTCGTGAGGAGATGATGTTACTATCAGAAGTGTGTTCC TTGGCTGATGAGTTTTGGGAGTCGCGATTGCGCATCGTCTTCCAGCTGTTGTTTTCATCCATTAAGTTGGGTGCTAAACATCCTGCAATAGCTGAGCATA TCATCCTTCCTTGTCTAAGGATCATTTCTCAGGCTTGCACCCCTCCTAAACCTGATAAGACAGATAAAGAGCAGGGCATAGCAAAGTCAGCTTCTGCGTC GCGATTGAAGGAAGATAATAGCTTGAAGACATCTGGATCTCTAAGTGGCGTTACCAGTGTTAACAAGTCTGTAACAGAACCACCGGAAAAAAAATTGTCT GCTTTGAGTAAGACGCACGATATCCAACTCCTGAGCTTTCAAGAATGGGAGAAAGGAGCTTCATATCTCGATTTTGTTAGAAGGCAGTACAAAGCGTCTC AGGCTGTCAAAAGTCACAAATTGCGCCCTCAGAGAAATGAGTACTTGGCCCTCAAATATATGCTCCGGTGGAAGCGCCGTGCCTGTAAGACAGTTAAAGG TGACTTGTCTACTTTTGAACTAGGTTCATGGGTGACAGAACTTGTTCTCAGTCCCTGTTCTCAATCCATCCGGTCAGAGATGTGCATGCTGATTAGTTTA CTTTGTGCACAAAGTGCATCTAGACAATTCCGGCTGTTGAATTTACTCGTGGCTTTGCTACCATCAACTCTTGCTGCCGGTGAAAGTGCTACTGAATACT TTGAATTGCTTTTCAAGATGACCGATTCGGAAGATGCTCGCCTGTTCTTGACAATTCAGGGATGCCTAAGCACAATCTGCAAACTGATTGCGCAGGAAGT CGGTAATGTTCATCCCCTGGAGAAAAGTTTGCATGTTGATATTTCTCAAGGATTCATTCTCCATAAGCTTATAGAGCTACTTGGAAAATTCTTAGAGGTT CCAAATATAAGATCCAGATTCATGCGCGATAATTTGTTACCTGATATTCTTGAGGCTCTTATTGTCATTCGGGGCTTGGTAGTTCAAAAGACAAAGTTGA TCAGTGATTGCAATCGTCTGCTAAAAGACCTTCTGGATGGGCTTCTACTTGAAAGCAGTGAGAATAAGCGACAGTTTATTCGAGCTTGTATCTCTGGCCT GCAAATCCATGCGAAGGAAAGGAAACCACGCACATGTTTGTTTATACTTGAACAGCTTTGCAACTTGATCTGCCCCTCGAAACAAGATTCAGTTTATTTG CTGGTTCTGAACAAGGCTCACACACAAGAAGAGTTTATCAGAGGATCCATGACAAAGAATCCTTACTCTAGTGCTGAGATTGGTCCTCTCATGCGCGATG TTAAAAATAAGATCTGCCAGCAATTGGATTTGCTTGGCCTCATTGAAGATGACTACGGAATGGAACTTTTGGTTGCTGGAAATATTATCTCTCTTGATTT GAGCATTGCTCAAGTTTACGAGCAGGTGTGGAAAAAATCAAACAGCCAATCGTCAAATTCCATGGCTAATAACAACTTGTTGTCCTCGAGTACTGCAGCT GCGGCTAGAGAATCTCCGCCCATGACAGTAACCTACCGTCTTCAGGGATTGGATGGTGAAGCCACTGAGCCCATGATAAAAGAATTAGAGGAAGATAGAG AGGAATCACAAGATCCTGAGGTGGAATTTGCAATAGCTGGTGCAGTTCGGGAATGTGGTGGATTAGAAGTTTTGCTGGGAATGATACAGCGGCTGCGAGA TGATTTGAAGTTGAACCATGAGCAGTTAGTTGCAGTTCTTAATCTCCTCATGCATTGCTGTAGGATAAGGGAAAACAGACATGCCTTGTTAAAACTTGGT