Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G03080 837 / 0 kinase interacting (KIP1-like) family protein (.1) AT4G02710 548 / 3e-172 Kinase interacting (KIP1-like) family protein (.1) AT4G14760 503 / 1e-150 kinase interacting (KIP1-like) family protein (.1) AT3G22790 442 / 3e-129 Kinase interacting (KIP1-like) family protein (.1) AT2G30500 146 / 2e-36 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) AT2G22560 145 / 6e-35 Kinase interacting (KIP1-like) family protein (.1) AT5G58320 138 / 1e-33 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3) AT5G10500 133 / 3e-31 Kinase interacting (KIP1-like) family protein (.1) AT1G09720 130 / 3e-30 Kinase interacting (KIP1-like) family protein (.1) AT2G47920 106 / 2e-25 Kinase interacting (KIP1-like) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014687 [exp] 2646 / 0 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10022079 [exp] 1204 / 0 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10042627 [exp] 777 / 0 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Lus10039359 [exp] 675 / 0 AT3G22790 1402 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Lus10021908 [exp] 343 / 1e-96 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10041192 [exp] 301 / 4e-83 AT4G14760 744 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10002655 [exp] 140 / 3e-33 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1) Lus10025717 [exp] 138 / 2e-32 AT2G22560 497 / 6e-158 Kinase interacting (KIP1-like) family protein (.1) Lus10035944 [exp] 137 / 3e-32 AT5G10500 280 / 3e-78 Kinase interacting (KIP1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G049600 [exp] 1070 / 0 AT1G03080 1229 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.005G213400 [exp] 1061 / 0 AT1G03080 1399 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.010G083300 [exp] 722 / 0 AT3G22790 1306 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.008G156250 [exp] 465 / 3e-148 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1) Potri.008G156200 [exp] 244 / 2e-65 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.013G158100 [exp] 159 / 4e-40 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) Potri.019G131000 [exp] 146 / 4e-36 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) Potri.007G011300 [exp] 145 / 1e-34 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.005G147300 [exp] 142 / 7e-34 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1) Potri.002G106400 [exp] 138 / 1e-32 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07765 [flax] [poplar] KIP1 KIP1-like protein
