Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G72250 1083 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT2G22610 699 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 523 / 2e-171 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G73860 339 / 7e-100 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G47500 338 / 7e-100 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT5G41310 331 / 3e-97 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT5G27000 327 / 8e-96 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT1G18410 329 / 2e-95 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G63640 327 / 3e-95 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) AT3G44730 310 / 5e-89 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013714 [exp] 2057 / 0 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10035954 [exp] 707 / 0 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10025708 [exp] 687 / 0 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10029914 [exp] 511 / 1e-166 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10004487 [exp] 509 / 2e-165 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029865 [exp] 332 / 2e-97 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10009851 [exp] 328 / 4e-96 AT2G47500 1245 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Lus10015212 [exp] 324 / 3e-95 AT5G27000 924 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10032897 [exp] 323 / 3e-93 AT3G44730 1302 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G140000 [exp] 1348 / 0 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G436200 [exp] 1338 / 0 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.002G110600 [exp] 716 / 0 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.013G020700 [exp] 527 / 9e-173 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G030271 [exp] 525 / 3e-172 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G011500 [exp] 329 / 4e-96 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Potri.005G021100 [exp] 329 / 5e-96 AT2G47500 1051 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.014G125700 [exp] 328 / 6e-96 AT2G47500 1218 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.001G467600 [exp] 326 / 2e-94 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.002G201000 [exp] 322 / 8e-94 AT2G47500 1237 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0202 [flax] [poplar] GBD PF11721 [flax] [poplar] Malectin Malectin domain