GCTTTAGGTCTTCTTCTGGAAACAGCAAGGCGGGCTTTCGCTGTGGATGCTATGGAACCAGCAGAAGGCATCCTTCTTATTGTAGAGAGTTTGACCCTGG AAGCTAATGAGAGTGATAACATTAGTATTACACAGAGTACACTGTCTGTTAGCAGCGAGGAAACAGGTACTGGAGGAGAGGCAAAGAAAATAGTTCTCAT GTTCCTGGAAAGATTGTGTCATCCTCTGGGGCTTAAAAAATCAAACAAACAGCAGAGGAATACTGAGATGGTTGCTAGAATTTTGCCCTACTTGACGTAT GGTGAAGCTGCTGCAATGGAAGCACTTGTTGATTACTTCAATCCATACTTGCAAGACTGGAAGGAGTTTGACGTGTTGCAGAAACAGCATGAAGATAATC CAGAAGACAATATTGCTGAAAGGGCAGTCAAGCAGAGGTTTACTGTCGAAAACTTTGTTCGGGTGTCTGAATCACTGAAGACGAGTTCTTGTGGGGAACG GTTGAAGGACATAATTATAGAGAAGGGAATCACGGCTATTGCCGTTAGACACTTGAGGGAAAGCTTTGCTATTGCAGGCCAAACTGGGTTCAAAACTACT GCAGAGTGGTCATTGGGTCTAAAGTTGCCTTCTGTTCCTCTTATATTGTCTATGCTGAGGGGATTGTCAATGGGACATTTTGCAACCCAGAGGTGCATTG ATGAGGGAGCCGTCTTACCACTCCTCCACGCTCTCGAAGGAGTGTCTGGGGAAAATGAGATCGGTGCCAGGGCTGAGAATTTGTTGGATACACTGTCTAA TAAGGAAGGGAAAGGCGATGGTTGCTTGGAAGAAAAGGTGAATGAGTTACGCCGGGCCACTCGGGACGAGATGAGGCGCCGAGCTCTAAGGAAGAGACAG GAGCTACTTCAGGGGCTTGGAATGAGGCAAGAATTATCCTTGGATGGAGGTGAGCGAATAGTTGTCGCTAGGCCTAACCTAGAAGGCCTGGATGACGTGG AGGAAGAAGCAGATGGCTTGGCATGTATGGTTTGCCGAGAGGGCTACAGTTTGAGGCCAAGTGACTTGCTGGGGGTTTACACATTCAGCAAGCGGGTGAA TCTGGGTGCTGGGACTACAGGGTCTGCTCGTGGTGAATGTGTATACACTACTGTTAGTTATTTCAATATCATTCATTTCCAGTGCCATCAAGAGGCCAAA AGGGCTGATGCCGCTTTGAAAAATCCCAAGAAAGAGTGGGAGGGGGCTACGCTGAGAAACAATGAGTCACTCTGCAATTCACTATTCCCAATTCGAGGTC CGCTCGTCCCACTAGCACAATATACCCGCTATATCGACCAGTTCTGGGATAACCTCAATGCTCTTGGACGAGCTGATGGGAGCCGACTCCGACTACTAAC TTACGATATTGTACTGGCGTCTCTCGAATCCATAACCGGATTGAGTTGGGATCCAGAATTAATCCAAAAATAA
AA sequence Show only first row Show all	>Lus10005090 pacid=23171479 polypeptide=Lus10005090 locus=Lus10005090.g ID=Lus10005090.BGIv1.0 annot-version=v1.0 MEDHLTKLHRCLFESNTSPTDFFHSLRSDASIAIALQQFYLILKRGVSVVDADDVDGKRLGFQLWTDSQIQAVVSFGLAIVSASRSLSGILADRNSALST CFQLGEFTLEALFYLNQAEPVLIAVVQQLLEFGVCFLENSLFSNDESSTQMNTVLLMELALVKGIDKLPDQSCSLKCMLELLPVVSGSFYDVQFDMHMRC