Representative CDS sequence Show only first row Show all	>Lus10006896 pacid=23142107 polypeptide=Lus10006896 locus=Lus10006896.g ID=Lus10006896.BGIv1.0 annot-version=v1.0 ATGACTGCACGAGCGAAGTCTACACGTATGTATTCCTGGTGGTGGGATAGCCACATTAGCCCCAAGAACTCGAAATGGCTTCAGGAGAATCTAACAGATA TGGATTCCAATGTAAAAAAGATGATTAAGCTCATTGAAGAAGATGCTGATTCATTTGCAAGGAGGGCGGAGATGTATTATAAGAAACGTCCGGAGCTTAT GAAATTAGTGGAAGAGTTCTACAGGGCATATCGTGCTTTGGCCGAAAGATATGATCATGCAACTGGGGTTATCCGTCATTATCATCTCACCATGGCTAAA GAATTTCCTAACCAGTCCCAGTGTTCGCTAGGCGACGATTCATTGGCGGGTCTTGTTGTAGATTGTGATCCATGCACACCTGATCTTCCATCTCTCCGTG CATTTCTTGATCCAGATGAGTTGGAAAAGGATGATTTGGACGTCTCGCCATCACAATACTATACTGCAAAGGGAAGTGGTGGTTTTACAGAAGGAGCTCG TTCTGTCTGCAGCAGAAAGAGTGTGAAACATTTCAGTGAAATGTTTGGTTCTGGAGACGCGGGAGTAAGAAAAGGGCTTAATTTTGACGATGCTGGAGAC AAAAAACGCAATGGCAGTGTTGAAACGAAAACCCGAGGTCCATCTGACTCTGACCAAATGGCAAAAGCTGAGCAAGAAATCTTGACTCTGAAGAATGCTC TTGCTAAATTAGAAGGTGAAAAGGAGGCTGACTTACTTCAGTACCAACAAAGTATGGAAAGGTTGACCAGTCTGGAGTCAGAAGTATCTCGTGCAAGAGA AGGTTCTTTGGGACTCAGTGGACGGGCTAGTAAAGCTGAAGCAGAAGTCCAAATGTTGATGCAAAGCCTTGCCAAGTTGGAATCTGAGAAGGAAATCAAC TTTCTCCAGTACCAGCAGTATCAGGATAAAATATCTAACCTTGAGAAGAACGTATCTTGTGCTGAACAGAACATGGGAGAGCTAAGTGAGCGAGCTAGTA AATCTGAAACTGAAGTTCTTTCACTAAAGGAAGATTTGGCTACAATAGGTGCTGAAAAGGAATCTGCTCTTTTTCAGTATAAACAATGCTTGGAGAGGAT ATCTGACCTGCAGAGCAAATTATTACAAGCTGAGGAAGATGCTATGACGTGTAAAAGGCGTGCAGAGATGGCTGAAGAAGAAGTTGAAAGATTGAAGCAG GCACTGGAAAAGTTAACTGAAGAGAATGAAGCTACTGCAGTTCGCTTCCAGCAATGTCTCGATTCAATACAAACTCTGGAGCACAAGCTTAAATGTGCTG AGGAGGAGACGCAAAGGCTGAATTCTGTGATAGACGATGGGGTTTCCAAGTTGAGAGGTGCTGAAGATAAGTGCATCATGTTGGAGAGATCAAATCAGAC CATGACTTCCGAGCTGGAGTCTTTGTCGCAGAAAATGGAAGCTCAAAATATGGAACTTACAGACAAGCAGAAGGAACTGGGGGAAGTTTGGACTAGTATG CAAGAAGAGCATTTGAGGTTTGTAGAGGCTGAGACTGTTTTTCAAACTTTGCAGGATCTACATTCTCAATCTCAGGAAGAACTTAGGACTTTGGGTGCAG AGCTTCAGAGCAGGGTTCAGATTTTAGAGGACCTTGAAGCTCGTAACTATAGTTTAGAGACTGAAGTTCGGCAGTTTGAGCTTGTAAACAAGAGCCTGAC TGAGGTTAACTTGTCTTCTGCTCTAATGCTGCAGAGCTTAAAGGATGAGATGTCCAGCTTAAGAGAACTTATAGGGAAACTAGAAGCAGAGATTGAACGT CGTGTGGACCAAAGAAATGCTCTTCAGCAAGAAATTTATTGCCTAAAAGAGGAACTTAATGATCTCAACAAGAATCACCACACTATCAAGGAGCAGGTTG AGTCAGTCGGATTAAATCCGGAGTGCATAAGCTCTTCTGTGAGGGATCTGCAGAATGAAAATGCGAAGCTGAAAGAGGATCATGAGAGAAGCAAAAGTGA GAGATTAGTACTTATTGAGAAGTTGGAGGTCATGGAAAAGCTAATGGAGAAAAATTCTTTCTTGGAGAATTCCTTGTCAGATTTGAATGTGGAGTTAGAT GGAGCAAGGGAGATGGTGAAGAAATTGGAAGCAACCTGTCAGTGTCTCTTGGGAGAGAAGACTACTCTTGTTTCCGAGAAGGCTGCATTGGACTACCAGT TAGAGACTGTGACCAATAACTCGGAGAAGCTCACAGAGGAAAACAACATTCTGGAGACATCCCTCCTTGACGCAAATGCAGAACTTGATAGGCTAAGAGA