Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G65550 169 / 3e-47 UDP-Glycosyltransferase superfamily protein (.1) AT4G34131 165 / 2e-45 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT5G49690 164 / 2e-45 UDP-Glycosyltransferase superfamily protein (.1) AT4G34135 164 / 3e-45 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT4G34138 160 / 9e-44 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT2G15480 155 / 9e-42 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G15490 151 / 2e-40 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G22590 149 / 8e-40 UDP-Glycosyltransferase superfamily protein (.1) AT3G16520 147 / 3e-39 UGT88A1 UDP-glucosyl transferase 88A1 (.1.2.3) AT1G51210 145 / 9e-39 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10043445 [exp] 351 / 1e-116 AT5G65550 225 / 3e-68 UDP-Glycosyltransferase superfamily protein (.1) Lus10028865 [exp] 320 / 7e-105 AT5G49690 191 / 1e-55 UDP-Glycosyltransferase superfamily protein (.1) Lus10008956 [exp] 304 / 1e-98 AT5G65550 189 / 1e-54 UDP-Glycosyltransferase superfamily protein (.1) Lus10008955 [exp] 300 / 6e-97 AT5G49690 190 / 4e-55 UDP-Glycosyltransferase superfamily protein (.1) Lus10028863 [exp] 297 / 8e-96 AT5G65550 183 / 1e-52 UDP-Glycosyltransferase superfamily protein (.1) Lus10028864 [exp] 212 / 2e-64 AT5G65550 154 / 1e-42 UDP-Glycosyltransferase superfamily protein (.1) Lus10012726 [exp] 190 / 1e-54 AT2G22590 471 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10003154 [exp] 185 / 7e-53 AT5G54010 318 / 3e-104 UDP-Glycosyltransferase superfamily protein (.1) Lus10027850 [exp] 172 / 6e-48 AT5G49690 560 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G024900 [exp] 305 / 4e-99 AT5G65550 173 / 7e-49 UDP-Glycosyltransferase superfamily protein (.1) Potri.012G034100 [exp] 183 / 2e-52 AT2G22590 505 / 2e-177 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G042800 [exp] 181 / 2e-51 AT5G49690 377 / 3e-127 UDP-Glycosyltransferase superfamily protein (.1) Potri.003G184400 [exp] 180 / 3e-51 AT5G49690 549 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182575 [exp] 179 / 2e-50 AT5G49690 468 / 7e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G179700 [exp] 170 / 2e-47 AT5G54010 349 / 2e-116 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G303000 [exp] 169 / 4e-47 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 165 / 2e-45 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G030600 [exp] 163 / 8e-45 AT2G22590 537 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G303600 [exp] 162 / 2e-44 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10006280 pacid=23181445 polypeptide=Lus10006280 locus=Lus10006280.g ID=Lus10006280.BGIv1.0 annot-version=v1.0 ATGGGAGCTCAAACAGAGACAACCATCCTGATGCTACCATGGCTAGCCCATGGCCACATTTCACCATTCTTCTCACTAGCCAAACATCTATCATCAAACC ACTCAAACTTCAAAATCTATTTCTGCTCAACTCCGGTAAATCTCCACCACATCAGATCATCATCATCAGAGAAAAACCCACCATTCAAAATCCCATATTC CATTCAACTGGTTGATCTCCACCTACCATGCTCACCATCGCTCCTGCCAAAATTCCACACCACCAAGAACCTGCCCCCTCACCTGATGCCCGCTTTGAAG GAGGCCTTTGACGATTCGAGGCCCGAATTCTGCAAGATCCTCAAGAGGTTGAAGCCTGACTTGTTGGTGTATGATGTTCTCCAGCCGTGGGCCGCTGAGG CAGCGGCGGAGTCGAATGTGGTTGGGATTAAGTGTGTTCTGTTTGTTCCTGGTGGTGCTGCATGTTATAGCTTTTTGGCTCATTATAGCATCAAGCCTGC TGGTGCTCAGTACCCTCTTCAGGATTGGGGGATTGCTTCGAGGGAAGGATTCCTGAAGAAACGCGCTACATATCCTAATGGTTTGAGGGACGAAGACTTA GACACATACACAGATTGCATGAAGAGATCCTCTGACATCATTCTAATCAAGACAAGTAGGAACATAGAAGCAAAGTACATTGATTACTTGTCTGAACTAC TCGGGAAAGAAGTTGTACCCGTTGGTCCACTCGTCAACGATAAACCTGAAGACCACAGAACAGGCGCCGAAGGAGATGATGACAACAAAATCCTGAAATG GCTAAACTCAATCGACTCGGACTCTCCGGTCGTTTACGTCTCGTTCGGGAGCGAGTACTTCCCCTCGAAGGAAGAGATGGGGGAGATAGCCAGAGGTTTG GAGATGAATCAGGCTCTGATCAGGTTCATCTGGGTGGTCAGGTTTCCTCCTGACGACCACCACAGAGAGAAAAATAATAAAACCCTCCTCCTGCAGGAAG CTCTGCCGGAAGGGTTCCTGGAGAGGGTGGAAGGGAGAGGACTTTTGGTGGAAGGGTGGGCACCGCAGGCTGAGATTCTGAGGAACGAGAGGGTAGGAGG GTTTGTGAGCCACTGCGGGTGGAGCTCGGTGATCGAGGCCGTTGTGTACGGTGTCCCTATCGTGGCGATGCCGATGCAGCTTGACCAGCCGTGGAATGCT AATTTAGTTGAGGAGATTGGTGTTGGTGTTGAGGTTAAGGGGAATAAGGATGGGATGATAAAGAGGATTGATGGAGATGAGATGGGGAGAGTGATTGGTG AAGTGTTGGGTGATATGGAGATGAGGAATAGGGTTAGGGAGTTGAGTGAGAAGTTGAAAGGTGATGCTGATGCTGAGATGGATTGTGTTGTTGATAGGCT AAGGAGCCTTGTTGAAGGAGTGTAG
AA sequence Show only first row Show all	>Lus10006280 pacid=23181445 polypeptide=Lus10006280 locus=Lus10006280.g ID=Lus10006280.BGIv1.0 annot-version=v1.0 MGAQTETTILMLPWLAHGHISPFFSLAKHLSSNHSNFKIYFCSTPVNLHHIRSSSSEKNPPFKIPYSIQLVDLHLPCSPSLLPKFHTTKNLPPHLMPALK EAFDDSRPEFCKILKRLKPDLLVYDVLQPWAAEAAAESNVVGIKCVLFVPGGAACYSFLAHYSIKPAGAQYPLQDWGIASREGFLKKRATYPNGLRDEDL DTYTDCMKRSSDIILIKTSRNIEAKYIDYLSELLGKEVVPVGPLVNDKPEDHRTGAEGDDDNKILKWLNSIDSDSPVVYVSFGSEYFPSKEEMGEIARGL EMNQALIRFIWVVRFPPDDHHREKNNKTLLLQEALPEGFLERVEGRGLLVEGWAPQAEILRNERVGGFVSHCGWSSVIEAVVYGVPIVAMPMQLDQPWNA NLVEEIGVGVEVKGNKDGMIKRIDGDEMGRVIGEVLGDMEMRNRVRELSEKLKGDADAEMDCVVDRLRSLVEGV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G65550			UDP-Glycosyltransferase superf...		Lus10006280 [exp]	0	1

Compare expression of checked genes

Lus10006280 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.