Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G01390 92 / 8e-23 UDP-Glycosyltransferase superfamily protein (.1) AT4G01070 89 / 7e-22 UGT72B1, GT72B1 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) AT1G01420 81 / 1e-18 UGT72B3 UDP-glucosyl transferase 72B3 (.1) AT2G18570 66 / 2e-13 UDP-Glycosyltransferase superfamily protein (.1) AT5G66690 66 / 2e-13 UGT72E2 UDP-Glycosyltransferase superfamily protein (.1) AT2G18560 64 / 1e-12 UDP-Glycosyltransferase superfamily protein (.1) AT5G26310 61 / 1e-11 UGT72E3 UDP-Glycosyltransferase superfamily protein (.1) AT3G50740 58 / 9e-11 UGT72E1 UDP-glucosyl transferase 72E1 (.1) AT3G16520 56 / 8e-10 UGT88A1 UDP-glucosyl transferase 88A1 (.1.2.3) AT3G21760 48 / 4e-07 HYR1 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039588 [exp] 250 / 1e-82 AT4G01070 419 / 2e-143 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10029452 [exp] 117 / 1e-31 AT4G01070 582 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10005950 [exp] 114 / 8e-31 AT4G01070 573 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10029453 [exp] 94 / 4e-23 AT4G01070 515 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10005951 [exp] 92 / 1e-22 AT4G01070 510 / 5e-179 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10024037 [exp] 88 / 6e-21 AT2G18570 412 / 3e-140 UDP-Glycosyltransferase superfamily protein (.1) Lus10041713 [exp] 80 / 2e-18 AT2G18570 415 / 3e-141 UDP-Glycosyltransferase superfamily protein (.1) Lus10003944 [exp] 72 / 2e-15 AT4G01070 400 / 1e-135 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10001906 [exp] 69 / 3e-14 AT4G01070 431 / 1e-147 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G168600 [exp] 102 / 1e-26 AT4G01070 595 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.014G096100 [exp] 102 / 2e-26 AT4G01070 610 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.014G096000 [exp] 96 / 6e-24 AT4G01070 544 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.014G041900 [exp] 87 / 9e-21 AT4G01070 295 / 2e-95 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.007G030500 [exp] 86 / 3e-20 AT2G18570 494 / 8e-173 UDP-Glycosyltransferase superfamily protein (.1) Potri.014G041800 [exp] 80 / 3e-18 AT4G01070 390 / 9e-132 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.003G138200 [exp] 78 / 1e-17 AT4G01070 539 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Potri.007G030400 [exp] 77 / 4e-17 AT3G50740 566 / 0.0 UDP-glucosyl transferase 72E1 (.1) Potri.007G030300 [exp] 63 / 3e-12 AT3G50740 496 / 1e-173 UDP-glucosyl transferase 72E1 (.1) Potri.007G029800 [exp] 63 / 3e-12 AT3G50740 478 / 3e-166 UDP-glucosyl transferase 72E1 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10005335 pacid=23154621 polypeptide=Lus10005335 locus=Lus10005335.g ID=Lus10005335.BGIv1.0 annot-version=v1.0 ATGCCCCATCTCCGCTACGCGATCAGGTCGCTGTCGGAGAAATTTCCTCTATCGTCCTTGATCGCCGACATATTCGGCACCGACGCATTCGACGTGGCCA GGGAGTTCAAATTGGAGTCGTATTTTTTCGTGACGTTGAACGTTTTGACTCTGGCGCTATGCAACTATATGTCGAAGCTGGATGCCGAGGTTCAAGGGGA CTACCATCAACTGACCGAACCGATTCGGCTGCCAGGGTTCCGGTTCGTGTTTCCGGTTGAGGACCTGCACCCTTCGATCCTAGACAGGAACATCGATGCT TACCCGATGCTGCTTCGTCACTCGAGCCGGCAGCGTTTGGCTGACGGGTTTATAGTGAACAGCTTCATGGAGGTGGAAGTAGAGATCATCGAAGCTTTGA GAGGGTAG
AA sequence Show only first row Show all	>Lus10005335 pacid=23154621 polypeptide=Lus10005335 locus=Lus10005335.g ID=Lus10005335.BGIv1.0 annot-version=v1.0 MPHLRYAIRSLSEKFPLSSLIADIFGTDAFDVAREFKLESYFFVTLNVLTLALCNYMSKLDAEVQGDYHQLTEPIRLPGFRFVFPVEDLHPSILDRNIDA YPMLLRHSSRQRLADGFIVNSFMEVEVEIIEALRG

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G01390			UDP-Glycosyltransferase superf...		Lus10005335 [exp]	0	1
AT2G15220			Plant basic secretory protein ...		Lus10001358 [exp]	6.9	0.7845
AT1G01420		UGT72B3	UDP-glucosyl transferase 72B3 ...		Lus10005334 [exp]	7.5	0.7352
AT2G44810		DAD1	DEFECTIVE ANTHER DEHISCENCE 1,...		Lus10042914 [exp]	14.1	0.7476
AT2G25930		PYK20, ELF3	EARLY FLOWERING 3, hydroxyprol...		Lus10006857 [exp]	23.1	0.7264
AT1G14550			Peroxidase superfamily protein...		Lus10024206 [exp]	23.5	0.6501
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10015158 [exp]	26.4	0.7189
					Lus10040397 [exp]	28.9	0.7189
AT1G76340		GONST3	golgi nucleotide sugar transpo...		Lus10034674 [exp]	30.8	0.6124
AT5G60010			ferric reductase-like transmem...		Lus10019390 [exp]	31.2	0.7189
AT3G53690			RING/U-box superfamily protein...		Lus10042610 [exp]	33.3	0.7189

Compare expression of checked genes

Lus10005335 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.