Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G26710 325 / 7e-101 CYP72B1, CYP734A1, BAS1 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) AT1G75130 314 / 8e-97 CYP721A1 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) AT3G14610 308 / 2e-94 CYP72A7 "cytochrome P450, family 72, subfamily A, polypeptide 7", cytochrome P450, family 72, subfamily A, polypeptide 7 (.1) AT3G14680 299 / 5e-91 CYP72A14 "cytochrome P450, family 72, subfamily A, polypeptide 14", cytochrome P450, family 72, subfamily A, polypeptide 14 (.1) AT2G46960 297 / 2e-90 CYP709B1 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) AT3G14640 294 / 3e-89 CYP72A10 "cytochrome P450, family 72, subfamily A, polypeptide 10", cytochrome P450, family 72, subfamily A, polypeptide 10 (.1) AT3G14690 293 / 6e-89 CYP72A15 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1) AT3G14630 291 / 2e-88 CYP72A9 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) AT3G14660 290 / 1e-87 CYP72A13 "cytochrome P450, family 72, subfamily A, polypeptide 13", cytochrome P450, family 72, subfamily A, polypeptide 13 (.1) AT3G14650 290 / 2e-87 CYP72A11 "cytochrome P450, family 72, subfamily A, polypeptide 11", cytochrome P450, family 72, subfamily A, polypeptide 11 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036942 [exp] 1377 / 0 AT2G26710 375 / 2e-119 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036817 [exp] 694 / 0 AT2G26710 382 / 3e-121 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036820 [exp] 663 / 0 AT2G26710 397 / 2e-133 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036822 [exp] 486 / 1e-160 AT2G26710 410 / 4e-137 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10004633 [exp] 452 / 3e-149 AT2G26710 378 / 4e-126 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10026085 [exp] 441 / 9e-145 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10026084 [exp] 422 / 1e-137 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036818 [exp] 418 / 3e-136 AT2G26710 369 / 2e-122 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10017775 [exp] 421 / 5e-136 AT3G14630 359 / 2e-117 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G139200 [exp] 486 / 2e-162 AT2G26710 369 / 6e-123 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139400 [exp] 484 / 6e-162 AT2G26710 402 / 2e-135 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139300 [exp] 479 / 1e-159 AT2G26710 372 / 1e-123 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139600 [exp] 463 / 1e-153 AT2G26710 395 / 6e-133 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.019G071200 [exp] 459 / 7e-152 AT2G26710 346 / 9e-114 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.019G014407 [exp] 458 / 1e-151 AT2G26710 389 / 3e-130 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.006G154500 [exp] 331 / 