GAGAATAAATAGCTTGGAAGCATTATGTCTGTTGCTCAAGAGTCAGAAATCGGACCTCTCTACTGTCAAAGCAAGTTTAACATCTCAGTCGGAAGTCACT CAAAAAAGGATGGAGGATCTGGAGAGAAGTTATGGAAGCTTGGAAGAGAGACATTCAGCTCTTGAGACTGAGAAAGAATCCATGCTTCTAGAAGTAAAAG AACTGCAGACTTCTTTGGAATCTGGGAAGCAAGAGCATTCTAGGCTTGTGAGTCAAAGTGAGTCTCAATTGGCTGGTATGACATCACAGATTAAGTTACT AGAAGAAGAAACACACCGTACGGAGAAAGAATTTGAGGAGGAACTCGACAAAGCCATTGCTTCTCAGATTGAGATCTTCGTCCTGCAGAGATGCATACAA GATGTGGAAGAGAACCACTCTTCCCTCTTGCTTGAGTGTCAAGCACTCTTGGCCACATCTAAACGTTATGAGGAAGTCGTTTCAGCACTCGAGGAGGAAA ATCTTGAGCAAAAGGAGGAGGTCAGATTTCTTTCCGATCAACTTACAACACTGAGACTGGGTATTTTCAGGATAGCAAAGATTCTTGGGGTTGATATAAA TTGTTGGCGAAAAGACGAGACTGGATTTCTGAGACAAGTACTGAAAAGGCTAAACGGAACTCAAGAGCTGCTGTTAAATACTAATGAGGAGAATCAGCAG TTATTCATTGAGAAATCTGTTCTTGCTACATTGCTCTCAGGACTGCAGATTGAGGTTGCAAATCTTGTGATGACTCAGCGTATTATACTGGAAGATGAGA AACGGCAGTTGCGCAAAGAGCTGGAAGACTTGAAGTCCAAGTACGAAGAGGTTGAGGCGAGACTAGCGAGTCAGGAAAGGCAGCTTATCAAGCTATCTGG AGACTTTGGTCAACAGAGCAGGGAGGTGAACAGCATTCATGGCTTGAAAACTGAGCTGGAGAGTCAACTCCGCAGATCGCGTGTCGAATTGGTGGAGATG ATGAATTTGAAGACCAATGTAAGTAACAAGTTGCAGAAGGTAACAAATGATGCTGAACAGTGGGAGTCTCAGGCTGTTATCTTCCTGCGTGAGCTGCAAA TTTCGGTTGTCCGAGAGGGACTGTTTGAAGGCAAGGTTCGTGAGCTCATTGAAGCATGCCGGAGCTTTGAACTAAGTATTTTCGCCAAAGATACGGAAAT AGGACAACTGAAGGAAAGAATGATCACTTTAGAAAGTGAAAACGGAGACCTGAAGTGCAAACTCAGTTCATGCATTCCGGCATTCGTTTCATTGGTGGAT TCAATAGCATCACTGGAAAACCATGCTCTTTCACGAACAATAGTTCCTGAAGCTGAGAATCACCAACCAGAGTCACATGAGGAATCGTATGACCAGATAA GCAAAGACCAAAGTGCAGCGTTTTTGGACCACCAGCTGCTACAACAAAGAATCAGAGCAATTGAAAAGGAAGTTATGGAAAAGGAGAGATTGAGCATGCT TGAAAGCATAACTGCAAACAGCAAGCTGGAGGCTGCCATGAGAGAGATCGAAGAGTTGAAATCTGGAAGCAGCTTGACTGTCGTTGCAAATGGCGTTGAT TCGAAAACAGGATCTGGATGGCGAACACATTCGGAAGATGGAAGTGAAGTGATGACAAAAGACATAATACTGGATCATGACGGTAGCATCCACATGACTG TTGGAAAAGTTCCTTCATCTGGTCGAATGAGACATAGCCGAGATAATCCCTCTGCAGAATCGCTACGGTTCGAGAAAGAAGTTGTATCCTACGACAAGCT AGACATCTTCTCAGGCTCCTGTCAAGAATCAATTAACTCAAGAAAGGTTCTGGAAAGACTGGAGTCCGACGCTCGGAAGCTGTCGAACCTTGAGATCATC GTGCAAGAGTTAAGAAAGAAGGAGGATGTTGACGAGAAGAGCAGAAAGAAGAAGAAAGGGAAAGGAATAGAGTACGAGATTGTCAAAGAACAGTTGGATG AATCTGAAGAAACCATCATGGAGTTGTTTGATCAGAACCGGGAGCTGGCTAAGAGCATTGAGAATGAACCAGCGGCCATGGATGATCATGACGATGAAAA GAAGAGGAAAATGTCAGAAGAAGCTAGAAGAGGATCGGAGAAGATCGGGAGATTGACGCTGGAGCTGCAGAAGCTACAGTTTGTTTTAATGAAGTTGGAC GGAGGTGATGAATACAAGAGTGAAGAAGGGAGACGTAGAGTTATGCTTCGTGATTATCTGTATGGACTAAGGAGCATGAGCCCGAAGAGGAAGACGAAGA AGTCTCGTTTCTGTTCTTGTATGCAGCAGCCTGCAACAAGAGGAGATTGA
