Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 160 / 4e-46 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 158 / 3e-45 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G43820 150 / 2e-42 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 147 / 5e-41 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G31790 145 / 1e-40 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 145 / 2e-40 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 133 / 9e-36 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G14090 125 / 5e-33 UDP-Glycosyltransferase superfamily protein (.1) AT4G15490 114 / 7e-29 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT4G15480 114 / 1e-28 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006352 [exp] 278 / 3e-91 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006351 [exp] 252 / 3e-83 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006721 [exp] 243 / 5e-78 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006353 [exp] 183 / 1e-54 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 179 / 3e-53 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10017825 [exp] 177 / 3e-52 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10024486 [exp] 176 / 6e-52 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10014148 [exp] 176 / 7e-52 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10010468 [exp] 157 / 5e-45 AT1G05675 368 / 7e-124 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G141700 [exp] 160 / 5e-49 AT1G05680 237 / 4e-77 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 166 / 3e-48 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032500 [exp] 165 / 5e-48 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 163 / 3e-47 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 163 / 3e-47 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140500 [exp] 162 / 9e-47 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.014G175000 [exp] 159 / 8e-46 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.004G179300 [exp] 159 / 1e-45 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 155 / 5e-44 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 152 / 4e-43 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10006720 pacid=23152204 polypeptide=Lus10006720 locus=Lus10006720.g ID=Lus10006720.BGIv1.0 annot-version=v1.0 ATGGAGGAGCTCTATCATGGGCTCAACAACTCCAACCACTACTTCCTTTGGGTGGTCAGGAAAACCGAAGAGGACAAATTCCCCCAACACTGCGTCTCCC CAAAGGGTCTCGTCTTGTCGTGGTGCCCGCAGATGGAAATGCTCATGAGCCCGGTAATGGGTTGTTTCTTGACGCATTGTGGGTGGAACTCAACGCTCGA GTCTTTGAGTTTGAGAATGCCCATGGTGGCGATGCCTCGGTGGGCGGACCAGTTTACGAATGCTAATTTCATAAAGGATGTTTGGAAGGTGGGTGTGGTG GTTGAAGGTGATGGTGAAGGTGAGTTGGTAAGAAGGGGAGAGATTGAGAGATGTGTCAAGGAAGTGATGGAAGGTGCGAACGGAGAAGAGATGAGGAGGA ATTGCGAGAAGTTTGGGGAGCTCGTGAAGGATGCTGCGAGCGAAGGTGGGAGCTTGGATGGGAATATTCGTCGATTTGTTGGTAGCTTGATTCGAGCCCT GGAAGTTCTGGCAAGTGGAGCGGTCGGATGCTTAGTAACGCATTGCGGGTGGAACTCGACATTAGAGGCGACGAGCTTGGGAGTGCCGATGGTGGGCATG CCTCGATGGAAGACTGGTGTGAAGGCTGAAGGTGAAGAGCATGGAGTGGTGGGGAGAGAAGTGATTGAGAAGTGCATAAGGGAAGTAATGGAGGGAGAGA AAGGGGAAGAATTGAGGAGAAATGCTGAGAAATTGAAGAAGTTGATGAAAGATGCAGTTAGTGAAGGTGGAAGTTCTCACAGAAACATCACAGAGTTTGC TGCATTCTGTAATCATAGAAACTAG
AA sequence Show only first row Show all	>Lus10006720 pacid=23152204 polypeptide=Lus10006720 locus=Lus10006720.g ID=Lus10006720.BGIv1.0 annot-version=v1.0 MEELYHGLNNSNHYFLWVVRKTEEDKFPQHCVSPKGLVLSWCPQMEMLMSPVMGCFLTHCGWNSTLESLSLRMPMVAMPRWADQFTNANFIKDVWKVGVV VEGDGEGELVRRGEIERCVKEVMEGANGEEMRRNCEKFGELVKDAASEGGSLDGNIRRFVGSLIRALEVLASGAVGCLVTHCGWNSTLEATSLGVPMVGM PRWKTGVKAEGEEHGVVGREVIEKCIREVMEGEKGEELRRNAEKLKKLMKDAVSEGGSSHRNITEFAAFCNHRN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10006720 [exp]	0	1
AT1G52540			Protein kinase superfamily pro...		Lus10019988 [exp]	2.4	0.6727
AT5G51950			Glucose-methanol-choline (GMC)...		Lus10038891 [exp]	7.2	0.6844
AT1G14185			Glucose-methanol-choline (GMC)...		Lus10030463 [exp]	44.0	0.6218
AT4G23350			Protein of Unknown Function (D...		Lus10042273 [exp]	56.5	0.5872
AT4G16480		ATINT4	inositol transporter 4 (.1)		Lus10000534 [exp]	58.5	0.5832
AT1G75340	C3HZnF		Zinc finger C-x8-C-x5-C-x3-H t...		Lus10028100 [exp]	67.7	0.5385
AT1G76520			Auxin efflux carrier family pr...		Lus10013200 [exp]	68.4	0.5836
AT3G50845			Protein of unknown function (D...		Lus10014311 [exp]	68.5	0.5937
AT4G27730		ATOPT6	ARABIDOPSIS THALIANA OLIGOPEPT...		Lus10007770 [exp]	73.6	0.5464
AT3G23880			F-box and associated interacti...		Lus10023263 [exp]	79.0	0.5238

Compare expression of checked genes

Lus10006720 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.