Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69930 57 / 1e-11 ATGSTU11 glutathione S-transferase TAU 11 (.1) AT1G10370 51 / 1e-09 GST30B, ATGSTU17, ERD9 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) AT1G27130 51 / 1e-09 GST12, ATGSTU13 GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 (.1) AT1G10360 47 / 2e-08 GST29, ATGSTU18 GLUTATHIONE S-TRANSFERASE 29, glutathione S-transferase TAU 18 (.1) AT1G69920 47 / 3e-08 ATGSTU12 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, glutathione S-transferase TAU 12 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026722 [exp] 97 / 8e-29 AT1G69930 55 / 6e-11 glutathione S-transferase TAU 11 (.1) Lus10036688 [exp] 95 / 3e-26 AT1G10370 281 / 1e-96 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10009746 [exp] 91 / 8e-26 AT1G10370 96 / 1e-25 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10029518 [exp] 90 / 3e-25 AT1G69930 96 / 3e-25 glutathione S-transferase TAU 11 (.1) Lus10037234 [exp] 90 / 3e-24 AT1G10370 285 / 2e-98 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10013282 [exp] 68 / 3e-16 AT1G10370 229 / 2e-76 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030806 [exp] 69 / 5e-16 AT1G10370 290 / 4e-100 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030805 [exp] 65 / 1e-14 AT1G10370 308 / 4e-107 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10001640 [exp] 38 / 0.0001 AT2G29420 206 / 6e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G035500 [exp] 61 / 2e-13 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G032800 [exp] 60 / 6e-13 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10006525 pacid=23140008 polypeptide=Lus10006525 locus=Lus10006525.g ID=Lus10006525.BGIv1.0 annot-version=v1.0 ATGATCGGGACTAAGGTGATCAACAAGGAGTCAACTCCTGGTCTGTCTAAATGGGTTGAGAAATTCTCAGCTCATGCTGCTATGAAAGATGTGATGCCTG AGACTGAGAAACTAGTCGAGTTTGCAAAGTTAATGGCTCCCAAGAGGAAAGAGTAA
AA sequence Show only first row Show all	>Lus10006525 pacid=23140008 polypeptide=Lus10006525 locus=Lus10006525.g ID=Lus10006525.BGIv1.0 annot-version=v1.0 MIGTKVINKESTPGLSKWVEKFSAHAAMKDVMPETEKLVEFAKLMAPKRKE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G69930		ATGSTU11	glutathione S-transferase TAU ...		Lus10006525 [exp]	0	1
AT5G17540			HXXXD-type acyl-transferase fa...		Lus10005660 [exp]	4.8	0.5641
AT3G07880		SCN1	SUPERCENTIPEDE1, Immunoglobuli...		Lus10027327 [exp]	15.0	0.5427
AT2G27190		ATPAP12	ARABIDOPSIS THALIANA PURPLE AC...		Lus10024299 [exp]	18.4	0.5271
AT1G05675			UDP-Glycosyltransferase superf...		Lus10010469 [exp]	20.0	0.4910
AT1G14920	GRAS	RGA2, GAI	RESTORATION ON GROWTH ON AMMON...		Lus10036458 [exp]	20.3	0.4812
					Lus10016118 [exp]	21.7	0.4910
AT4G02780		ATCPS1, ABC33, ...	GA REQUIRING 1, CPP synthase, ...		Lus10004323 [exp]	37.1	0.4573
AT3G12120		FAD2	fatty acid desaturase 2 (.1.2)		Lus10004181 [exp]	43.0	0.4736
AT3G53710		AGD6	ARF-GAP domain 6 (.1.2)		Lus10012991 [exp]	44.0	0.4446
					Lus10039432 [exp]	45.5	0.4446

Compare expression of checked genes

Lus10006525 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.