Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G46550 183 / 2e-53 unknown protein AT1G01240 87 / 9e-19 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030237 [exp] 637 / 0 AT2G46550 273 / 3e-88 unknown protein Lus10012748 [exp] 42 / 0.0003 AT2G46550 57 / 6e-10 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G100300 [exp] 316 / 8e-104 AT2G46550 213 / 2e-64 unknown protein Potri.002G173200 [exp] 288 / 1e-93 AT2G46550 180 / 2e-52 unknown protein Potri.007G097400 [exp] 56 / 8e-09 AT2G46550 66 / 5e-13 unknown protein Potri.005G071400 [exp] 53 / 8e-08 AT2G46550 80 / 5e-18 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10005973 pacid=23175055 polypeptide=Lus10005973 locus=Lus10005973.g ID=Lus10005973.BGIv1.0 annot-version=v1.0 ATGGCAGCAGCTGAAGCAAGGGCTGTTTGGCAGAGAGCAGCTAATCGTTGCTTTGTTCAAGAGGATGCCAAGAGAGCTCCCAAGTTAGCTTGTTGCCAAT CCTCATCATCGTCGTCATCATCAAAAGAAGGACCAACTGGTGGTGGATCATCAGAAGCAGCTCCAACTGATCAATCTTTACCAGGTTTCATGCCGGTCAA CCGGAGCCCTTCATACTCGAATCTCCCACCTGATACAAGATGGTGGCTTCAGCTCCAGCCTTGCTATGGCTACCAAAAGTGCTTAACTTCCGACCAATTG AATGACTTAGAGGCTGAGATGGAGATCCTGAGATCGGAGGTTGGTAACTCCGACTCCAAACACTACTCGTTAGAAACTAACTCGGATAGTAGTAGTACTT GGATTGATGTCAAGAAGAGTTCCGAGTCGTCCCTTGATAAATCATCAATTGAGGTTGTTGAGGATTCACTTGGTGAAGTTTTGCTTCCAATTAAGAGCTA TGTGAGCAGTTTGGATGAGGTGGAATCTCCTTGGACTGGTGCCGGAAAGAACGTGCCGTGGTGGCGAATGGCTGATAAGGATGATTTGGCGTCGTTAGTT GCGCAGAAGTCGTTGGATTATATGGAGAACTGTGATCTCCCTCCTCCAAGGAAGATGCAGATCAAAGGGTACGATGGTTCATTGGCTCATTCCTTGGACT GGAAGAAACCTATCGGATGTGTCTCCGATCCACAACGAATGATTAGAGAAGGCGGTATTGATGTTGTCGGAGGAAGACAAAGTCATTCATCGGGTTCTTC CGACAAGTCATTCAGTCCCTCGACGACGATTAGAGATGTCGGCCAAGATCCAGAAACCGACCCGAGCAAGGCTCAGCTTCTCGAAGCGTTGTGTCATTCT CAAACACGAGCAAGAGAAGCCGAGAAGGCTGTGAAGCAAGCCTGTGCCGAAAAGGAGCATGTCATTATGCTCTTCTTCAAACAGGCTTCACAGCTCTTCG CATACAAGCAGTGGTTCCAGCTCCTGCAGCTCGAAACCATCTACCACGGTTTGAAGAACAACAGAGAGGAGCTGACCTCCACCCTATTCCCCGTAGCCCT CCCATGGATGCCTCCGAAAGGAAGTAAGAAACTGCGCAAAAAGAAGTCTGCGAAAGGCGGTAAGCGAGGGAAGAGGCAGGACGCTGTTGGTAAGTATGCC GTTGCTTTTGCTTTGGGGTTGGGTTTGGTTGGTACAGGGTTGCTTCTTGGATGGACTGTAGGGTGGATGCTGCCATTCTAG
AA sequence Show only first row Show all	>Lus10005973 pacid=23175055 polypeptide=Lus10005973 locus=Lus10005973.g ID=Lus10005973.BGIv1.0 annot-version=v1.0 MAAAEARAVWQRAANRCFVQEDAKRAPKLACCQSSSSSSSSKEGPTGGGSSEAAPTDQSLPGFMPVNRSPSYSNLPPDTRWWLQLQPCYGYQKCLTSDQL NDLEAEMEILRSEVGNSDSKHYSLETNSDSSSTWIDVKKSSESSLDKSSIEVVEDSLGEVLLPIKSYVSSLDEVESPWTGAGKNVPWWRMADKDDLASLV AQKSLDYMENCDLPPPRKMQIKGYDGSLAHSLDWKKPIGCVSDPQRMIREGGIDVVGGRQSHSSGSSDKSFSPSTTIRDVGQDPETDPSKAQLLEALCHS QTRAREAEKAVKQACAEKEHVIMLFFKQASQLFAYKQWFQLLQLETIYHGLKNNREELTSTLFPVALPWMPPKGSKKLRKKKSAKGGKRGKRQDAVGKYA VAFALGLGLVGTGLLLGWTVGWMLPF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G46550			unknown protein		Lus10005973 [exp]	0	1
AT2G15695			Protein of unknown function DU...		Lus10014042 [exp]	2.2	0.9108
AT2G23460		ATXLG1, XLG1	extra-large G-protein 1 (.1)		Lus10019655 [exp]	2.4	0.8815
AT1G03350			BSD domain-containing protein ...		Lus10012761 [exp]	3.9	0.8796
AT3G20860		ATNEK5	NIMA-related kinase 5 (.1)		Lus10011301 [exp]	4.2	0.8706
AT2G15695			Protein of unknown function DU...		Lus10019874 [exp]	5.3	0.8806
AT4G32190			Myosin heavy chain-related pro...		Lus10041037 [exp]	6.0	0.8833
AT2G15230		ATLIP1	lipase 1 (.1)		Lus10002808 [exp]	6.3	0.8550
AT2G16530			3-oxo-5-alpha-steroid 4-dehydr...		Lus10041820 [exp]	6.5	0.8419
AT1G30540			Actin-like ATPase superfamily ...		Lus10038542 [exp]	8.8	0.8571
AT3G27010	TCP	ATTCP20, PCF1, ...	ARABIDOPSIS THALIANA TEOSINTE ...		Lus10035193 [exp]	11.0	0.8493

Compare expression of checked genes

Lus10005973 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.