SLQGFSCLRGEKQVDRLLMTLATKSTQPEGQISGLDGSTHAMSNLSFASQHWIVIHVDCVQRLIPYCKQLIELADVHGEKWASTDFAGRLSFSLRILRLL RSLVIESPYIEYDESLLEQVASLADTIPIIFRQNLEFVNKQGVVESDFESLAISLVEEFLHLVGLIFCNSSVPQNIKVCIVASILDNLDSSAWTHDKSAA IVKPPLVYFPRTIFLILGIIEDVRREKCQELDRKLTSSSSELPNISQSCHLHCKEVPLVNGFTVEESLRVIFSSSVKWLDNVMHLILFLQWEGTKFRPKL EKSQSSCLKASCVVEVDNAACHEDEALFGNLFSEGCRSVGSAEVYDQPQVVGSCSNNCNMPMQAASELLGFLKDVVFSQEYRTLYEDGCRMIRENHIISM LSLLNYQDLEDKSFDGFSSSLDERKTWGVHELCFEILGKLLNQRALSASLEECLVDQILIVENGAFAYSDRALMLLVNALFARAGPDGGRLRTRLYEGFV AFITDRIKNVCSECPSFRELIGALPSVFHMEVLIMAFHLSSTDEKAMQANLIFSTLQSVGEPSASFSSLQLSCWGLLVSRLILLLRHMLFYPDNCPSSLL LDLRSKLRDGSLSGQLSICVSEELLSWASVAAKSVLGAFVEDDPSISCLMNQLIDIPSLPPSVCRDDLAINSLSLSSNNLGDTFLRIMGFWKGRKASVIE DLLVERYIFFLCSDISLKGTSSNNQVSIWSEFGDMDMSNVAFLFNLSHVVLGCSPDDVSANGLQAVIFSILKHMSAVNIPRDVEELGWDFFRSSIGLSLI LSLVNVGVTRHEYKNKGSEFSAFLVKCTTRDMQYVTVAEQLVSSLISDNQIVLLVELLSSLLKKYLTTHRKAFIATLDTSHYSAEEFSPLSLLKHPDIDK CVLDEILRKCGISYCRLETAFDILLKVDSFVDKAALGNQTRTFWESALHGFPSDLRTPSAVLLSCVISIRDIITILDSLLGLGNLNEKLTLDAQVHQEIL NSVMTVKFDRIFGSLSGKCESIVRNLNPESELSDYSDMYLLTYMECFLRHLNVSEASDSSVLEWLMTRTVDVADSLEREPRKSIVFKSFLGVTDSIEHVK QFSWSNFGDILVLLDSLDHCSSDSVNVKVLNLFVDILSRESSSELKQRIQTKFLEMDSVCLSKWLESRLLGSFMEKSAGSSCAKGSSGSLRESATSFILS LVSSTCEFPSQNLHHHMFESLLALLDNAFLLFDVHIAKSFFHVVIQLCRGEDSMKLLLKKIMMLMEKLAGDDCLLPALKFLFGFLETGLSDCGSCQNTLD KSAGNSSHRNIIGEGSTLLKSVGSRKNADAMVLPTNQERSCSAIECDATSADDDEDDGTSDGDVASVDKDDEDDSNNERALASKVCTFTSSGSNFMEQHW YFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSNCQCLKPRKLTSNDGAPVRNAGLYQSFLPFTDATDQLPETDSDLEEDITTDT DSSVRWPIAREIQDKIPLLIEALDMESQVLQLCSSLLPSVMAKRESELSKNKSIIVGTDKVLSFGAELLQLKKAYKSGSLDLKIKVDYSNTKDLRSHLAT GSLVKSLLSVSTRGRLGVGEGDKVAIFDVGQLIGQAAVAPVTADKTNVKPLSRNVVRFEIVQLSFNSVPENYLAVAGYEDCQVLTLNPRGEVIDRLSIEL ALQGAYIRRIDWVPGSQVKLMVVTNRFIKIYDLSQDNISPLHYFTVADDMIVDATLLIASQGVMFLVVLSEQGRLLRHQLPVEGNIGATPLKDIIQIEDR VINANGSSLYYSSTYKLLIVSYQNGTTLMGRLSADAMRLADISLVYEEEHDGKLRPASLHHWRELLVGSGLFGCFSCTKSNSALAVYVEAHALLAQNLRH