Representative CDS sequence Show only first row Show all	>Lus10005582 pacid=23139674 polypeptide=Lus10005582 locus=Lus10005582.g ID=Lus10005582.BGIv1.0 annot-version=v1.0 ATGGCGGATCCGGTTTCTTCTACTTCTCCTTCATGTCCTTCTTTCTCCAACGGCCGATCTTTGCTAGGGTTTTCTTTGAGTTCTCCTGATCTGGTTATAT GCGCTGGTTCACCTGAAATGGAGAGCAACATTTGTGGATGTTCCCCGGAAATTGTAGGTAGTAGGAAGAAGCAGTGTATGGATCTCTCGTTAGACAACGG CATTGCTGGCTATGAATCTGGTGCCAGAGAAACCAGTAGATCTGTTAAATTCTCCCCTTTTTGTCAAACATTTTACAATAAGGAATTGTCTCCTGAGTCA TCCATCGAGCTCCTTGCCCGTCCAGTGAAGGGAGAGCAAATTGTGGGAGATGTTCTTCCTGCGTCTGCGGGGATAACCATCAATGTGGGATGCACTGATG ATCAGACTGTGACTAAGGATGGTTTGAGCTATATGAAGGATAGTTGTTTCCTTGGTGGTGATACTGTGAGGACTAATGCCATAATTGGTGATGGACTAGA TGAGGATGAGAGCCTTTGTCTATACCAAACAGCTCGGATGGGTGACTTCTCGTACTGTTTTCGGTCATTGGAGCCAGGGGATTACGATGTTGCTCTTCAC TTTGCAGAGATAGTGTTTACCAATGGGCCTCCAGGGTTAAGGGTGTTTGACGTTTTTCTGCAAGAAAAGAAGGTCGTTTCCAATTTAGACATCTTTGCTC GAGTAGGAGCAAACAATCCTTTGGTTCTATCCGACCTCAAAGCTTCTGTTGGATTGGGTGAAAAATTATCGATTAGATTAGAAGGTGTAACGGGTACACC GATTCTATGTGCAATTTCAGTTGCAAAGGATGATTCTGCTAGTACTGGAGAAGCTTCGTTTCCTGAGCATATAAAAAGGTCCCAAGCAGCAGAAATTGAG TCACAGAAAAATGCTGACTGTGAGATGGAAGATGATTATCAGAAGCTGTTGACTGCTTATGAATGTCAGCAACGGGAACTAACGGAGATGAGAAAGATAG TAGAGGAACTTAATAGGGAGAACCAGGTAAAAACTAAAGAGTGCCAAAATGCGTTGAAGACTTTGCAGGACCTCCAAAGCGAGTTGATGCGGAAGTCTAT GCATGTAGGCTCATTAGCTTTTGCTGTTGAGGGGCAAGTCAAAGAGAAGAGTAGGTGGTTCTCAGCACTGAAAGACTTGACAGAAAAAATAGAGATGATG AAAGGGGACCAAATCAAGCTATCTGAGGAAGCTAGGTCATATAAAGCTTGTTTCGGGGAAATGAGCGAGATTGCATCTACCATTCAGTCCACAATGAAAC AGCAATCCGGTTTGCATGGAGATCTTATGAAGAAATTCATGGAAGGAGTCAGAGAACGGAAGGAACTATATAACAAGGTGTTAGAACTGAAAGGAAATAT AAGGGTCTTTTGCAGGTGTAGGCCTTTGAATAGTGAAGAAATTGCAGCAGGAGCTGCAATGGCTATTGATTTTGAATCAGCTAAAGATGGAGAACTTACT GTTTTCTCAAATGGGGTTCCAAGAAAGACCTTCAAGTTCGACTCCATTTTCAGCCCTCAAGCAAACCAAGCTGATGTCTTTGAAGATACAGCCGCATTTG CAACCTCAGTGTTGGACGGTTACAACGTGTGCATATTTGCTTATGGGCAGACCGGAACTGGAAAAACGTTTACAATGGAAGGCACAAAAGAGGCTCGTGG AGTGAATTATAAAACTCTGAATGAATTGTTTCACATGATAAAGGAGCGGGAGAAAATTTTCAAATATGAAGTATCAGTGAGTGTCTTAGAAGTTTACAAT GAGCAAATACGGGATTTGCTCGTCTCAAACTCACAGCCAGCAACTGTGAAAAGGCTAGAAATAAGACCAGCAGGAGATGGACTGCATTGTGTTCAAGGTT TGGTTGAAGCACGTGTAAACAATGTAAATGAAGCCTGGGAAGTTTTACAGACTGGTAGCAATGCCAGGGCTGTCGGTTCAACCAGTGCAAATGATCACAG CAGCAGGTCTCATTGCATACACTGTGTGATGGTCAAGGGGGAGAATCTGTTAAATAAGGAATGCACGAGGAGCAAATTATGGTTGGTAGACCTAGCTGGA AGCGAGCGAGTGGCGAAAACAGAAGTCCAAGGAGAGAGATTAAAGGAAACTCAGAATATCAATAGATCATTGTCGGCATTAGGGGACGTCATATTCTCTC TTGCAACTAAGAGCCCTCATATTCCCTTCAGGAATTCGAAGCTGACCCATTTGCTTCAAGATTCTTTAGGAGGAGATTCAAAAGCACTTATGTTTGTACA GATCAGCCCAAACGAGAGTGACCTAAGCGAAACACTATGCTCGTTGAACTTTGCAAGCAGGGTTCGGGGCATAGAGTTGGGCCCTGCAAAGAGACAATTT GACATGCCTGAGCTTGTAAGATATAAACAACTGGCTGAGAAAACTAGACAAGAGTTGAAGCTCAAAGATGTTCAAATAAGAAAGATGGACGATACGGTCC AAGGACTGGAGCTGAAGGTCAAAGAGAAGGACATAAAGAACAAACATTTGCAGGAAAAGATAAAGGAGCTGGAGTCCCAACTGCTAGTTGAAAGGAAGCT GGCACGTCAGCATGTGGACACAAAGATTGCTGAGCAGCATTCGAAACAATCAGATGATCAAACTTGTCCCCCACCAAGACCGCCACTTGGAACTCGGTTA TTAGGGAATAGTAGTAACAAGGCTTCTTCAAATGGATCTGCAAATGTTGCATTGAACAAGGAAACAATGGATGCTGAGAACTTCCTTCCCTCGACGGATG TCATCTTCAAGATCCCCGACCCTATGGAGAAGGAAAACAATCCTGACATGGCTGAGAATCTGGGAATGCAAAAGAGAACAACTGGCAGGTTCTCAATTTG