8e-103 AT2G26710 789 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.018G070900 [exp] 330 / 2e-102 AT2G26710 796 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.002G134500 [exp] 323 / 2e-99 AT1G75130 540 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Potri.005G035200 [exp] 318 / 4e-98 AT1G75130 547 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [flax] [poplar] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Lus10006245 pacid=23139680 polypeptide=Lus10006245 locus=Lus10006245.g ID=Lus10006245.BGIv1.0 annot-version=v1.0 ATGAGATCACAAGGGATCAAAGGCCCCCCTTACACATTCTTCCATGGCAACACCAGAGAGATAGCACATATGAGAATTCAAGCTACACAGACCCCCATGG TGGGCTTGTCCACTAACCATATCTTTCCAAGACTCCAGCCTCACATTTACACTTGGACCGCGCTTTATGGGAAGAACTATTTGCAGTGGTATGGCAGCAG GCCACAACTTGTAGTCACTGAACCAGAGCTAATAAGAGAAGTGCTCACCACCAGAGATGGAGCTTACGAGAAGCATGCATTTCAACCTCTCTTTAAAATC ATGCTAGGGGATGGACTCGTTGTCTCTAGAGGTGAGAAATGGACCAAGATGCGCAGGCTTGCGAACCATGCCTTCCATGGAGAAAGCTTGAAGGGTATGG TTCCGGCCATGATCTCGAGCGTCGAGATGATGCTGGAGAGGTGGAAGAAGATGAATCATGGTGAAGACCGGAGGATAGAGATTGATGCATCTCAGGAGTT GAGAATCCTGACAGCAGAGACCATATCCATGACAGCTTTTGGGAGCAGCTACTTGGAAGGACAGAAGGTTTTCGAGCTGCTGACTAAGATGGTTTCGATC TTCTCGCGGAGCGAGTACAGTGTCAGGATTCCAGGAATCTCCACCATCCTCAGAATTATTTTCAGAAGAGGAGATGAGCATGAATCAGCTATTCTCAATC AAGAGATCAAAGCCATCATAAAGAACATGGTGGCCAAAAGAGAGAAAGAGAATAACAATACTAGTTCTGCTTCTGCAACTGATTTCCTTGCATTGCTTCT CAAGGCCTACACCGATCCCGACATGAAAAAGAGAATCACAGTGGATGATCTGGTTGATGAATGCAAGACATTCTACTTGGCTGGCCACGAAACCGCCACG AGCTCGCTCACCTGGACACTACTTCTGCTAGCGGTTCACACAGAGTGGCAAGAGAAAGCCAGGGATCAGGTGGTTCAACTGTTCGGAAACGGAACTTACC CAACAACTCCTGATGGCTTCTCCAGACTGTCCATTCTGACTATGATCATCAATGAATCTTTGAGGCTATACCCACCGTTCTTGCATATAGCAAGGAGAGT CGAGCGAGACCAAGTACAACTCGGTCCAGGGAAGCTAATACTTCCGAAAGGGGCCGAAGTTTACATTCCGGTTCTAGCGCTTCACCACAGGACTGAGGTA TGGGGGGAAGACGCTCAGCTATTCAGGCCAGATAGATTTGCGGAAGGGGCAGTAGCTAAGGCATCGACGACGTTTTTGCCTTTCGGTTTAGGGCCACGGG CTTGTGTTGGTATGAACTTTGCAATGACACAAATGAAGATTGCAGTTGCCATGATCCTGCAGCGTTACAGGCTTACGCTCTCGGACAAGTATGTACATTC TCCGGCTCAGGTTCCTGAACAGAGCATGGTGGACACCGATTCGAGTCCGATCCCAGATGAGATCGCAAGGGATCAAAGGCCCTCCTTACAGATTCATCCA TGGCAACATCAGGGAGATAGCACAGATGAGAATTCAAGCTACAGAGGAGCCCATGGTGGATTTGTCCCACAATATATTTCCAAGACTCCAGCCTCACATT TACTCCTGGACCAAGATCTACGGGCACAACTTGTAGTCACTGAACCAGAGCTGATCAAAGAGGTGCTCACCACCAAAGATGGATCTTATGAGAAGTATGC ATTTCTGGATTTCATGAAAGACTTGCTCGGGGATGGACTCGTTGTGTCCAGAGGTGAGAAATGGGCGAAGATGCGCAGGTTCGCCAACCCTTCCTTCCAT GGAGAAAGCTTAAAGGGTATGATCGCGAGCGTCGAGATGATGCTCGAGAGGTGGAAGAAGATTAACCATGGTGGCCGGAGGACAGAGATTGATGCATTTC AGGAGTTTAGAATCCTGACATCAGAGATCATATCCAGGACAGCTTTTGGAAGCAGCTACTTGGAAGGACATAAGGTTTTCGAGATACTAACGAAGATGGT TTCGATCATCTCGCGAAACCAGTACAGAGTCAGGATTCCAGGACTCTCCACCATCCTCAGAATCATTTTCGGAACAGGAGATGAGCATGAATCAGCTGTT CTCCAGCAAGAGATCAAAGCCATCATAATAAACATGGTGAACAAAAGAATAGAAGAAAATAACAGTACTACTTCTTCCGCAAGTGATTTCCTTGGACTGC