ATSTTSNLVGLAAYKPLSKDKIHCLVLHDDGSLQIYVHSPGGSDNDANVAAEQVKKLGSGILNSKVYAGLKPEFPLDFFEKTVLITADVKLGGDAIRNGD SEGAKQSLGSEDGFLEGSSPAGFKISVSNPNPDIVMVGIRVQVGNTSANHIPSEIGIFQRVIKLDEGMRSWYDIPFTVAESLLADEDFVITVGSTFNGTA LPRIDSLEVYGRAKDEFGWKEKMDAVLGMESRVLGSKSSLAGPGKRCRSVQSTSIQEQAIADALKFLSKLYPLCHGVEDQAKKQSTELKCKMLLETIFES EREPLLQAAACRVLQAIFPRKEKYYQIKDTMRLQGVVKSTSALLSRLGIGGTTGGWIIEEFTAQMRAVSKIALHRRSNLTNFLEMNGSEVVDGLMLVLWG ILDLEQPDTQTMNNIVICAVELIYCYAECLASRSEDAAKSSVAPAVVVLKKLLFYPNEAVQSASSLAISSRLLQVPFPKQTMLSTDDGVDNSVSASGPGD TSGSVNTQVMIEEDTITSSVQYCCDGCSTVPILRRRWHCTVCPDFDLCEACYQVLDVDRLPPPHSRDHPMTAIPIELESLGGDGSEIHFSTEDVNDSNML RGTCDIVLQNSTTSIHVLEPNESGEFSAAMTDSVSISASKRAVNSLLLSELLEQLGGWMHTTSGVRAIPIMQLFYRLSSAVGGPFIDGSQPDNLDLEKLI TWFLDETNVNQPFPAKTRSSFGEVTILVFMFFTLMLRNWHQPGTDGSSKSTGTAEKHDKNVSQATSVASQSTLDSPEKSNFVSQLLQACGSLRNQAFINY LMDILQQLMQVFKSSSGNMDPSLSNNGSGCGSLLTVRRDLPAGNFSPFFSDSYAKAHHSDIFMDYHRLLLENAFRLVYTLVRPEKQEKTGDKEKVYRASS SKDLKLDGYQDVLCSYINNPNTTFVRRYARRLFLHICGSKTQYYSIRDSWQFSSEVKKLYKHINKSGSLQNPVPYERSVKIVKCLSTMAEVAAARPRNWQ KYCLRHGDALPFFMGAVFYFSEEAVVQTLRLLNLAFYCGKEIGHSQKVQGGETGTSSIKPGSQTGDSKKKKKGEEGIDSSSEKSYLDMEAAVDIFNDKDG DVLRHFVDCFLLEWNLSSVRAEAKCVLYGAWNHGKHSFKEMMLLALLQKVRNLPVYGQNIIEFTELVTWLLGKTPETGSKSSELLDRCLTNEVISSIFDT LHSQNELIANHPNSRIYNTLSGLVEFDGYYLESEPCVACSSPEYGRFEFNFMAKPSFTFDDMENDEDMKRGLTAIESESENAHRRYQQLLGFKKPLLKIV SSIGENEMDSQQKDSVQQMMVSLPGPSCKVNRKIALLGVLYGEKCKAAFDSVSKSVQTLQGLRRVLMSYLHQKHSDDPVPASRFVASRSPNSCYGCATTF ITQCLEILQVLSKHSHSRKQLVSAGILSELFENNIHQGPKPAHLQARSVLCAFSEGDAGAVIELNSLIQKKVMYCLEHHRSMDISVATREEMMLLSEVCS LADEFWESRLRIVFQLLFSSIKLGAKHPAIAEHIILPCLRIISQACTPPKPDKTDKEQGIAKSASASRLKEDNSLKTSGSLSGVTSVNKSVTEPPEKKLS ALSKTHDIQLLSFQEWEKGASYLDFVRRQYKASQAVKSHKLRPQRNEYLALKYMLRWKRRACKTVKGDLSTFELGSWVTELVLSPCSQSIRSEMCMLISL LCAQSASRQFRLLNLLVALLPSTLAAGESATEYFELLFKMTDSEDARLFLTIQGCLSTICKLIAQEVGNVHPLEKSLHVDISQGFILHKLIELLGKFLEV