Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10010 432 / 1e-150 unknown protein AT5G64910 293 / 1e-95 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006823 [exp] 604 / 0 AT5G10010 476 / 1e-168 unknown protein Lus10006744 [exp] 123 / 1e-34 AT5G10010 115 / 9e-32 unknown protein Lus10020079 [exp] 54 / 1e-07 AT4G05120 392 / 7e-135 FUDR RESISTANT 1, EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3, Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G083700 [exp] 461 / 1e-163 AT5G10010 363 / 5e-124 unknown protein Potri.007G082000 [exp] 443 / 2e-156 AT5G10010 388 / 8e-134 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10005778 pacid=23174730 polypeptide=Lus10005778 locus=Lus10005778.g ID=Lus10005778.BGIv1.0 annot-version=v1.0 ATGAGGAAAGGAGCTAAGAGAAAGCGGGTACAGAAGGAGAACGGCAAAGATAAGGAAGCTTCTACGACTTCTGCTCCGGCGGCGGCGGAGGCGAACGAGG CTCCTCCTGCTAAGCCCGGTTCTGCTCGAGCTAAACGGCCCAAAGAAGAGGCGGAGTATTTCGAGGAGAAACGGAATCTGGAGGATTTGTGGAAGGCTGT TTTCCCGGTTGGGACAGAGTGGGATCAATTGGACGTTATGTACAACAAGTACAATTGGGATTTTTTGAACCTGGAAGAAGCTTTTGAAGAAGGTGGAGTT CTGCATGGGAAGAAAGTTTATCTTTTTGGTACTACTGAACCTCAATTGGTACCTTACAAAGGGGATAGCAAAATAATCAATGTACCTACGATTGTGGCAG TGAGCATTCCTTATACAATCTCATTTTGCAGCAGGCACTTGGATATTGTTCCTTCACCTTTTCCACCATCAGATAAGATCGGTATCAATTCAGTTCAAAG GGAAGCTGAAGAAATAGTTCCTATGAAGCAAATGAAGATGGACTGGGTTCCATACATTCCGATGGAGAACAGGGACACAGAGGTTCTTAGATTAAAATCT CAAATATTCATCTTGAGCTGTACTCAAAGAAGAAGCGCATTGAGACATATGAAGGAAGAACGCCTTAAGAAATTTGAATACTGCCTTCCATACTTCTATA ATCCACTTAAGGAAGATGATTTTGAACAAAGCACTGAGGTCCAAATTTTTTTCCCAGCAGAGGACAAGCCGCCGCTTTTCTGTGAGTTTGATTGGTCAAT GGACGAGCTTGAGGAATTCACTGATAATCTGATCACGGAGGAGGCACTATCTGAAGATCAGAAGGACGCCTTCAAGGAGTTTGTGAAAGAGAAAGTTCGA GACGCGAAGAAAGCTAATCGAGAGGCTAGGGAAGCAAGGAAAAAGGCAAGGGAAGATCTGAGTGAAGAAACAAAAACTGCATTTGAGAAAATGACCTTCT ACAAATTCTACCCTAAGAAGACTGAAGACTCCCCTGATGTTTCTTCTGTCAAGTCGCCTTTCATCAACCGATATTACGGGAAGGCTCATGAGGTCCTATA G
AA sequence Show only first row Show all	>Lus10005778 pacid=23174730 polypeptide=Lus10005778 locus=Lus10005778.g ID=Lus10005778.BGIv1.0 annot-version=v1.0 MRKGAKRKRVQKENGKDKEASTTSAPAAAEANEAPPAKPGSARAKRPKEEAEYFEEKRNLEDLWKAVFPVGTEWDQLDVMYNKYNWDFLNLEEAFEEGGV LHGKKVYLFGTTEPQLVPYKGDSKIINVPTIVAVSIPYTISFCSRHLDIVPSPFPPSDKIGINSVQREAEEIVPMKQMKMDWVPYIPMENRDTEVLRLKS QIFILSCTQRRSALRHMKEERLKKFEYCLPYFYNPLKEDDFEQSTEVQIFFPAEDKPPLFCEFDWSMDELEEFTDNLITEEALSEDQKDAFKEFVKEKVR DAKKANREAREARKKAREDLSEETKTAFEKMTFYKFYPKKTEDSPDVSSVKSPFINRYYGKAHEVL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G10010			unknown protein		Lus10005778 [exp]	0	1
AT3G16490		IQD26	IQ-domain 26 (.1)		Lus10043033 [exp]	3.3	0.9285
AT5G49665			Zinc finger (C3HC4-type RING f...		Lus10028224 [exp]	3.9	0.9170
AT5G56740		HAG02, HAC7, HA...	histone acetyltransferase of t...		Lus10012916 [exp]	4.9	0.9196
AT3G18020			Pentatricopeptide repeat (PPR)...		Lus10024513 [exp]	13.0	0.9010
AT5G06750			Protein phosphatase 2C family ...		Lus10021056 [exp]	13.2	0.8433
AT2G40550		ETG1	E2F target gene 1 (.1)		Lus10030540 [exp]	13.6	0.9059
AT4G11610		NTRB, ATNTRB	C2 calcium/lipid-binding plant...		Lus10031816 [exp]	14.4	0.9018
AT4G34460		ELK4, AGB1, ATA...	ERECTA-LIKE 4, GTP binding pro...		Lus10042325 [exp]	15.3	0.8790
AT3G28040			Leucine-rich receptor-like pro...		Lus10037276 [exp]	18.2	0.8898
AT5G49665			Zinc finger (C3HC4-type RING f...		Lus10028223 [exp]	19.0	0.8909

Compare expression of checked genes

Lus10005778 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.