Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G10050 529 / 0 esterase/lipase/thioesterase family protein (.1) AT2G26740 44 / 8e-05 ATSEH soluble epoxide hydrolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041054 [exp] 558 / 0 AT4G10050 429 / 3e-150 esterase/lipase/thioesterase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G072900 [exp] 563 / 0 AT4G10050 555 / 0.0 esterase/lipase/thioesterase family protein (.1) Potri.013G099900 [exp] 544 / 0 AT4G10050 549 / 0.0 esterase/lipase/thioesterase family protein (.1) Potri.016G077066 [exp] 48 / 1e-06 AT3G52570 173 / 1e-53 alpha/beta-Hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00561 [flax] [poplar] Abhydrolase_1 alpha/beta hydrolase fold
Representative CDS sequence Show only first row Show all	>Lus10006170 pacid=23148531 polypeptide=Lus10006170 locus=Lus10006170.g ID=Lus10006170.BGIv1.0 annot-version=v1.0 ATGGATTCATCATCGAACTTGAGTCCACTTGCAGAGGAGAGATCAGGAGACGAGCTCCGAAGTCCTCAGAGACAAGACGATGAAACCCCAAAGCCCCCGG TCTCTGCTTTTGCCTCCATTCCTGATCGCCCTGCCTCCCAGAGCTCATTACAAAAATTCGCACCCATAGACTGGAAAGAATTCTTTGACCGAGAGGAAGA TATCCACATTCCTAATACAGAGGACGTATTTCATGTATATCTCGCAGGATCTGATGGGCCGGTTGTTTTCTGTCTACACGGAGGTGGTTATTCTGGGCTT TCTTTTGCCCTATCAGCTGTTCAAATTAAAGAGAAAGCTCGCATTGTTGCAATGGACATGAGAGGACATGGAAAGACCGTCACAGAGAATGATCTTGACC TGTCCATCGAGACATTGTGCAAAGATGTTCTTGCTGTTGTGACTGCAATGTTTGGCAGTTCTCGTCCAGCAATTATATTCGTAGGCCACAGCATGGGTGG GTCTGTCGCTGTCCATGTTGCTGCAAAGAAGTTGATTCCTCACTTGGCGGGCCTGGTTGTTGTTGACGTCGTAGAGGGGACTGCGATTGCTTCACTAGCT CACATGCAGAAGATCCTTTCATGCAGGATGCAGCATTTCCCAACTGTTGAAAAGGCAATAGAATGGAATGTTAAAGGAGGTTCTTTACGAAATATTGATT CTGCTCGAGTATCTATTCCTACAACACTAAAGTATGATGATGCCAGGAAATGCTATGTTTATCGAGCGCGGCTAATGGAAACTGAACAATACTGGAGAGG ATGGTATGAGGGTCTTTCCGAAAAGTTCTTGTCATGTCCAGTTCCGAAGCTATTGCTTTTAGCAGGAGCGGACAGATTGGACAAGGTCCTCACTATCGGC CAAATGCAAGGGAAGTTCCAAATGGTAGTTGTTAGACATACAGGGCATGCGATCCAGGAGGATGTGCCGGATGAATTCGCGACTTTGATAGTCAATTTCA TATCTCGCAACCGCATAGGTCCTAACGGAGTCGAGGTCAGTGCTGTTCCTTCTGGTTTGTTTTCCCCACAGCAAGCTCTGGCTGTCTTGGTTGGTTGA
AA sequence Show only first row Show all	>Lus10006170 pacid=23148531 polypeptide=Lus10006170 locus=Lus10006170.g ID=Lus10006170.BGIv1.0 annot-version=v1.0 MDSSSNLSPLAEERSGDELRSPQRQDDETPKPPVSAFASIPDRPASQSSLQKFAPIDWKEFFDREEDIHIPNTEDVFHVYLAGSDGPVVFCLHGGGYSGL SFALSAVQIKEKARIVAMDMRGHGKTVTENDLDLSIETLCKDVLAVVTAMFGSSRPAIIFVGHSMGGSVAVHVAAKKLIPHLAGLVVVDVVEGTAIASLA HMQKILSCRMQHFPTVEKAIEWNVKGGSLRNIDSARVSIPTTLKYDDARKCYVYRARLMETEQYWRGWYEGLSEKFLSCPVPKLLLLAGADRLDKVLTIG QMQGKFQMVVVRHTGHAIQEDVPDEFATLIVNFISRNRIGPNGVEVSAVPSGLFSPQQALAVLVG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G10050			esterase/lipase/thioesterase f...		Lus10006170 [exp]	0	1
AT5G15070			Phosphoglycerate mutase-like f...		Lus10032191 [exp]	9.3	0.8216
AT5G18420			unknown protein		Lus10008554 [exp]	11.8	0.8801
AT3G28860		ABCB19, ATMDR11...	P-GLYCOPROTEIN 19, MULTIDRUG R...		Lus10033470 [exp]	13.2	0.8523
AT3G55020			Ypt/Rab-GAP domain of gyp1p su...		Lus10041425 [exp]	14.3	0.8438
AT5G55300		MGO1, TOP1BETA,...	TOPOISOMERASE 1, MGOUN 1, DNA ...		Lus10043175 [exp]	15.1	0.8771
AT5G24670		TAD3, EMB2820	tRNA adenosine deaminase 3, EM...		Lus10016480 [exp]	18.0	0.8116
AT5G27620		CYCH;1	cyclin H;1 (.1)		Lus10037811 [exp]	19.3	0.8783
AT2G32000			DNA topoisomerase, type IA, co...		Lus10035035 [exp]	19.6	0.8074
AT2G39810		HOS1	HIGH EXPRESSION OF OSMOTICALLY...		Lus10010990 [exp]	24.0	0.8701
AT5G62050		ATOXA1, OXA1AT,...	HOMOLOG OF YEAST OXIDASE ASSEM...		Lus10001639 [exp]	25.3	0.8265

Compare expression of checked genes

Lus10006170 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.