TCCAGCTCCTAGAAGAAACTCACTCATTCCGTTCTCAAGTCCATCGCCATTACCATTATTACCAGTTTCTCTGAATCAAGATGCAGAGAAAGGAGTGTGT GAAAGTCAGAAAGAAGGGAAAACCGGGACCAGGAAGCGAAATAGCGTGCTGAGACGAAGCGTGCATAAAAAGTTGCAGAGCAGATCGCCAATGCAGCAGC AGATTGCAAGGAAAGGAGGGATAAATGTCGGGATGGAGAAGGTGAGATTATCGATAGGAAGTCGAGGGAGGATGGCGCAGAGAGTGGTGCTGCACGGAAG TGCTGCAGCGAAGAGGGTAGTAAGTAAGGAGATCACAACACAGCAGAAGCAAGTGAGCCATAAGGAGAAGGAAAGAGGATGGAATAATGCAACAACAACG GCAAGGTTGTGA
AA sequence Show only first row Show all	>Lus10005582 pacid=23139674 polypeptide=Lus10005582 locus=Lus10005582.g ID=Lus10005582.BGIv1.0 annot-version=v1.0 MADPVSSTSPSCPSFSNGRSLLGFSLSSPDLVICAGSPEMESNICGCSPEIVGSRKKQCMDLSLDNGIAGYESGARETSRSVKFSPFCQTFYNKELSPES SIELLARPVKGEQIVGDVLPASAGITINVGCTDDQTVTKDGLSYMKDSCFLGGDTVRTNAIIGDGLDEDESLCLYQTARMGDFSYCFRSLEPGDYDVALH FAEIVFTNGPPGLRVFDVFLQEKKVVSNLDIFARVGANNPLVLSDLKASVGLGEKLSIRLEGVTGTPILCAISVAKDDSASTGEASFPEHIKRSQAAEIE SQKNADCEMEDDYQKLLTAYECQQRELTEMRKIVEELNRENQVKTKECQNALKTLQDLQSELMRKSMHVGSLAFAVEGQVKEKSRWFSALKDLTEKIEMM KGDQIKLSEEARSYKACFGEMSEIASTIQSTMKQQSGLHGDLMKKFMEGVRERKELYNKVLELKGNIRVFCRCRPLNSEEIAAGAAMAIDFESAKDGELT VFSNGVPRKTFKFDSIFSPQANQADVFEDTAAFATSVLDGYNVCIFAYGQTGTGKTFTMEGTKEARGVNYKTLNELFHMIKEREKIFKYEVSVSVLEVYN EQIRDLLVSNSQPATVKRLEIRPAGDGLHCVQGLVEARVNNVNEAWEVLQTGSNARAVGSTSANDHSSRSHCIHCVMVKGENLLNKECTRSKLWLVDLAG SERVAKTEVQGERLKETQNINRSLSALGDVIFSLATKSPHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNESDLSETLCSLNFASRVRGIELGPAKRQF DMPELVRYKQLAEKTRQELKLKDVQIRKMDDTVQGLELKVKEKDIKNKHLQEKIKELESQLLVERKLARQHVDTKIAEQHSKQSDDQTCPPPRPPLGTRL LGNSSNKASSNGSANVALNKETMDAENFLPSTDVIFKIPDPMEKENNPDMAENLGMQKRTTGRFSICPAPRRNSLIPFSSPSPLPLLPVSLNQDAEKGVC ESQKEGKTGTRKRNSVLRRSVHKKLQSRSPMQQQIARKGGINVGMEKVRLSIGSRGRMAQRVVLHGSAAAKRVVSKEITTQQKQVSHKEKERGWNNATTT ARL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G72250			Di-glucose binding protein wit...		Lus10005582 [exp]	0	1
AT1G72250			Di-glucose binding protein wit...		Lus10013714 [exp]	1.0	0.9902
AT2G36200			P-loop containing nucleoside t...		Lus10014216 [exp]	1.4	0.9843
AT3G06030		AtANP3, MAPKKK1...	NPK1-related protein kinase 3 ...		Lus10034060 [exp]	6.5	0.9632
					Lus10037590 [exp]	6.7	0.9651
AT2G31320		ATPARP2	poly(ADP-ribose) polymerase 2 ...		Lus10033871 [exp]	6.8	0.9428
AT5G18700		RUK, EMB3013	RUNKEL, EMBRYO DEFECTIVE 3013,...		Lus10012799 [exp]	7.5	0.9645
AT5G05940		ATROPGEF5, ROPG...	ROP guanine nucleotide exchang...		Lus10040248 [exp]	8.7	0.9574
AT5G27550			P-loop containing nucleoside t...		Lus10004487 [exp]	9.2	0.9633
AT3G27330			zinc finger (C3HC4-type RING f...		Lus10022324 [exp]	9.9	0.9575
AT5G51600		ATMAP65-3, PLE	PLEIADE, ARABIDOPSIS THALIANA ...		Lus10037691 [exp]	10.2	0.9617

Compare expression of checked genes

Lus10005582 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.