Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22360 151 / 2e-43 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22380 149 / 1e-42 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22370 141 / 4e-41 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22400 142 / 4e-40 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22340 141 / 1e-39 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G78270 128 / 7e-35 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT3G46660 98 / 7e-24 UGT76E12 UDP-glucosyl transferase 76E12 (.1) AT5G59590 97 / 2e-23 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT5G59580 96 / 4e-23 UGT76E1 UDP-glucosyl transferase 76E1 (.1) AT5G05880 96 / 5e-23 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041055 [exp] 204 / 2e-63 AT1G22360 610 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10031388 [exp] 163 / 6e-48 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013923 [exp] 158 / 5e-46 AT1G22400 537 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013919 [exp] 152 / 1e-45 AT1G22380 318 / 2e-106 UDP-glucosyl transferase 85A3 (.1) Lus10024583 [exp] 156 / 2e-45 AT1G22380 598 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10000993 [exp] 156 / 4e-45 AT1G22380 563 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032220 [exp] 154 / 3e-44 AT1G22380 601 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013920 [exp] 152 / 6e-44 AT1G22400 488 / 3e-170 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10010943 [exp] 154 / 2e-43 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G313000 [exp] 174 / 2e-52 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098300 [exp] 161 / 4e-47 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 160 / 5e-47 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 159 / 2e-46 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 159 / 3e-46 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098400 [exp] 158 / 6e-46 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 157 / 9e-46 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 155 / 3e-45 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.006G022300 [exp] 154 / 2e-44 AT1G22360 518 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.006G023151 [exp] 152 / 8e-44 AT1G22400 521 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10006169 pacid=23148537 polypeptide=Lus10006169 locus=Lus10006169.g ID=Lus10006169.BGIv1.0 annot-version=v1.0 ATGGAACACCTCGGAGCCGCTGTCAAGAGGCACCAGCCGACCAATGATTTCCTTCTTGACTTGCTTCCGGCGCCGACTCCTCAACTTCATGAAGAAACTA CCAGTGGTGCTGCGGCTCGCTCTAGCGAAGTTGCTCCGAAGCTGCTGCCTGCTGGTACTTACCGGATTGATGATTTCTTCGATAAATCGACGAGCAGGGC TTCTACTTCAGATGAGAATCAAGGCGAATCGGCTCTGCTTCCCGAGGAATTCGTGACGAAGACAAGGGATAGTGGGATGCTGGCCAGCTGGTGTCCGCAG GAGGAGGTGCTCAAGCATCCTGCTATCGGAGGATTCCTGAGCCACATGGGGTGGAACTTGACTCTGGACAGCGTGTGTAATGGCGTGCCGATGGTTTGCT GGCTGTTCTTCGCGGAGCAGCAGACGAATTGCTTGTTCGCTTGCAACATGTGGGGGATTGGGACGGAGATCGACAGTGATGTGAAGCGAGGGGAAGTGGA GGAGCGGGTGAGAGAGTTGATGGAAAGAGGGAAAGGGAAGGAGATGAAGTTGAAGGCGGAGGAGTGGAAGAAGTTGGTGGTGGCAGTGACACAGCCTGAC GGGTCTTCCTGA
AA sequence Show only first row Show all	>Lus10006169 pacid=23148537 polypeptide=Lus10006169 locus=Lus10006169.g ID=Lus10006169.BGIv1.0 annot-version=v1.0 MEHLGAAVKRHQPTNDFLLDLLPAPTPQLHEETTSGAAARSSEVAPKLLPAGTYRIDDFFDKSTSRASTSDENQGESALLPEEFVTKTRDSGMLASWCPQ EEVLKHPAIGGFLSHMGWNLTLDSVCNGVPMVCWLFFAEQQTNCLFACNMWGIGTEIDSDVKRGEVEERVRELMERGKGKEMKLKAEEWKKLVVAVTQPD GSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10006169 [exp]	0	1
AT1G54570			Esterase/lipase/thioesterase f...		Lus10033848 [exp]	4.5	0.7815
AT1G29395		COR413IM1, COR4...	cold regulated 414 thylakoid m...		Lus10004547 [exp]	8.5	0.7643
AT3G55240			Plant protein 1589 of unknown ...		Lus10003293 [exp]	10.2	0.7817
AT3G22210			unknown protein		Lus10003811 [exp]	10.6	0.8200
AT2G41530		ATSFGH	ARABIDOPSIS THALIANA S-FORMYLG...		Lus10035437 [exp]	14.3	0.7757
AT3G01910		AT-SO, ATSO, SO...	sulfite oxidase (.1.2.3)		Lus10012532 [exp]	14.5	0.7678
AT1G55205			unknown protein		Lus10023655 [exp]	17.9	0.7367
					Lus10019515 [exp]	19.2	0.7895
AT3G05870		APC11	anaphase-promoting complex/cyc...		Lus10031549 [exp]	20.9	0.7753
AT5G10310			unknown protein		Lus10025740 [exp]	24.1	0.7526

Compare expression of checked genes

Lus10006169 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.