Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040846 [exp] 96 / 5e-24 AT2G28780 680 / 0.0 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10005902 pacid=23176950 polypeptide=Lus10005902 locus=Lus10005902.g ID=Lus10005902.BGIv1.0 annot-version=v1.0 ATGATGATGAGAAACAGAGGCTCAGCTTTCTCCTCTGGCTTACTGCTGCTCTTCATCATCATAGCAGCCGCCGCCACTATAGCTCTCTCAGTGCCCTCTG CTCCGGTGAGGATCCGCCACCTGGCCGCTGCCAGAGTGTTGCTGCCAGAAGCTGATCAGCAAGAGATAGGGACCGACGACGTCGTATACACGAGGATTGG ATGGAAGAGACGAAGTAGATCCCCGGGATGGGGATCTGCTACGGTGGTCGAGTCTGTTCCTGCGTCCAACAAGGACGAAATAGACTCTTCTCCGGTCTCT ACGACCGCAACAACATCTCCTCCTCCTGGGTCGTTCGTTTAA
AA sequence Show only first row Show all	>Lus10005902 pacid=23176950 polypeptide=Lus10005902 locus=Lus10005902.g ID=Lus10005902.BGIv1.0 annot-version=v1.0 MMMRNRGSAFSSGLLLLFIIIAAAATIALSVPSAPVRIRHLAAARVLLPEADQQEIGTDDVVYTRIGWKRRSRSPGWGSATVVESVPASNKDEIDSSPVS TTATTSPPPGSFV

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10005902 [exp]	0	1
AT5G22860			Serine carboxypeptidase S28 fa...		Lus10005354 [exp]	6.2	0.8225
AT3G12340			FKBP-like peptidyl-prolyl cis-...		Lus10011649 [exp]	8.0	0.7092
AT3G47570			Leucine-rich repeat protein ki...		Lus10016896 [exp]	8.0	0.8200
					Lus10021407 [exp]	10.4	0.8121
					Lus10021406 [exp]	13.6	0.8114
AT2G47190	MYB	AtMYB2	myb domain protein 2 (.1)		Lus10009996 [exp]	15.8	0.7989
AT3G60290			2-oxoglutarate (2OG) and Fe(II...		Lus10018950 [exp]	16.1	0.7984
AT1G16130		WAKL2	wall associated kinase-like 2 ...		Lus10004504 [exp]	18.1	0.7971
AT5G05340			Peroxidase superfamily protein...		Lus10032786 [exp]	19.2	0.7885
AT3G49780		ATPSK3(FORMERSY...	phytosulfokine 4 precursor (.1...		Lus10011721 [exp]	19.5	0.7798

Compare expression of checked genes

Lus10005902 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.