Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025237 [exp] 87 / 1e-20 AT2G38510 640 / 0.0 MATE efflux family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10006101 pacid=23174776 polypeptide=Lus10006101 locus=Lus10006101.g ID=Lus10006101.BGIv1.0 annot-version=v1.0 ATGTGCACCGGAAGTGGTGCTGAATCTCGAGGAGCAGGAGGAGGAGGAGGAGGAGGAATTATAAATAGTGACAATTGGATATCCAAAGCTGCTGATGGTG ATCAAGATGATGGGGAGGCCGAATATCAGGATCATCATCTTATTTCTGTTGTGTCAGAGTCATCAATGAAATCAAGAACCACCGGCGGCGGCGGCGGCGG CGAAGCTAGTAAGTTGTTCCATGGTATCATCCGCCGCCTTCCCCTCAATGCCCACCTCGGAAAGCTCCCTCTACACGAGAGTTCAGATAGGGTGGAAAGG AAGTGGAAGAATGGTGGGGGGGAAGGGGTTAAGTTAAAAAAGAGTAATAATAAAGTACCAGGCAAAGAGAAAGAGAGCTAG
AA sequence Show only first row Show all	>Lus10006101 pacid=23174776 polypeptide=Lus10006101 locus=Lus10006101.g ID=Lus10006101.BGIv1.0 annot-version=v1.0 MCTGSGAESRGAGGGGGGGIINSDNWISKAADGDQDDGEAEYQDHHLISVVSESSMKSRTTGGGGGGEASKLFHGIIRRLPLNAHLGKLPLHESSDRVER KWKNGGGEGVKLKKSNNKVPGKEKES

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10006101 [exp]	0	1
AT3G26040			HXXXD-type acyl-transferase fa...		Lus10021392 [exp]	22.6	0.7094
AT3G16210			F-box family protein (.1)		Lus10018008 [exp]	23.0	0.6719
AT1G32100		ATPRR1	pinoresinol reductase 1 (.1)		Lus10012147 [exp]	28.4	0.6979
AT2G27920		SCPL51	serine carboxypeptidase-like 5...		Lus10035555 [exp]	45.5	0.7037
AT3G55150		ATEXO70H1	exocyst subunit exo70 family p...		Lus10040331 [exp]	85.2	0.5972
AT3G03000			EF hand calcium-binding protei...		Lus10004610 [exp]	98.2	0.6039
AT2G23540			GDSL-like Lipase/Acylhydrolase...		Lus10016918 [exp]	98.7	0.6502
AT1G49960			Xanthine/uracil permease famil...		Lus10006134 [exp]	113.0	0.6520
AT5G35370			S-locus lectin protein kinase ...		Lus10028067 [exp]	123.2	0.6477
					Lus10033046 [exp]	125.1	0.5924

Compare expression of checked genes

Lus10006101 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.