TTGTCAAGTCCTACACTGATCCGGACACAAAGAACAGGATCACAGTGGATGATCTGGTTGATGAATGCAAGACATTCTACGTGGCGGGCCACGAAACAAC CTCGAGCTCGCTGACTTGGACAATACTTCTGCTGGCGGTTCACACAGAGTGGCAAGAGAAAGCGAGGGATCAAGTGGTACAACTGTTCGGGAACGACACT TCCCCAACACCTGATGACATCTCTAGACTTTCCATCCTGACCATGATCTTCAACGAATCTTTGAGGCTATACCCACCATTCTTCCACGTCTCGAGGAGAG ACGAGCGAGATCAAGTACGATTGGGGCCAGGGAAGCTACTACTTCCGAAAGGGACCGAAGTTCACATCCCATTTCTCGCAGTTCACCAAAGGACCGATAC ATGGGGGGAAGACGCTCAGCTATTCAGACCACAGAGATTTGCAGAAGGGGCAGTAGCTAAGGCATCCACAACGTTTATGCCGTTCGGGCTGGGGCCACGG AATTGTGTTGGTATGAACTTTGCAATAACACAGATGAAGATTGCAGTTGCCATGATCCTGCAGCGTTACAGGTTTACGCTCTCGGATAAGTATGTACATT CCCCGGCTCAGGTTTTGACTAGCTGTCCGCGTTATGGCCTGCAAACCATGCCTTCCATGGAGAAAGCTTGA
AA sequence Show only first row Show all	>Lus10006245 pacid=23139680 polypeptide=Lus10006245 locus=Lus10006245.g ID=Lus10006245.BGIv1.0 annot-version=v1.0 MRSQGIKGPPYTFFHGNTREIAHMRIQATQTPMVGLSTNHIFPRLQPHIYTWTALYGKNYLQWYGSRPQLVVTEPELIREVLTTRDGAYEKHAFQPLFKI MLGDGLVVSRGEKWTKMRRLANHAFHGESLKGMVPAMISSVEMMLERWKKMNHGEDRRIEIDASQELRILTAETISMTAFGSSYLEGQKVFELLTKMVSI FSRSEYSVRIPGISTILRIIFRRGDEHESAILNQEIKAIIKNMVAKREKENNNTSSASATDFLALLLKAYTDPDMKKRITVDDLVDECKTFYLAGHETAT SSLTWTLLLLAVHTEWQEKARDQVVQLFGNGTYPTTPDGFSRLSILTMIINESLRLYPPFLHIARRVERDQVQLGPGKLILPKGAEVYIPVLALHHRTEV WGEDAQLFRPDRFAEGAVAKASTTFLPFGLGPRACVGMNFAMTQMKIAVAMILQRYRLTLSDKYVHSPAQVPEQSMVDTDSSPIPDEIARDQRPSLQIHP WQHQGDSTDENSSYRGAHGGFVPQYISKTPASHLLLDQDLRAQLVVTEPELIKEVLTTKDGSYEKYAFLDFMKDLLGDGLVVSRGEKWAKMRRFANPSFH GESLKGMIASVEMMLERWKKINHGGRRTEIDAFQEFRILTSEIISRTAFGSSYLEGHKVFEILTKMVSIISRNQYRVRIPGLSTILRIIFGTGDEHESAV LQQEIKAIIINMVNKRIEENNSTTSSASDFLGLLVKSYTDPDTKNRITVDDLVDECKTFYVAGHETTSSSLTWTILLLAVHTEWQEKARDQVVQLFGNDT SPTPDDISRLSILTMIFNESLRLYPPFFHVSRRDERDQVRLGPGKLLLPKGTEVHIPFLAVHQRTDTWGEDAQLFRPQRFAEGAVAKASTTFMPFGLGPR NCVGMNFAITQMKIAVAMILQRYRFTLSDKYVHSPAQVLTSCPRYGLQTMPSMEKA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G26710		CYP72B1, CYP734...	PHYB ACTIVATION TAGGED SUPPRES...		Lus10006245 [exp]	0	1
AT1G67110		CYP735A2	"cytochrome P450, family 735, ...		Lus10006246 [exp]	1.0	0.9195
AT4G14060			Polyketide cyclase/dehydrase a...		Lus10008932 [exp]	6.2	0.8992
AT2G26710		CYP72B1, CYP734...	PHYB ACTIVATION TAGGED SUPPRES...		Lus10036942 [exp]	10.7	0.8947
AT2G33580			Protein kinase superfamily pro...		Lus10019662 [exp]	11.7	0.8750
AT5G28010			Polyketide cyclase/dehydrase a...		Lus10008930 [exp]	12.0	0.8774
AT3G47570			Leucine-rich repeat protein ki...		Lus10017028 [exp]	18.2	0.7786
AT2G39510			nodulin MtN21 /EamA-like trans...		Lus10040311 [exp]	22.2	0.8334
AT5G42510			Disease resistance-responsive ...		Lus10038298 [exp]	27.5	0.8110
AT4G24040		TREHALASE1, ATT...	trehalase 1 (.1)		Lus10023035 [exp]	29.3	0.8840
AT4G37850	bHLH	bHLH025	basic helix-loop-helix (bHLH) ...		Lus10039639 [exp]	30.1	0.7949

Compare expression of checked genes

Lus10006245 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.