Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G16060 237 / 2e-81 ATGLB1, ARATHGLB1, NSHB1, AHB1 CLASS I HEMOGLOBIN, hemoglobin 1 (.1) AT3G10520 162 / 5e-52 ATGLB2, ARATHGLB2, NSHB2, AHB2 NON-SYMBIOTIC HAEMOGLOBIN 2, ARABIDOPSIS HEMOGLOBIN 2, haemoglobin 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037926 [exp] 155 / 4e-49 AT3G10520 230 / 1e-78 NON-SYMBIOTIC HAEMOGLOBIN 2, ARABIDOPSIS HEMOGLOBIN 2, haemoglobin 2 (.1) Lus10038655 [exp] 116 / 3e-34 AT3G10520 169 / 3e-55 NON-SYMBIOTIC HAEMOGLOBIN 2, ARABIDOPSIS HEMOGLOBIN 2, haemoglobin 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G110800 [exp] 258 / 8e-90 AT2G16060 253 / 1e-87 CLASS I HEMOGLOBIN, hemoglobin 1 (.1) Potri.009G110901 [exp] 58 / 3e-11 AT2G16060 59 / 2e-11 CLASS I HEMOGLOBIN, hemoglobin 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0090 [flax] [poplar] Globin PF00042 [flax] [poplar] Globin Globin
Representative CDS sequence Show only first row Show all	>Lus10005467 pacid=23174346 polypeptide=Lus10005467 locus=Lus10005467.g ID=Lus10005467.BGIv1.0 annot-version=v1.0 ATGTTCAGTGAAGAGCAAGAAGGTCTGGTAGTAAAGTCATGGAGTGTGATGAAGAAAGATGCTGCTAGTCTGGGTCTCAAATTCTTCCTCAAGATATTTG AGATAGCACCGTCTGCAAAGAAGTTATTCCCATTCTTGAGGGAGTCAAATGTCCCAGTTGAAAAGCATTCAAAGCTCAAGCCTCATGCCATGGCTGTTTT CCTCATGACATGTGAATCAGCAGTGCAACTGAGGAAATCAGGGAAAGTTACAGTGAGAGAGTCTAGCTTGAAGAAATTGGGGGCTGTTCATTCCAAATAC GGAGTGGCCGACGAACATTTTGAGGTGACCAAGTTTGCACTGCTGGAAACAATCAAGGAAGCAGTGGGAGAAATGTGGTCAGCAGATATGAAAAATGCAT GGGGAGAAGCTTACGATCAGTTAGTAACTGCTATTAAATCTGAAATGAAGTCAAATTAA
AA sequence Show only first row Show all	>Lus10005467 pacid=23174346 polypeptide=Lus10005467 locus=Lus10005467.g ID=Lus10005467.BGIv1.0 annot-version=v1.0 MFSEEQEGLVVKSWSVMKKDAASLGLKFFLKIFEIAPSAKKLFPFLRESNVPVEKHSKLKPHAMAVFLMTCESAVQLRKSGKVTVRESSLKKLGAVHSKY GVADEHFEVTKFALLETIKEAVGEMWSADMKNAWGEAYDQLVTAIKSEMKSN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G16060		ATGLB1, ARATHGL...	CLASS I HEMOGLOBIN, hemoglobin...		Lus10005467 [exp]	0	1
AT5G59350			unknown protein		Lus10004955 [exp]	7.6	0.9529
AT5G37830		OXP1	oxoprolinase 1 (.1)		Lus10024411 [exp]	9.5	0.9225
AT5G50120			Transducin/WD40 repeat-like su...		Lus10034117 [exp]	9.7	0.9100
AT3G17860	ZIM	TIFY6B, JAI3, J...	JASMONATE-INSENSITIVE 3, jasmo...		Lus10031333 [exp]	10.6	0.9490
AT1G74920		ALDH10A8	aldehyde dehydrogenase 10A8 (....		Lus10043470 [exp]	10.8	0.9052
AT2G19860		ATHXK2	ARABIDOPSIS THALIANA HEXOKINAS...		Lus10012946 [exp]	11.2	0.9521
AT4G40050			Protein of unknown function (D...		Lus10012756 [exp]	11.6	0.9018
AT3G26330		CYP71B37	"cytochrome P450, family 71, s...		Lus10019159 [exp]	14.7	0.9232
AT3G05550			Hypoxia-responsive family prot...		Lus10029883 [exp]	18.9	0.9492
AT5G24600			Protein of unknown function, D...		Lus10013947 [exp]	19.8	0.9409

Compare expression of checked genes

Lus10005467 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.