Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G04845 237 / 7e-79 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012349 [exp] 325 / 1e-113 AT2G04845 288 / 7e-100 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G161800 [exp] 270 / 9e-92 AT2G04845 279 / 6e-96 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10006397 pacid=23162673 polypeptide=Lus10006397 locus=Lus10006397.g ID=Lus10006397.BGIv1.0 annot-version=v1.0 ATGAGGTTACTATTGATTTACGGTCAAAGGATGAGGATTCTCAAGCCTAACCGGAAACGTCTTTTAGACCGGCGAATTCGCGGAAGCCCGTGGACCGTGC TTGTCATCTCCGACAGTATCAGTAACTTCTACGCTGATCGGAAAAAAATAAGCTTGGAAGGAGAGAAGGTAATACTTGTACCTTACATGGAAGTGCATGT CCCAAAATACCATCAATGGATGCAGGATCCGGTTCTGCTCCAAGCAACCGGCTCCGAGCCGCTTTCCCTTCAAGAAGAGTACGACATGCAGCTCTCCTGG ACCCAAGACCCTCTCAATCAAGTGGAAGTGGATTTTGATTGTTTTGCTGCAGAACGGACATTTATTGTTCTGGACAAAGGTTTCGTGCAGGGAGGGTTTG TTCATGGAGATCCCCATGTAGAAGCTCTTTACTTTTTACTTCCACGAATCAATTTGGAGTGGCGCCCTTTATTTGAAACCATGGTGGGTGATGTGAATAT ATACATGAACGACTTGGATGATCCTCAAATGGCTGAAGTGGAGATCATGATCGCTGAGCCAAAAAGCCGCGGTAAAGGACTTGGGGAAGAATCTGTTCTT ATGATGATGGCCTATGCAATCGAGAGCCTAGGGATCCGCGTCTTTCGAGTTAAAATTGGAGAAGCAAATGGATCATCTCTTAGTCTCTTCAGAAAATTGG TGACACTGGAATTACCAGTGACGGAGCAGAAGCGTGAAGAGTTGCTGAATATGAAGGGTAAAGTAGTCATGCATAGATGA
AA sequence Show only first row Show all	>Lus10006397 pacid=23162673 polypeptide=Lus10006397 locus=Lus10006397.g ID=Lus10006397.BGIv1.0 annot-version=v1.0 MRLLLIYGQRMRILKPNRKRLLDRRIRGSPWTVLVISDSISNFYADRKKISLEGEKVILVPYMEVHVPKYHQWMQDPVLLQATGSEPLSLQEEYDMQLSW TQDPLNQVEVDFDCFAAERTFIVLDKGFVQGGFVHGDPHVEALYFLLPRINLEWRPLFETMVGDVNIYMNDLDDPQMAEVEIMIAEPKSRGKGLGEESVL MMMAYAIESLGIRVFRVKIGEANGSSLSLFRKLVTLELPVTEQKREELLNMKGKVVMHR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G04845			Acyl-CoA N-acyltransferases (N...		Lus10006397 [exp]	0	1
AT1G55200			Protein kinase protein with ad...		Lus10036100 [exp]	5.8	0.8713
AT1G16650			S-adenosyl-L-methionine-depend...		Lus10005589 [exp]	7.5	0.8262
AT3G21090		ABCG15	ATP-binding cassette G15, ABC-...		Lus10027353 [exp]	7.5	0.8703
AT2G36985		DVL16, ROT4	ROTUNDIFOLIA4, DEVIL 16, DVL f...		Lus10026526 [exp]	8.8	0.7961
AT1G01750		ADF11	actin depolymerizing factor 11...		Lus10008489 [exp]	21.2	0.8554
					Lus10014678 [exp]	24.9	0.8536
AT1G15200			protein-protein interaction re...		Lus10023800 [exp]	25.0	0.8581
AT1G70620			cyclin-related (.1.2.3)		Lus10026699 [exp]	26.7	0.8245
AT1G11330			S-locus lectin protein kinase ...		Lus10015422 [exp]	27.0	0.8436
AT1G61780			postsynaptic protein-related (...		Lus10002066 [exp]	28.4	0.8351

Compare expression of checked genes

Lus10006397 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.