Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10010 424 / 1e-147 unknown protein AT5G64910 290 / 7e-95 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005778 [exp] 576 / 0 AT5G10010 466 / 5e-164 unknown protein Lus10006744 [exp] 136 / 1e-39 AT5G10010 115 / 9e-32 unknown protein Lus10020079 [exp] 53 / 2e-07 AT4G05120 392 / 7e-135 FUDR RESISTANT 1, EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3, Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G083700 [exp] 453 / 1e-160 AT5G10010 363 / 5e-124 unknown protein Potri.007G082000 [exp] 433 / 8e-153 AT5G10010 388 / 8e-134 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10006823 pacid=23150768 polypeptide=Lus10006823 locus=Lus10006823.g ID=Lus10006823.BGIv1.0 annot-version=v1.0 ATGAGGAAAGGAGCTAAGAGAAAGCGGGTGCAGAAGGAGAACGGCAAAGATAAGGAAGCTTCTACGACTTCTGCTCCGGCGGCGGAGGCGAACGAGGCTC CTCCTGCTAAGCCCCGCTCTATTCGAGCTAAACGCCCCAAAGAGGAGCCGGAGTATTTCGAGGAGAAACGGAATCTGGAGGATCTGTGGAAGGCTGTTTT CCCGGTTGGGACGGAGTGGGATCAATTGGACGTTATGTACAATAAATACAATTGGGATTTTTCGAACCTGGAAGAAGCTTTTGAAGAAGGTGGAGTTCTT CATGGGAAGAAAGTTTATCTCTTTGGTACTACTGAACCTCAATTGGTACCTTACAAAGGGGATAGCAAAATAATCAATGTACCTACGATTGTTGCGGTTC CTTCACCTTTTCCACCATCGGATAAGATCGGTATTAATTCAGTTCAAAGGGAAGCTGAAGAAATAGTTCCTATGAAGCAAATGAAGATGGACTGGGTTCC ATACATTCCAATGGAGAACAGGGACACAGAGGTTCTTAGATTAAAATCTCAAATCTTCATCTTGAGCTGTACTCAAAGAAGAAGCGCATTGAGACATATG AAGGAAGAACGCCTTAAGAAATTTGAATACTGCCTTCCATACTTCTATAATCCACTTAAGGAAGATGATTTTGAACAAAGCACTGAGGTCCAAATTTTTT TCCCAGCAGAGGACAAGCCGCCGCTTTTCTGTGAGTATGATTGGGACATGGACGACCTTGAGGAATTCACCGATAATCTGATCACGGAGGAAGCACTATC TGAAGATCAGAAGGACGCCTTCAAGGAATTTGTGAAAGAGAAAGTTCGAGAAGCAAAGAAAGCTAATCGAGAGGCTAGGGAAGCGAGGAAAAAGGCAAGG GAAGATCTGAGTGAAGAAACAAAAACTGCATTTGAGAAAATGACATTCTACAAATTCTACCCTAAGAAGACTGAAGACTCCCCTGATGTTTCTTCTGTCA AGTCGCCTTTCATCAACCGATATTACGGGAAGGCTCACGAGGTCCTATAG
AA sequence Show only first row Show all	>Lus10006823 pacid=23150768 polypeptide=Lus10006823 locus=Lus10006823.g ID=Lus10006823.BGIv1.0 annot-version=v1.0 MRKGAKRKRVQKENGKDKEASTTSAPAAEANEAPPAKPRSIRAKRPKEEPEYFEEKRNLEDLWKAVFPVGTEWDQLDVMYNKYNWDFSNLEEAFEEGGVL HGKKVYLFGTTEPQLVPYKGDSKIINVPTIVAVPSPFPPSDKIGINSVQREAEEIVPMKQMKMDWVPYIPMENRDTEVLRLKSQIFILSCTQRRSALRHM KEERLKKFEYCLPYFYNPLKEDDFEQSTEVQIFFPAEDKPPLFCEYDWDMDDLEEFTDNLITEEALSEDQKDAFKEFVKEKVREAKKANREAREARKKAR EDLSEETKTAFEKMTFYKFYPKKTEDSPDVSSVKSPFINRYYGKAHEVL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G10010			unknown protein		Lus10006823 [exp]	0	1
AT1G16970		KU70, ATKU70	ARABIDOPSIS THALIANA KU70 HOMO...		Lus10006818 [exp]	1.4	0.8045
AT4G39400		DWF2, CBB2, BIN...	DWARF 2, CABBAGE 2, BRASSINOST...		Lus10006817 [exp]	14.1	0.7361
AT1G05460		SDE3	SILENCING DEFECTIVE, P-loop co...		Lus10017379 [exp]	20.0	0.7726
AT4G17140			pleckstrin homology (PH) domai...		Lus10006816 [exp]	35.7	0.7603
AT4G36920	AP2_ERF	FL1, FLO2, AP2	FLORAL MUTANT 2, FLOWER 1, APE...		Lus10023165 [exp]	48.0	0.7795
AT3G23750			Leucine-rich repeat protein ki...		Lus10023220 [exp]	67.4	0.7080
AT4G36090			oxidoreductase, 2OG-Fe(II) oxy...		Lus10028671 [exp]	78.9	0.7621
AT4G35880			Eukaryotic aspartyl protease f...		Lus10041864 [exp]	109.0	0.7464
AT5G45650			subtilase family protein (.1)		Lus10020458 [exp]	112.9	0.7531
AT5G06750			Protein phosphatase 2C family ...		Lus10004170 [exp]	132.2	0.7385

Compare expression of checked genes

Lus10006823 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.