AA sequence Show only first row Show all	>Lus10006896 pacid=23142107 polypeptide=Lus10006896 locus=Lus10006896.g ID=Lus10006896.BGIv1.0 annot-version=v1.0 MTARAKSTRMYSWWWDSHISPKNSKWLQENLTDMDSNVKKMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHYHLTMAK EFPNQSQCSLGDDSLAGLVVDCDPCTPDLPSLRAFLDPDELEKDDLDVSPSQYYTAKGSGGFTEGARSVCSRKSVKHFSEMFGSGDAGVRKGLNFDDAGD KKRNGSVETKTRGPSDSDQMAKAEQEILTLKNALAKLEGEKEADLLQYQQSMERLTSLESEVSRAREGSLGLSGRASKAEAEVQMLMQSLAKLESEKEIN FLQYQQYQDKISNLEKNVSCAEQNMGELSERASKSETEVLSLKEDLATIGAEKESALFQYKQCLERISDLQSKLLQAEEDAMTCKRRAEMAEEEVERLKQ ALEKLTEENEATAVRFQQCLDSIQTLEHKLKCAEEETQRLNSVIDDGVSKLRGAEDKCIMLERSNQTMTSELESLSQKMEAQNMELTDKQKELGEVWTSM QEEHLRFVEAETVFQTLQDLHSQSQEELRTLGAELQSRVQILEDLEARNYSLETEVRQFELVNKSLTEVNLSSALMLQSLKDEMSSLRELIGKLEAEIER RVDQRNALQQEIYCLKEELNDLNKNHHTIKEQVESVGLNPECISSSVRDLQNENAKLKEDHERSKSERLVLIEKLEVMEKLMEKNSFLENSLSDLNVELD GAREMVKKLEATCQCLLGEKTTLVSEKAALDYQLETVTNNSEKLTEENNILETSLLDANAELDRLRERINSLEALCLLLKSQKSDLSTVKASLTSQSEVT QKRMEDLERSYGSLEERHSALETEKESMLLEVKELQTSLESGKQEHSRLVSQSESQLAGMTSQIKLLEEETHRTEKEFEEELDKAIASQIEIFVLQRCIQ DVEENHSSLLLECQALLATSKRYEEVVSALEEENLEQKEEVRFLSDQLTTLRLGIFRIAKILGVDINCWRKDETGFLRQVLKRLNGTQELLLNTNEENQQ LFIEKSVLATLLSGLQIEVANLVMTQRIILEDEKRQLRKELEDLKSKYEEVEARLASQERQLIKLSGDFGQQSREVNSIHGLKTELESQLRRSRVELVEM MNLKTNVSNKLQKVTNDAEQWESQAVIFLRELQISVVREGLFEGKVRELIEACRSFELSIFAKDTEIGQLKERMITLESENGDLKCKLSSCIPAFVSLVD SIASLENHALSRTIVPEAENHQPESHEESYDQISKDQSAAFLDHQLLQQRIRAIEKEVMEKERLSMLESITANSKLEAAMREIEELKSGSSLTVVANGVD SKTGSGWRTHSEDGSEVMTKDIILDHDGSIHMTVGKVPSSGRMRHSRDNPSAESLRFEKEVVSYDKLDIFSGSCQESINSRKVLERLESDARKLSNLEII VQELRKKEDVDEKSRKKKKGKGIEYEIVKEQLDESEETIMELFDQNRELAKSIENEPAAMDDHDDEKKRKMSEEARRGSEKIGRLTLELQKLQFVLMKLD GGDEYKSEEGRRRVMLRDYLYGLRSMSPKRKTKKSRFCSCMQQPATRGD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G03080			kinase interacting (KIP1-like)...		Lus10006896 [exp]	0	1
AT1G69840			SPFH/Band 7/PHB domain-contain...		Lus10037213 [exp]	2.4	0.8476
AT3G09830			Protein kinase superfamily pro...		Lus10026523 [exp]	3.6	0.7830
AT1G09970		RLK7, LRRXI-23 ...	receptor-like kinase 7, Leucin...		Lus10028232 [exp]	3.7	0.7955
AT1G72470		ATEXO70D1	exocyst subunit exo70 family p...		Lus10013163 [exp]	5.7	0.8427
AT3G03800		ATSYP131, SYP13...	syntaxin of plants 131 (.1)		Lus10015121 [exp]	8.5	0.8034
AT4G21390		B120	S-locus lectin protein kinase ...		Lus10009631 [exp]	9.5	0.7758
AT3G07040		RPS3, RPM1	RESISTANCE TO PSEUDOMONAS SYRI...		Lus10028639 [exp]	9.6	0.8205
AT5G66900			Disease resistance protein (CC...		Lus10034761 [exp]	9.8	0.8358
AT4G36980			unknown protein		Lus10019346 [exp]	11.3	0.7922
AT3G23280		XBAT35	XB3 ortholog 5 in Arabidopsis ...		Lus10009674 [exp]	15.6	0.7838

Compare expression of checked genes

Lus10006896 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.