Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G43830 374 / 3e-132 Aluminium induced protein with YGL and LRDR motifs (.1) AT3G22850 367 / 5e-130 Aluminium induced protein with YGL and LRDR motifs (.1) AT3G15450 231 / 3e-76 Aluminium induced protein with YGL and LRDR motifs (.1.2.3) AT4G27450 228 / 6e-75 Aluminium induced protein with YGL and LRDR motifs (.1) AT5G19140 207 / 6e-67 AtAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039382 [exp] 511 / 0 AT5G43830 372 / 6e-132 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10041181 [exp] 459 / 3e-166 AT5G43830 369 / 1e-130 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10033418 [exp] 221 / 3e-72 AT4G27450 369 / 2e-130 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10034883 [exp] 218 / 5e-71 AT4G27450 365 / 6e-129 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10018484 [exp] 217 / 2e-70 AT4G27450 305 / 3e-105 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10011191 [exp] 206 / 4e-66 AT4G27450 303 / 2e-104 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10034038 [exp] 203 / 1e-65 AT5G19140 389 / 3e-139 Aluminium induced protein with YGL and LRDR motifs (.1.2) Lus10010505 [exp] 201 / 2e-64 AT5G19140 392 / 4e-140 Aluminium induced protein with YGL and LRDR motifs (.1.2) Lus10021899 [exp] 181 / 7e-52 AT1G04210 609 / 0.0 Leucine-rich repeat protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G081600 [exp] 429 / 3e-154 AT5G43830 391 / 3e-139 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.008G158400 [exp] 427 / 1e-153 AT5G43830 388 / 3e-138 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.011G122100 [exp] 233 / 8e-77 AT4G27450 428 / 7e-154 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.001G403000 [exp] 229 / 2e-75 AT4G27450 436 / 3e-157 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.011G049900 [exp] 221 / 2e-72 AT4G27450 383 / 6e-136 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.004G040600 [exp] 220 / 6e-72 AT4G27450 366 / 2e-129 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.008G203400 [exp] 195 / 2e-62 AT5G19140 397 / 4e-142 Aluminium induced protein with YGL and LRDR motifs (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0052 [flax] [poplar] NTN PF12481 [flax] [poplar] DUF3700 Aluminium induced protein
Representative CDS sequence Show only first row Show all	>Lus10006624 pacid=23145309 polypeptide=Lus10006624 locus=Lus10006624.g ID=Lus10006624.BGIv1.0 annot-version=v1.0 ATGTTAGCTGTGTTTGACAAGAACGTGGCCAAGTGCCCGCCTGAGCTCCAGAGCCCGGCTTCCGGTGGGTCCGCCTCCGCTCTCACAAATGGGTTCTTGG CCAACCATTTCCAGTCCCTTCACCCTTCTTCCGTCGTCGTCAATCTCGCCTCTTCTGGCTTGATCGCCTACTCTCTCGACAAGAACAACCCTCTCGTCCC TAGATTATTTGCTGTTGTGGACGACATTTTCTGCTTGTTCCAAGGTCATATTGAAAATGTTGCCACCCTTAAGCAACAGTATGGATTAAACAAAGCTGCA AATGAGGTTACTATCATCATTGAAGCTTACAGAACCCTAAGAGACCGTGGCCCTTACCCTCCCGATCAAGTCATCAGAGACATTCAGGGGAAGTTTGTTT TCGTGCTGTACGACAGCGCGTCGAAAGTCACTCTGTTTGCTTCTGATGCTGATGGAAGCGTACCCTTCTTCTGGGGAACTGATTCTGAAGGTCAACTTGT TCTATCTGATGACACCGAAGTTATTCAGAAGGGATGTGGGAAATCTTATGCTCCATTCCCCAAAGGCTGCTTCTTTACCACTTCTGGAGGGTTGAGGAGC TTTGAACACCCTCTGAATGAGTTGAAGCCAATACCAAGAGTTGACAGCTCAGGGCAGGTTTGTGGCTCCAACTTCAAGGTGGATGCAGATGCTAAGAAGG AGAGCGGTGGGATGCCCAGAGTCGGAAGTTCATACAACTGGTCCCAACACTATTGA
AA sequence Show only first row Show all	>Lus10006624 pacid=23145309 polypeptide=Lus10006624 locus=Lus10006624.g ID=Lus10006624.BGIv1.0 annot-version=v1.0 MLAVFDKNVAKCPPELQSPASGGSASALTNGFLANHFQSLHPSSVVVNLASSGLIAYSLDKNNPLVPRLFAVVDDIFCLFQGHIENVATLKQQYGLNKAA NEVTIIIEAYRTLRDRGPYPPDQVIRDIQGKFVFVLYDSASKVTLFASDADGSVPFFWGTDSEGQLVLSDDTEVIQKGCGKSYAPFPKGCFFTTSGGLRS FEHPLNELKPIPRVDSSGQVCGSNFKVDADAKKESGGMPRVGSSYNWSQHY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G43830			Aluminium induced protein with...		Lus10006624 [exp]	0	1
AT3G19080			SWIB complex BAF60b domain-con...		Lus10009333 [exp]	9.0	0.9209
AT1G65930		cICDH	cytosolic NADP+-dependent isoc...		Lus10020798 [exp]	11.5	0.9200
AT5G51970			GroES-like zinc-binding alcoho...		Lus10027409 [exp]	14.7	0.9149
AT3G30530	bZIP	ATBZIP42	basic leucine-zipper 42 (.1)		Lus10013059 [exp]	15.5	0.8442
AT5G11420			Protein of unknown function, D...		Lus10019724 [exp]	20.7	0.9161
AT5G09810		ACT2/7, ACT7	actin 7 (.1)		Lus10005819 [exp]	21.1	0.8586
AT4G28610	GARP	ATPHR1, PHR1	phosphate starvation response ...		Lus10022885 [exp]	22.8	0.8555
AT3G10120			unknown protein		Lus10039676 [exp]	24.5	0.9082
AT3G17860	ZIM	TIFY6B, JAI3, J...	JASMONATE-INSENSITIVE 3, jasmo...		Lus10031333 [exp]	25.3	0.9134
AT1G09740			Adenine nucleotide alpha hydro...		Lus10015896 [exp]	25.5	0.9113

Compare expression of checked genes

Lus10006624 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.