PNIRSRFMRDNLLPDILEALIVIRGLVVQKTKLISDCNRLLKDLLDGLLLESSENKRQFIRACISGLQIHAKERKPRTCLFILEQLCNLICPSKQDSVYL LVLNKAHTQEEFIRGSMTKNPYSSAEIGPLMRDVKNKICQQLDLLGLIEDDYGMELLVAGNIISLDLSIAQVYEQVWKKSNSQSSNSMANNNLLSSSTAA AARESPPMTVTYRLQGLDGEATEPMIKELEEDREESQDPEVEFAIAGAVRECGGLEVLLGMIQRLRDDLKLNHEQLVAVLNLLMHCCRIRENRHALLKLG ALGLLLETARRAFAVDAMEPAEGILLIVESLTLEANESDNISITQSTLSVSSEETGTGGEAKKIVLMFLERLCHPLGLKKSNKQQRNTEMVARILPYLTY GEAAAMEALVDYFNPYLQDWKEFDVLQKQHEDNPEDNIAERAVKQRFTVENFVRVSESLKTSSCGERLKDIIIEKGITAIAVRHLRESFAIAGQTGFKTT AEWSLGLKLPSVPLILSMLRGLSMGHFATQRCIDEGAVLPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGCLEEKVNELRRATRDEMRRRALRKRQ ELLQGLGMRQELSLDGGERIVVARPNLEGLDDVEEEADGLACMVCREGYSLRPSDLLGVYTFSKRVNLGAGTTGSARGECVYTTVSYFNIIHFQCHQEAK RADAALKNPKKEWEGATLRNNESLCNSLFPIRGPLVPLAQYTRYIDQFWDNLNALGRADGSRLRLLTYDIVLASLESITGLSWDPELIQK

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G02260		CRM1, TIR3, LPR...	UMBRELLA 1, TRANSPORT INHIBITO...		Lus10005090 [exp]	0	1
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Lus10038363 [exp]	2.4	0.9677
AT3G02260		CRM1, TIR3, LPR...	UMBRELLA 1, TRANSPORT INHIBITO...		Lus10034360 [exp]	2.6	0.9731
AT3G02260		CRM1, TIR3, LPR...	UMBRELLA 1, TRANSPORT INHIBITO...		Lus10000087 [exp]	4.7	0.9697
AT1G03060		SPI	SPIRRIG, Beige/BEACH domain ;W...		Lus10018743 [exp]	6.6	0.9676
AT5G15680			ARM repeat superfamily protein...		Lus10031961 [exp]	6.7	0.9612
AT4G03550		ATGSL5, PMR4, G...	POWDERY MILDEW RESISTANT 4, gl...		Lus10033689 [exp]	7.9	0.9425
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Lus10014778 [exp]	8.8	0.9592
					Lus10002928 [exp]	10.2	0.9477
AT2G07360			SH3 domain-containing protein ...		Lus10027587 [exp]	10.5	0.9555
AT1G58250		SAB	SABRE, Golgi-body localisation...		Lus10024283 [exp]	12.1	0.9587

Compare expression of checked genes

Lus10005090 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.